| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,773,965 | A→T | 6.9% | T209S (ACA→TCA) | PP_5743 → | TonB‑dependent receptor protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,773,965 | 0 | A | T | 6.9% | 317.8 / 11.4 | 102 | T209S (ACA→TCA) | PP_5743 | TonB‑dependent receptor protein |
| Reads supporting (aligned to +/- strand): ref base A (49/46); new base T (3/4); total (52/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.13e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.12e-01 | |||||||||||
Only 100 of 104 total aligned reads displayed.
GACGCCCAAGGTTGCCGAGCAGGGCGACAACCACCATGGGGAGCTGCAACTCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCGGGCAGGTCCAGCAACTGTTGCTGCACTTCGCTCTCGGCCTTTTCTAC > NC_002947/3773820‑3774114 | gACGCCCAAGGTTGCCGAGCAGGGCGACAACCACCATGGGGAGCTGCAACTCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATg < 2:964419/150‑1 (MQ=255) aCGCCCAAGGTTGCCGAGCAGGGCGACAACCACCATGGGGAGCTGCAACTCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATgg < 2:1416693/150‑1 (MQ=255) cccAAGGTTGCCGAGCAGGGCGACAACCACCATGGGGAGCTGCAACTCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCg > 1:1028345/1‑150 (MQ=255) ccAAGGTTGCCGAGCAGGGCGACAACCACCATGGGGAGCTGCAACTCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATgg > 2:2372086/1‑146 (MQ=255) ccAAGGTTGCCGAGCAGGGCGACAACCACCATGGGGAGCTGCAACTCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATgg < 1:2372086/146‑1 (MQ=255) ccAAGGTTGCCGAGCAGGGCGACAACCACCATGGGGAGCTGCAACTCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGCGCCCATGTCATGGGcac < 2:2305306/150‑3 (MQ=255) aaGGTTGCCGAGCAGGGCGACAACCACCATGGGGAGCTGCAACTCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGTCATGGGcacgt < 1:2087301/150‑5 (MQ=255) aaGGTTGCCGAGCAGGGCGACAACCACCATGGGGAGCTGCAACTCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACAt > 1:1089916/1‑142 (MQ=255) aaGGTTGCCGAGCAGGGCGACAACCACCATGGGGAGCTGCAACTCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACAt < 2:1089916/142‑1 (MQ=255) aaGGTTGCCGAGCAGGGCGACAACCACCATGGGGAGCTGCAACTCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCt < 1:443671/150‑1 (MQ=255) gCCGAGCAGGGCGACAACCACCATGGGGAGCTGCAACTCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATAc < 1:2225987/150‑1 (MQ=255) gCCGAGCAGGGCGACAACCACCATGGGGAGCTGCAACTCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATAc < 1:1868086/150‑1 (MQ=255) aGGGCGACAACCACCATGGGGAGCTGCAACTCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGCGCCCATGTCATGGGcacgt > 2:839844/1‑133 (MQ=255) aGGGCGACAACCACCATGGGGAGCTGCAACTCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGCGCCCATGTCATGGGcacgt < 1:839844/137‑5 (MQ=255) ggCGACAACCACCATGGGGAGCTGCAACTCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGt > 2:1783126/1‑150 (MQ=255) aCAACCACCATGGGGAGCTGCAACTCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCt > 2:583679/1‑150 (MQ=255) aaCCACCATGGGGAGCTGCAACTCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTgg > 2:859332/1‑150 (MQ=255) accaccATGGGGAGCTGCAACTCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGgt < 2:2051405/150‑1 (MQ=255) caccaTGGGGAGCTGCAACTCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATgg > 1:569399/1‑120 (MQ=255) caccaTGGGGAGCTGCAACTCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATgg < 2:569399/120‑1 (MQ=255) caccaTGGGGAGCTGCAACTCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGgtgt > 1:116555/1‑150 (MQ=255) caccaTGGGGAGCTGCAACTCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGgtgt < 2:307482/150‑1 (MQ=255) caccaTGGGGAGCTGCAACTCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTATCTGgtgt > 2:1310722/1‑150 (MQ=255) accaTGGGGAGCTGCAACTCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCt < 2:1202063/144‑1 (MQ=255) accaTGGGGAGCTGCAACTCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCt > 1:1202063/1‑144 (MQ=255) ccaTGGGGAGCTGCAACTCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTaa < 2:2123666/150‑1 (MQ=255) caTGGGGAGCTGCAACTCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAAc > 2:1521148/1‑150 (MQ=255) ggggAGCTGCAACTCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGt > 1:410912/1‑150 (MQ=255) tGCAACTCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGc > 1:1313322/1‑150 (MQ=255) cAACTCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAg > 2:1864998/1‑150 (MQ=255) aCTCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTg > 1:2425726/1‑129 (MQ=255) aCTCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTg < 2:2425726/129‑1 (MQ=255) tCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTg > 1:1699006/1‑150 (MQ=255) tCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTg > 1:2142226/1‑150 (MQ=255) ccGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCAAGGTTTCTGGTGTAACGGTCTGTCGCAGCCTgcgc < 2:2404697/150‑1 (MQ=255) gggcAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCgcggcg < 1:2240730/149‑1 (MQ=255) gcAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTa > 2:1208948/1‑150 (MQ=255) aGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAAt < 1:2306940/150‑1 (MQ=255) ttCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACCACCACACGTCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGc < 2:71923/150‑1 (MQ=255) gCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTAAAGAATCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAg > 1:1636372/1‑150 (MQ=255) ggCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCgcgg > 1:648354/1‑133 (MQ=255) ggCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCgcgg < 2:648354/133‑1 (MQ=255) ggCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGt < 1:859332/150‑1 (MQ=255) ccACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTgg > 1:1141811/1‑104 (MQ=255) ccACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTgg < 2:1141811/104‑1 (MQ=255) cACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGgt > 1:827764/1‑104 (MQ=255) cACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGgt < 2:827764/104‑1 (MQ=255) atcGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAg > 2:1073249/3‑150 (MQ=255) aCCGAACAAGCCAGCCTGATTGGCCGCGAATGCGATTTCGACTACCACACCCCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAg < 1:815867/150‑1 (MQ=255) aCCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAg > 2:2288859/1‑150 (MQ=255) gAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGttt < 1:1591727/95‑1 (MQ=255) gAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGttt > 2:1591727/1‑95 (MQ=255) agccagccTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGa < 1:1853957/150‑1 (MQ=255) gccagccTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGAc > 1:1503097/1‑150 (MQ=255) ccagccTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACt > 1:741339/1‑150 (MQ=255) gccTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTAc < 1:491765/150‑1 (MQ=255) ccTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTaa < 2:1146681/120‑1 (MQ=255) ccTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTaa > 1:1146681/1‑120 (MQ=255) gATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAAc > 2:2150185/1‑91 (MQ=255) ggCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCCCGCCATCTGGTGGAACGGGCGGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTcgc > 1:2121510/1‑150 (MQ=255) gCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTcgcg < 1:844946/150‑1 (MQ=255) ccGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCgg < 2:116555/150‑1 (MQ=255) ccGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCgg > 1:561633/1‑150 (MQ=255) cgcgAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCggg > 1:2213363/1‑150 (MQ=255) cgcgAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTCGTGTAACGGTCTGTCCGTTCCTGTGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCggg < 1:888080/150‑1 (MQ=255) cgAGGGCGATGTCGACGACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGGAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCGGGCa < 2:428295/150‑1 (MQ=255) cgAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCGGGCa < 1:1377817/150‑1 (MQ=255) aaGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGAt < 1:751262/124‑1 (MQ=255) aaGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGAt > 2:751262/1‑124 (MQ=255) ggCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCGGGCAGGTc < 2:805461/150‑1 (MQ=255) gCGATTTCGACTACCACACACCCAGGTACCTCCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCGGGCAGGTcc > 1:62750/1‑150 (MQ=255) cGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCGGGCAGGTCCa < 2:1699006/150‑1 (MQ=255) gATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGc < 2:915124/88‑1 (MQ=255) aTTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTTTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCGGGCAGGTCCAGc > 2:325874/1‑150 (MQ=255) tttCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCGGGCAGGTCCAGcc > 2:753981/1‑149 (MQ=255) tCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCGGGCAGGTCCAGCAAc < 1:1521148/150‑1 (MQ=255) tCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCGGGCAGGTCCAGCAAc < 2:741339/150‑1 (MQ=255) cGACTACCACACACCCAGGCACGTGCCCATGACATGTGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCTGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCGGGCAGGTCCAGCAACt < 1:110711/150‑1 (MQ=255) gACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCGGGCAGGTCCAGCAACTg > 2:1860420/1‑150 (MQ=255) gACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCGGGCAGGTCCAGCAACTg > 2:1815080/1‑150 (MQ=255) tACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCGGGCAGGTCCAGCAACTGTtg > 1:2418738/1‑150 (MQ=255) aCCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCGGGCAGGTCCAGCAACTGTtgc < 2:2213363/150‑1 (MQ=255) ccACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCGGGCAGGTCCAGCAACTGTtgct < 2:561633/150‑1 (MQ=255) cacacaCCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCGGGCAGGTCCAGCAACTGTtgctg > 1:1803783/1‑150 (MQ=255) acacCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGGGTAACGGGCTGTCGCAGACTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCGGGCAGGTCCAGCAACTGTTGCTGCAc > 1:484806/1‑150 (MQ=255) acCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCGGGCAGGTCCAGCAACTGTTGCTGCACtt < 2:1908032/150‑1 (MQ=255) cccAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGATTAGCAGTGCAGATCGTGGACTTACCCGGTCGCGGGCAGGTCCAGCAACTGTTGCTGCACTTc < 2:1313322/150‑1 (MQ=255) ccAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCGGGCAGGTCCAGCAACTGTTGCTGCACTTCg > 2:2184960/1‑150 (MQ=255) ccAGGCACGTGCCCATCACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCGGGCAGGTCCAGCAACTGTTGCTGCACTTCg > 2:147432/1‑150 (MQ=255) cAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTAGCAGCCTGCCAAATTCAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCGGGCAGGTCCAGCAACTGTTGCTGCACTTCGc > 1:1484291/1‑150 (MQ=255) cAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGGGTAACGGTCTGTCGCAGCCGTCGCGGCGTCATGGGTTAGGAGTGCAGATCGTGGACTTACCCGGTCGCGGGCAGGTCCAGCAACTGTTGCTGCACTTCGc > 1:767395/1‑150 (MQ=255) agacgCCCATGTCATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCGGGCAGGTCCAGCAACTGTTGCTGCACTTCGCTCTCg > 2:137669/5‑150 (MQ=255) acgCCCATGTCATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCGGGCAGGTCCAGCAACTGTTGCTGCACTTCGCTCTCGGc > 1:1837703/3‑150 (MQ=255) cccATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCGGGCAGGTCCAGCAACTGTTGCTGCACTTCGCTCTCGGCCtt < 2:2121510/150‑1 (MQ=255) ccATGTCATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCGGGCAGGTCCAGCAACTGTTGCTGCACTTCGCTCTCGGCCttt < 2:1837703/150‑1 (MQ=255) ccATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCGGGCAGGTCCAGCAACTGTTGCTGCACTTCGCTCTCGGCCttt > 1:1148070/1‑150 (MQ=255) cATGACATGGGCGTCTGCATACTGCGACGGTTTGTGGTGTAAGGGGGTGTTGCAGACTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCGGGCAGGTCCAGCAACTGTTGCTGCACTTCGCTCTCGGCCtttt > 1:2263381/1‑150 (MQ=255) cATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCGGGCAGGTCCAGCAACTGTTGCTCCACTTCGCTCTCGGCCtttt < 1:1208948/150‑1 (MQ=255) aCATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATTGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCGGGCAGGTCCAGCAACTGTTGCTGCACTTCGCTCTCGGCCTTTTCTAc > 2:1399797/1‑150 (MQ=255) aCATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTCCCGATCGTGGACTTACCCGGTAGCGTGCAGGTCCAGCAACTGTTGCTGCACTTCGCTCTCGGCCTTTTCTAc < 1:1864998/150‑1 (MQ=255) | GACGCCCAAGGTTGCCGAGCAGGGCGACAACCACCATGGGGAGCTGCAACTCACCGGCGGCAGCTTCCGCACGGCCACCGAACAAGCCAGCCTGATTGGCCGCGAAGGCGATTTCGACTACCACACACCCAGGCACGTGCCCATGACATGGGCGTCTGCATACTGCCACGGTTTCTGGTGTAACGGTCTGTCGCAGCCTGCGCGGCGTAATGGCTTAGCAGTGCAGATCGTGGACTTACCCGGTCGCGGGCAGGTCCAGCAACTGTTGCTGCACTTCGCTCTCGGCCTTTTCTAC > NC_002947/3773820‑3774114 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |