| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,125,345 | A→T | 6.6% | intergenic (+30/+51) | PP_3628 → / ← PP_3629 | choline/carnitine/betaine transporter family protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,125,345 | 0 | A | T | 6.6% | 325.1 / 11.4 | 106 | intergenic (+30/+51) | PP_3628/PP_3629 | choline/carnitine/betaine transporter family protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (52/47); new base T (3/4); total (55/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.09e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.02e-01 | |||||||||||
Only 100 of 108 total aligned reads displayed.
GATCGAGAAGGCCGTACTGTATGGCGCGGTGAAGCATGGGGAGGAGTTCTACATTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAACGCCGCCGCTATCTTGGCCACATCGATCTTGCCCATCTGCATCATGGCCTCGAACGCACGCTTGGCCGCCGCACGGTCGGGGTGG > NC_002947/4125198‑4125492 | gATCGAGAAGGCCGTACTGTATGGCGCGGTGAAGCATGGGGAGGAGTTCTACATTGTGGTGCAG‑GAGAAGAAGGCCTCAGCAGAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGAC‑TGCTAag > 1:1613791/1‑150 (MQ=255)gATCGAGAAGGCCGTACTGTATGGCGCGGTGAAGCATGGGGAGGAGTTCTACATTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAag < 1:2067448/150‑1 (MQ=255)gATCGAGAAGGCCGTACTGTATGGCGCGGTGAAGCATGGGGAGGAGTTCTACATTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAag > 2:783647/1‑150 (MQ=255) aTCGAGAAGGCCGTACTGTATGGCGCGGTGAAGCATGGGGAGGAGTTCTACATTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAagc > 1:242279/1‑150 (MQ=255) aTCGAGAAGGCCGTACTGTATGGCGCGGTGAAGCATGGGGAGGAGTTCTACATTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAagc > 2:1388003/1‑150 (MQ=255) tCGAGAAGGCCGTACTGTATGGCGCGGTGAAGCATGGGGAGGAGTTCTACATTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAagca < 1:2103884/150‑1 (MQ=255) gagaAGGCCGTACTGTATGGCGCGGTGAAGCATGGGGAGGAGTTCTACATTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAagcagc < 2:1767531/150‑1 (MQ=255) gagaAGGCCGTACTGTATGGCGCGGTGAAGCATGGGGAGGAGTTCTACATTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAAACCAAAAACCACGAGC‑TGCTAagcagc < 2:2040427/150‑1 (MQ=255) ggCCGTACTGTATGGCGCGGTGAAGCATGGGGAGGAGTTCTACATTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTTAGCAGCCCGtg < 1:1511277/150‑2 (MQ=255) ggCCGTACTGTATGGCGCGGTGAAGCATGGGGAGGAGTTCTACATTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGtt > 1:2423139/1‑150 (MQ=255) gCCGTACTGTATGGCGCGGTGAAGCATGGGGAGGAGTTCTACATTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTaa < 2:1679146/139‑1 (MQ=255) gCCGTACTGTATGGCGCGGTGAAGCATGGGGAGGAGTTCTACATTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTaa > 1:1679146/1‑139 (MQ=255) cGTACTGTATGGCGCGGTGAAGCATGGGGAGGAGTTCTACATTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTcgc > 1:388493/1‑150 (MQ=255) cGTACTGTATGGCGCGGTGAAGCATGGGGAGGAGTTCTACATTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTcgc > 2:2092679/1‑150 (MQ=255) tACTGTATGGCGAGATGAGTCATGGGTAGGAGTTCTACATTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGa > 2:1166334/1‑150 (MQ=255) cTGTATGGCGCGGTGAAGCATGGGGAGGAGTTCTACATCGTGGTGCAG‑GAGGAGAGGGCATCGGCCGAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGGCAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATg > 2:533291/1‑150 (MQ=255) tATGGCGCGGTGAAGCATGGGGAGGAGTTCTACATTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCga > 1:1122070/1‑150 (MQ=255) tGGCGCGGTGAAGCATGGGGAGGAGTTCTACATTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCgaga < 1:783647/150‑1 (MQ=255) gcgcGGTGAAGCATGGGGAGGAGTTCTACATTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGAcc > 1:880242/1‑150 (MQ=255) gcgGTGAAGCATGGGGAGGAGTTCTACATTGTGGTGCAG‑GAGAAGCAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTTTTCCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACcgc < 1:1358174/150‑1 (MQ=255) gcgGTGAAGCATGGGGAGGAGTTCTACATTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACcgc < 1:1388003/150‑1 (MQ=255) gcgGTGAAGCATGGGGAGGAGTTCTACATTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACcgc < 2:1488684/150‑1 (MQ=255) gcgGTGAAGCATGGGGAGGAGTTCTACATCGCGGCCGAGCTACCGGAAAGC‑GCGATCAGGTCAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACcgc < 1:1741437/150‑1 (MQ=255) tGAAGCATGGGGAGGAGTTCTACATTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCct > 1:2221739/1‑150 (MQ=255) tGAAGCATGGGGAGGAGTTCTACATTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCct > 1:2200627/1‑150 (MQ=255) tGGGGAGGAGTTCTACATTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGGCGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGaaa < 2:1375564/150‑1 (MQ=255) tGGGGAGGAGTTCTACATTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCct < 2:842626/143‑1 (MQ=255) tGGGGAGGAGTTCTACATTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCct > 1:842626/1‑143 (MQ=255) tGGGGAGGAGTTCTACATTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGAC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGaaa < 2:1613791/150‑1 (MQ=255) gggAGGAGTTCTACATTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACa < 2:880242/150‑1 (MQ=255) gggAGGAGTTCTACATTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACa < 2:880250/150‑1 (MQ=255) gggAGGAGTTCTACATTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTAGCTGGGCGAGACCGCGCCTGCTGAAACa > 1:602909/1‑150 (MQ=255) ttCTACATTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGc > 2:922263/1‑121 (MQ=255) ttCTACATTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGc < 1:922263/121‑1 (MQ=255) ttCTACATTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTg > 1:607635/1‑150 (MQ=255) ttCTACATTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTg > 2:803692/1‑150 (MQ=255) ttCTACATTGTGGTGCAG‑GAGAAGAAGGCATCAGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGc < 1:271608/121‑1 (MQ=255) ttCTACATTGTGGTGCAG‑GAGAAGAAGGCATCAGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGc > 2:271608/1‑121 (MQ=255) actgtgGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCAATGGGAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCaa > 1:1880126/3‑150 (MQ=255) aTTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCaa > 1:352792/1‑150 (MQ=255) gtgCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAAGCCGCAACTGCCGGCGTCAACCCGCACACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCCCGCCTGCTGAAACATGGATCTGCTTCAACCTAcc > 2:203970/1‑150 (MQ=255) gtgCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTcc < 2:1929798/150‑1 (MQ=255) taG‑GAGAAGAAGGCATCGGGCAAGACAGCGGCAGAGGCCGAAGTAACGCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCGCGTTCGCGATGCGAGACCGCGTCTGCTGAAACATGGATCTGCTTCAACCTTCCAAc < 1:329667/149‑1 (MQ=255) cAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAAc > 2:1170772/1‑150 (MQ=255) cAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAAc < 1:803692/150‑1 (MQ=255) gagaAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTTagcagc < 2:270972/90‑1 (MQ=255) gagaAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTTagcagc > 1:270972/1‑90 (MQ=255) gagaAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTTAGCAGCCCGtg < 2:119258/95‑2 (MQ=255) gagaAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTTAGCAGCCCGtg > 1:119258/1‑94 (MQ=255) gaagaaGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAAcgccgc < 1:1166334/150‑1 (MQ=255) aagaagGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAAcgccgcc < 1:1480117/150‑1 (MQ=255) gaagGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAAcgccgccgc < 1:362955/150‑1 (MQ=255) gaagGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCATGCTGAAACATGGATCTGCTTCAACCTTCCAAcgccgccgc > 2:2245706/1‑150 (MQ=255) gccacgggCCAAGACAGCGGCAGAGGCCGAAGTAAGCCGCATCTGACGGCGTCAACACGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACTTGGATCTGCTTCAACCTTCCAATGCTGCCGCTAt < 2:817466/144‑1 (MQ=255) gCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAACGCCGCCGCTATc > 1:2449152/1‑150 (MQ=255) aTCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAACGCCGCCGCTATCtt > 1:785584/1‑150 (MQ=255) aTCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAACGCCGCCGCTATCtt < 1:632848/150‑1 (MQ=255) tCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAACGCCGCCGCTATCTTg < 2:785584/150‑1 (MQ=255) ggCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAACGCCGCCGCTATCTTGGc < 2:2423139/150‑1 (MQ=255) ggCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAACGCCGCCGCTATCTTGGc < 2:102866/150‑1 (MQ=255) ggCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAACGCCGCCGCTATCTTGGc < 1:2092679/150‑1 (MQ=255) gCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGa < 1:1765041/113‑1 (MQ=255) gCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGa > 2:1765041/1‑113 (MQ=255) gCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCtt > 1:1845141/1‑127 (MQ=255) gCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCtt < 2:1845141/127‑1 (MQ=255) gCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAACGCCGCCGCTATCTTGGcc > 2:1415265/1‑150 (MQ=255) ccAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGAc < 2:1104799/92‑1 (MQ=255) ccAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGAc > 1:1104799/1‑92 (MQ=255) aaGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTTAGCAGCCCGtg < 2:2340797/77‑2 (MQ=255) aaGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAAc > 2:680166/1‑129 (MQ=255) aaGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAAc < 1:680166/129‑1 (MQ=255) aCAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCCGCTTCAACCTTCCAACGCCGCCGCTATCTTGGCCACATCg > 2:1585543/1‑150 (MQ=255) gCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAACGCCGCCGCTATCTTGGCCACACCGATc > 2:80904/1‑150 (MQ=255) cAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAACGCCGCCGCTATCTTGGCCACATCGATCTTGc < 2:352792/150‑1 (MQ=255) cGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAACGCCGCCGCTATCTTGGCCACATCGATCTTGCCCATCTg > 2:1898255/1‑150 (MQ=255) gAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAACGCCGCCGCTATCTTGGCCACATCGATCTTGCCCATCTGc > 2:832240/1‑150 (MQ=255) aCCCGCAACTGACGGCGTCAACCCGAAACCAACGGACGAGCGATG‑GGCCCGTCTGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAACGCCGCCGCTATCTTGGCCACATCGATCTTGCCCATCTGCATCATg < 1:533291/150‑1 (MQ=255) aCCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAACGCCGCCGCTATCTTGGCCACATCGATCTTGCCCATCTGCATCATg < 2:1122070/150‑1 (MQ=255) ccGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAACGCCGCCGCTATCTTGGCCACATCGATCTTGCCCATCTGcatcat > 2:873977/1‑147 (MQ=255) ccGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAACGCCGCCGCTATCTTGGCCACATCGATCTTGCCCATCTGcatcat < 1:873977/147‑1 (MQ=255) ccGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAACGCCGCCGCTATCTTGGCCACATCGATCTTGCCCATCTGCATCATGGc > 2:2400159/1‑150 (MQ=255) cAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCa > 2:2235887/1‑98 (MQ=255) cAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCa < 1:2235887/98‑1 (MQ=255) tGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAACGCCGCCGCTATCTTGGCCACATCGATCTTGCCCATCTGCATCATGGCCTCGAac < 2:406207/150‑1 (MQ=255) gACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAACGCCGCCGCTATCTTGGCCACATCGATCTTGCCCATCTGCATCATGGCCTCGAacg < 2:602909/150‑1 (MQ=255) gCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAACGCCGCCGCTATCTTGGCCACATCGATCTTGCCCATCTGCATCATGGCCTCGAacgcacg < 1:264160/150‑1 (MQ=255) gacAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAACGCCGCCGCTATCTTGGCCACATCGATCTTGCCCATCTGCATCACGGCCTCGAACGCACGCt > 1:344062/3‑150 (MQ=255) gTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAACGCCGCCGCTATCTTGGCCACATCGATCTTGCCCATCTGCATCATGGCCTCGAACGCACGCt > 1:1086697/1‑150 (MQ=255) cAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAACGCCGCCGCTATCTTGGCCACATCGATCTTGCCCATCTGCATCATGGCCTCGAACGCACGCTTg < 1:2400159/150‑1 (MQ=255) aCCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAACGCCGCCGCTATCTTGGCCACATc < 1:1035928/108‑1 (MQ=255) aCCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAACGCCGCCGCTATCTTGGCCACATc > 2:1035928/1‑108 (MQ=255) aCCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAACGCCGCCGCTATCTTGGCCACACCGATCTTGCCCATCTGCATCAGGGCCTCGCACGCCCGCTTgcc > 2:848945/1‑148 (MQ=255) ccGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATg > 1:1312666/1‑62 (MQ=255) ccGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATg < 2:1312666/62‑1 (MQ=255) ccGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAACGCCGCCGCTATCTTGGCCACATCGATCTTGCCCATCTGCATCATGGCCTCGAACGCACGCTTGgccc > 1:810378/1‑149 (MQ=255) cACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAACGCCGCCGCTATCTTGGCCACATCGATCTTGCCCATCTGCATCATGGCCTCGAACGCACGCTTGGCCGCCGCACgg > 2:1304799/1‑150 (MQ=255) aCGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAACGCCGCCGCTATCTTGGCCACATCGATCTTGCCCATCTGCATCATGGCCTCGAACGCACGCTTGGCCGCCGCACGGt > 2:2326783/1‑150 (MQ=255) aCGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAACGCCGCCGCTATCTTGGCCACATCGATCTTGCCCATCTGCATCATGGCCTCGAACGCACGCTTGGCCGCCGCACGGt > 1:237762/1‑150 (MQ=255) c‑tgctAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAACGCCGCCGCTATCTTGGCCACATCGATCTTGCCCATCTGCATCATGGCCTCGAACGCACGCTTGGCCGCCGCACGGTCgggg < 1:1251833/150‑1 (MQ=255) tgctAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAACGCCGCCGCTATCTTGGCCACATCGATCTTGCCCATCTGCATCATGGCCTCGAACGCACGCTTGGCCGCCGCACGGTCGGGGt > 1:1579048/1‑150 (MQ=255) | GATCGAGAAGGCCGTACTGTATGGCGCGGTGAAGCATGGGGAGGAGTTCTACATTGTGGTGCAG‑GAGAAGAAGGCATCGGCCAAGACAGCGGCAGAGGCCGAAGTAACCCGCAACTGACGGCGTCAACCCGAAAACCACGGGC‑TGCTAAGCAGCCCGTTCGCGATGCGAGACCGCGCCTGCTGAAACATGGATCTGCTTCAACCTTCCAACGCCGCCGCTATCTTGGCCACATCGATCTTGCCCATCTGCATCATGGCCTCGAACGCACGCTTGGCCGCCGCACGGTCGGGGTGG > NC_002947/4125198‑4125492 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |