Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 3,786,374 | A→G | 7.1% | L293P (CTG→CCG) | mhpT ← | 3‑(3‑hydroxy‑phenyl)propionate transporter MhpT |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 3,786,374 | 0 | A | G | 7.1% | 339.2 / 10.2 | 113 | L293P (CTG→CCG) | mhpT | 3‑(3‑hydroxy‑phenyl)propionate transporter MhpT |
Reads supporting (aligned to +/- strand): ref base A (55/50); new base G (3/5); total (58/55) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.82e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.53e-01 |
Only 100 of 115 total aligned reads displayed.
GCGCACCTGGGTCGAATACAGCGTCGGCGCCAGCGCGTACAGCACCAACTGGCCACCAATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACAGAATCTGCACGGCGCCCGCCTGCGGCCGGCTGAAGCCTTGGCCGATCAA > NC_002947/3786235‑3786522 | gcgcACCTGGGTCGAATACAGCGTCGGCGCCAGCGCGTTCAGCACCAACTGGCCACCAATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGc > 2:1838059/1‑150 (MQ=255) gcgcACCTGGGTCGAATACAGCGTCGGCGCCAGCGCGTACAGCACCAACTGGCCACCAATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGc > 1:2356516/1‑150 (MQ=255) gcACCTGGGTCGAATACAGCGTCGGCGCCAGCGCGTACAGCACCAACTGTCCACCAATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCAGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGt > 2:58727/1‑150 (MQ=255) cACCTGGGTCGAATACAGCGTCGGCGCCAGCGCGTACAGCACCAACTGGCCACCAATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCGGCATGCTGGCGtc < 2:2061819/150‑2 (MQ=255) cACCTGGGTCGAATACAGCGTCGGCGCCAGCGCGTACAGCACCAACTGGCCACCAATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTa < 1:1105932/150‑1 (MQ=255) aCCTGGGTCGAATACAGCGTCGGCGCCAGCGCGTACAGCACCAACTGGCCACCAATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAg < 1:1468289/150‑1 (MQ=255) aCCTGGGTCGAATACAGCGTCGGCGCCAGCGCGTACAGCACCAACTGGCCACCAATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAg < 1:2266659/150‑1 (MQ=255) aCCTGGGTCGAATACAGCGTCGGCGCCAGCGCGTACAGCACCAACTGGCCACCAATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAg < 1:2230212/150‑1 (MQ=255) aCCTGGGTCGAATACAGCGTCGGAGCGGCAATGTACAGCACCAACTGGCCACCAATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAg > 1:663990/1‑150 (MQ=255) ccTGGGTCGAATACAGCGTCGGCGCCAGCGCGTACAGCACCAACTGGCCACCAATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCGGCATGCTGGCGtcgt < 2:560312/150‑4 (MQ=255) gggTCGAATACAGCGTCGGCGCCAGCGCGTACAGCACCAACTGGCCACCAATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGa > 2:868279/1‑150 (MQ=255) ggctggAAGACAGCGTCGGCGCAAGCGCGTACAGCACCAACTGGCCACCAATGGCGCAATACCCGGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGa < 2:544552/145‑1 (MQ=255) tCGAATACAGCGTCGGCGCCAGCGCGTACAGCACCAACTGGCCACCAATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCa > 2:1000661/1‑150 (MQ=255) tCGAATACAGCGTCGGCGCCAGCGCGTACAGCACCAACTGGCCACCAATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCa > 1:2135606/1‑150 (MQ=255) gAATACAGCGTCGGCGCCAGCGCGTACAGCACCAACTGGCCACCAATGGCGCAATATCCATCAGTGAACCCGGCCAGTAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCTTAGTCGATCAAt < 1:982863/150‑1 (MQ=255) aaTACAGCGTCGGCGCCAGCGCGTACAGCACCAACTGGCCACCAATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATa > 2:375024/1‑150 (MQ=255) aTACAGCGTCGGCGCCAGCGCGTACAGCACCAACTGGCCACCAATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATAc > 1:1436538/1‑150 (MQ=255) aCAGCGTCGGCGCCAGCGCGTACAGCACCAACTGGCCACCAATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATAccg < 2:1893021/150‑1 (MQ=255) aCAGCGTCGGCGCCAGCGCGTACAGCACCAACTGGCCACCAATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATAccg > 2:2440542/1‑150 (MQ=255) cAGCGTCGGCGCCAGCGCGTACAGCACCAACTGGCCACCAATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCCACTTCGCCAGCATGCCGGCGTAGGCGATCAATAccgc < 1:1773361/150‑1 (MQ=255) cAGCGTCGGCGCCAGCGCGTACAGCACCAACTGGCCACCAATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATAccgc < 2:2225694/150‑1 (MQ=255) cAGCGTCGGCGCCAGCGCGTACAGCACCAACTGGCCACCAATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATAccgc < 2:1682159/150‑1 (MQ=255) ccAGCGCGTACAGCACCAACTGGCCACCAATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCaa > 1:761006/1‑150 (MQ=255) cAGCGCGTACAGCACCAACTGGCCACCAATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCaaa > 1:1768346/1‑150 (MQ=255) aGCGCGTACAGCACCAACTGGCCACCAATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAAc < 1:868279/150‑1 (MQ=255) gcgTACAGCACCCACTGGCCACCAATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGgcgggcggtattgatcgcctacgccggcatgctgg < 1:343929‑M1/150‑36 (MQ=255) gTACAGCACCAACTGGCCACCAATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCcgcg > 2:441103/1‑150 (MQ=255) aGCACCAACTGGCCACCAATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTcc < 1:2329318/150‑1 (MQ=255) gCACCAACTGGCCACCAATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAACCTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCca < 1:834483/150‑1 (MQ=255) aCCAACTGGCCACCAATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCcatc > 2:656734/1‑150 (MQ=255) cAACTGGCCACCAAGGGCGCAATACCCTGCATGGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCcatcat < 2:137367/150‑1 (MQ=255) tGGCCACCAATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGa < 1:1584198/150‑1 (MQ=255) caccaATGGCGCAATACCCTGCAGTGAACCCGGCCAGCATCATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGgcgggcggtattgatcgcctacgccggcatgctggcgtc > 1:187802‑M1/1‑96 (MQ=255) caccaATGGCGCAATACCCTGCAGTGAACCCGGCCAGCATCATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGgcgggcggtattgatcgcctacgccggcatgctggcgtc < 2:187802‑M1/135‑40 (MQ=255) caccaATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAAt < 1:363007/110‑1 (MQ=255) caccaATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAAt > 2:363007/1‑110 (MQ=255) caccaATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCcatca < 1:1812958/141‑1 (MQ=255) accaATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGt > 1:1581508/1‑150 (MQ=255) aaTGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCcc > 1:1818878‑M2/1‑115 (MQ=255) aaTGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCcc < 2:1818878‑M2/117‑3 (MQ=255) aaTGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAg > 1:2009559/1‑150 (MQ=255) ggCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGaa < 2:2009559/150‑1 (MQ=255) gcAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGa < 2:761006/150‑1 (MQ=255) cAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGAt > 1:2319409/1‑150 (MQ=255) cTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAgccg > 2:1576591/1‑150 (MQ=255) cTGCAGTGAACCCGGCAAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCcg > 2:627346/1‑113 (MQ=255) gCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCCGTCAGGAACGATCCAgccgcc < 1:55782/150‑1 (MQ=255) gTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGTTCCATCATCCGACCGGTCAg < 1:1310990/131‑1 (MQ=255) gTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGAc > 1:1624599/1‑124 (MQ=255) gTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGAc < 2:1624599/124‑1 (MQ=255) ccGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAgg < 1:1838059/150‑1 (MQ=255) ccGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAgg > 1:1034985/1‑150 (MQ=255) ccGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAgg < 1:2355312/150‑1 (MQ=255) cAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGaa < 2:902321/150‑1 (MQ=255) aGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGaa < 1:181911/149‑1 (MQ=255) aGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGaa > 2:181911/1‑149 (MQ=255) aGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAAc > 1:1079615/1‑150 (MQ=255) gCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACa > 2:1673328/1‑150 (MQ=255) cAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACAg > 1:1835460/1‑150 (MQ=255) cAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACAg > 2:534928/1‑150 (MQ=255) aaCATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCGGCATGCTGGCGtcgt > 1:726165/1‑61 (MQ=37) aaCATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCGGCATGCTGGCGtcgt < 2:726165/64‑4 (MQ=37) aaCATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACAGa < 1:12774/150‑1 (MQ=255) aCATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACAGaa > 2:1557797/1‑150 (MQ=255) aCATCAGACCGAAACTCCGCGACAGCCCCAGCCCCGCCAACGACGCCATCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGGGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACAGaa < 1:1951366/150‑1 (MQ=255) cATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCaa < 2:1710230/69‑1 (MQ=255) cATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCaa > 1:1710230/1‑69 (MQ=255) tCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACAGAATCt > 2:739219/1‑150 (MQ=255) cAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACAGAATCTg > 1:1409309/1‑150 (MQ=255) gCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACAGAATCTGCa < 2:2319409/150‑1 (MQ=255) cccGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATcc < 2:1201644/117‑1 (MQ=255) cccGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATcc > 1:1201644/1‑117 (MQ=255) cccGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACAGAATCTGCAc < 1:375024/150‑1 (MQ=255) cccGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACAGAATCTGCAc < 2:2135606/150‑1 (MQ=255) cGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACAGAATCTGCACgg > 2:864259/1‑150 (MQ=255) aaCTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACAGAATCTGCACGgcgc < 1:441103/150‑1 (MQ=255) tGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACAGAATCTGCACGGcgcccg > 1:2129528/1‑150 (MQ=255) tGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACAGAATCTGCACGGcgcccg > 1:666934/1‑150 (MQ=255) tGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACAGAATCTGCACGGcgcccg > 2:396733/1‑150 (MQ=255) gACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGAGCTCGCGTCTTCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACAGAATCTGCACGGCGCCCGCCTGc < 2:663990/150‑1 (MQ=255) cagccccagcccCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAAGAACGATCCAGCCGCCCCACCCAGGTTGAACAGAATCTGCACGGCGCCCGCCTGcgg > 1:1345769/1‑150 (MQ=255) ccagccccGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACAGAATCTGCACGGCGCCCGCCTGcggccggc > 2:234211/1‑150 (MQ=255) cagccccGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACAGAATCTGCACGGCGCCCGCCTGCGGCCGGCt < 1:656734/150‑1 (MQ=255) cccGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCTGCCCTCGTACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACAGAATCTGCACGGCGCCCGCCTGCGGCCGGCTGAAg < 1:1000661/150‑1 (MQ=255) cGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACAGAATCTGCACGGCGCCCGCCTGCGGCCGGCTGAAGcc > 1:2165091/1‑150 (MQ=255) cGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACAGAATCTGCACGGCGCCCGCCTGCGGCCGGCTGAAGcc > 1:450496/1‑150 (MQ=255) ccAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACAGAATCTGCACGGCGCCCGCCTGCGGCCGGCTGAAGCCtt < 2:1034985/150‑1 (MQ=255) ctacgCCGGCATGCTGGCGTCGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACAGAATCTGCACGGCGCCCGCCTGCGGCCGGCTGAAGc > 2:1056756/3‑143 (MQ=255) ctacgCCGGCATGCTGGCGTCGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACAGAATCTGCACGGCGCCCGCCTGCGGCCGGCTGAAGc < 1:1056756/141‑1 (MQ=255) gacgCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCccggcatgctggcgtcgttggcggggctggggctgtcgagcagtttcgggctgatgatgctggccgggttcactgcagggtattgcgccattggtg > 1:187802‑M2/1‑39 (MQ=255) gacgCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCccggcatgctggcgtcgttggcggggctggggctgtcgagcagtttcgggctgatgatgctggccgggttcactgcagggtattgcgccattggtg < 2:187802‑M2/135‑97 (MQ=255) gCCAGCATGCCGGCGTAGGCGGTCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACAGAATCTGCACGGCGCCCGCCTGCGGCCGGCTGAAGCCTTGGCCGATc > 1:1573326/1‑150 (MQ=255) gCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACAGaa > 1:91274/1‑106 (MQ=255) gCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACAGAATCTGCACGGCGCCCGCCTGCGGCCGGCTGAAGCCTTGGCCGATc < 2:2129528/150‑1 (MQ=255) gCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACAGAATCTGCACGGCGCCCGCCTGCGGCCGGCTGAAGCCTTGGCCGATc < 1:2135755/150‑1 (MQ=255) gCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACAGAATCTGCACGGCGCCCGCCTGCGGCCGGCTGAAGCCTTGGCCGATc < 2:1835460/150‑1 (MQ=255) ccAGCATGCCGGCGTAGGCGATCAATACCGCCCGCccggcatgctggcgtcgttggcggggctggggctgtcgagcagtttcgggctgatgttgctggccgggttcactgcagggtattgcgccattggtggccagtgggtgctgtacgc < 1:343929‑M2/150‑116 (MQ=255) cAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACAGAATCTGCACGGCGCCCGCCTGCGGCCGGCTGAAGCCTTGGCCGATCaa < 1:1557797/150‑1 (MQ=255) aGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACAGAATCTGCACGGCGCCCGCCTGCGGCCGGCTGAAGCCtt < 2:2057228/139‑1 (MQ=255) aGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACAGAATCTGCACGGCGCCCGCCTGCGGCCGGCTGAAGCCtt > 1:2057228/1‑139 (MQ=255) | GCGCACCTGGGTCGAATACAGCGTCGGCGCCAGCGCGTACAGCACCAACTGGCCACCAATGGCGCAATACCCTGCAGTGAACCCGGCCAGCAACATCAGCCCGAAACTGCTCGACAGCCCCAGCCCCGCCAACGACGCCAGCATGCCGGCGTAGGCGATCAATACCGCCCGCCCGGCAAACCCGCGGTCCATCATCCGACCGGTCAGGAACGATCCAGCCGCCCCACCCAGGTTGAACAGAATCTGCACGGCGCCCGCCTGCGGCCGGCTGAAGCCTTGGCCGATCAA > NC_002947/3786235‑3786522 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |