| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,162,143 | T→C | 10.0% | intergenic (‑43/+34) | PP_3663 ← / ← pssA | GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,162,143 | 0 | T | C | 10.0% | 240.4 / 13.9 | 90 | intergenic (‑43/+34) | PP_3663/pssA | GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (47/34); new base C (4/5); total (51/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.93e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.71e-01 | |||||||||||
AAGGCCCGACTGTATGCGATCGTGATCACGTTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGTTCGGCCTTCTCCCCCAGCGCCTCTGCCGAACCGAT > NC_002947/4161996‑4162290 | aaGGCCCGACTGTATGCGATCGTGATCACGTTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTgg > 2:530673/1‑150 (MQ=255)aaGGCCCGACTGTATGCGATCGTGATCACGTTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTgg < 1:1831132/150‑1 (MQ=255) gTATGCGATCGTGATCACGTTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGa < 2:1681566/150‑1 (MQ=255) tGCGATCGTGATCACGTTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGACCCTGTCGCCGGCAAGCCAGCGACAg < 1:1414466/150‑1 (MQ=255) gCGATCGTGATCACGTTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAgg > 2:224643/1‑150 (MQ=255) cGATCGTGATCACGTTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAggg < 1:540224/150‑1 (MQ=255) gATCGTGATCACGTTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGACCCTGTCGCCGGCAAGCCAGCGACAgggc < 2:1655721/150‑2 (MQ=255) aTCACGTTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACa < 1:2265620/150‑1 (MQ=255) tCACGTTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTgt > 1:1785/1‑124 (MQ=255) tCACGTTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTgg < 2:1785/125‑1 (MQ=255) tCACGTTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAg > 1:464100/1‑150 (MQ=255) cACGTTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAgg > 1:1194456/1‑150 (MQ=255) gTTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGa > 2:142609/1‑150 (MQ=255) gTTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGa < 1:2250811/150‑1 (MQ=255) gTTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCCGGCAAGCCAGCGACAgg > 2:339415/1‑136 (MQ=255) gTTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCCGGCAAGCCAGCGACAgg < 1:339415/136‑1 (MQ=255) ttCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGAt > 2:957038/1‑150 (MQ=255) agGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGACCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCag < 2:1047478/150‑1 (MQ=255) gggCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGGACAGGCGATGTCagag > 1:41852/1‑150 (MQ=255) gggCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGAAAAAAGAACCTTAAGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCagag < 1:1861192/150‑1 (MQ=255) ccTTGCACTGTTGCCTGCACATTGTAATCCATCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGAt < 1:2231345/140‑1 (MQ=255) ccTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGTCGACAGGGTCAGTACAGGCGAt > 2:2231345/1‑140 (MQ=255) ccTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CAc > 1:2320019/1‑150 (MQ=255) ttGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CAc > 2:131876/1‑148 (MQ=255) ttGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CAc < 1:131876/148‑1 (MQ=255) ttGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCCGGCAAGCCAGCGACAGGGCCAgag < 2:2233487/130‑3 (MQ=38) ttGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCCGGCAAGCCAGCGACAGGGCCAgag > 1:2233487/1‑128 (MQ=38) aCTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCtt > 2:1338930/1‑150 (MQ=255) aCTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCtt < 1:142609/150‑1 (MQ=255) gCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCaa < 2:464100/150‑1 (MQ=255) ccTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACTATGCATGCCCTGTCGCTGGCTTTCCGGCGACAGCGACAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAAc > 1:42580/1‑150 (MQ=255) cTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAAc > 2:2031808/1‑149 (MQ=255) cTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAAc < 1:2031808/149‑1 (MQ=255) cTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGCACAGGCGATGTCAGAG‑CACCCGCTTGATCAACg > 2:2371790/1‑150 (MQ=255) tGCACATTGTAATCCAGCCCCTTACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCACCgg < 2:103476/150‑1 (MQ=255) tGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACgg > 2:1160048/1‑150 (MQ=255) acaTTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTc < 2:41852/150‑1 (MQ=255) aTTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCa > 2:1859039/1‑150 (MQ=255) tCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCCGGCAAGCCAGCGACa < 1:1290640/96‑1 (MQ=38) tCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCCGGCAAGCCAGCGACa > 2:1290640/1‑96 (MQ=38) ccAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGGGCGCACCACTCTGGCCCTGTCGCTGTCTTGCCGGCGACAGGGTCAGGACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCta > 2:1465679/1‑150 (MQ=255) cAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTAAGAG‑CATCCGCTTGATCAACGGCTCCAACCGGCgat > 2:1721744/1‑150 (MQ=255) aGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCtata < 2:1700741/150‑1 (MQ=255) cccTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAgcg > 1:1042520/1‑150 (MQ=255) cccTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAgcg > 1:96995/1‑150 (MQ=255) ccTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAgcgc > 1:1656134/1‑150 (MQ=255) aaaGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGa < 2:1194456/150‑1 (MQ=255) aaaGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGa > 2:772795/1‑150 (MQ=255) aaGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGAc < 2:96995/150‑1 (MQ=255) gggCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGc > 2:1430948/1‑150 (MQ=255) cGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGaa > 2:1391125/1‑150 (MQ=255) ggCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACtt < 1:224643/150‑1 (MQ=255) ggCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACtt > 1:334306/1‑150 (MQ=255) cagcaATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTgc < 1:1859039/150‑1 (MQ=255) aaTATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAAGCGACGCAGAAACTTGCGCAc > 1:55718/1‑150 (MQ=255) tCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCActtgc > 2:2060038/1‑150 (MQ=255) aTAATGACATCAATGCGCGGTGCGCACCACTCTTGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGAGCTGTCAGAG‑CAGCAGCTGGAAAATCGCCACCAAGCTGCAAGAGCGCAACCGACGCAGAAACTAGCGCActtgctt > 2:1106121/1‑150 (MQ=255) aTAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCCcttgctt > 1:559935/1‑150 (MQ=255) tAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCActtgcttg < 1:772795/150‑1 (MQ=255) aCATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGATGAGAACAGGCGAT‑ACTGCGCCGCTCGCTGGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATg > 1:1484926/1‑150 (MQ=255) cATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAAc < 1:2310490/117‑1 (MQ=255) cATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAAc > 2:2310490/1‑117 (MQ=255) aTCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAACCTTGCGCCCTTGCTTGGGATGtt > 2:234308/1‑150 (MQ=255) aTCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCActtgcttg > 1:2363156/1‑143 (MQ=255) aTCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCActtgcttg < 2:2363156/143‑1 (MQ=255) aTCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGtt > 2:339615/1‑150 (MQ=255) aTCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCCTCAACCGGCTATAGCGCAACTGACGCAGAAACTTGCGCACTCGCCAGGGATGtt > 2:1773224/1‑150 (MQ=255) aaTGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGTTCgg > 2:783702/1‑150 (MQ=255) aTGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGTTCGGc < 1:1106121/150‑1 (MQ=255) aTGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGTTCGGc < 1:1430948/150‑1 (MQ=255) gcgcACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGTTCGGCCTTCTcccc < 1:783702/150‑1 (MQ=255) gcgcACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGTTCGGCCTTCTcccc < 2:334306/150‑1 (MQ=255) gcACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCCACGCAGAAACTTGTGCTGTTTCTTGGGTGGTGCGGCCTTCTCCCCCa > 2:260574/1‑150 (MQ=255) tctGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAAcc < 2:1711600/95‑1 (MQ=255) tctGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAAcc > 1:1711600/1‑95 (MQ=255) ctGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGTTCGGCCTTCTCCCCCAGCGCctct > 1:182529/1‑150 (MQ=255) ggCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGTTCGGCCTTCTCCCCCAGCGCCTCTGc < 2:42580/150‑1 (MQ=255) gCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGTTCGGCCTTCTCCCCCAGCGCCTCTGcc < 1:2060038/150‑1 (MQ=255) gCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTAAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCActtgcttg < 2:1695111/117‑1 (MQ=255) gCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTAAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCActtgcttg > 1:1695111/1‑117 (MQ=255) ccTGTCGCCGGCAAGCCAGCGACAGGGTCAGTACAGGCGATGTCAGCG‑AACACGCTTGATAAACGGCTCCAACCGGCTACAACGCAACCGACGCAGAAACTTTCGCACTTGCTTGGGATGTTCGGCCTTCTCCCCCAGCGCCTCTGCCGa > 2:2101390/1‑150 (MQ=255) tGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCTCAACCGACGCAGAAACTTGGGCACTTGCTTGGGATGTTCGGCCATCTCCCCCCGGTCCCATGCCGAAc > 1:490951/1‑150 (MQ=255) tGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCATAAACTTTCGCAGTTGCTTGGTATGGTCGCCCTTCTCCCCCAGCGCCTCTGCCGacc > 2:2342989/1‑148 (MQ=255) tGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGTTCGGCCTTCTCCCCCAGCGCCTCTGCCGAAc < 2:1656134/150‑1 (MQ=255) tGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGTTCGGCCTTCTCCCCCAGCGCCTCTGCCGAAc < 2:182529/150‑1 (MQ=255) gTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGTTCGGCCTTCTCCCCCAGCGCCTCTGCCGAAcc > 2:2109371/1‑150 (MQ=255) tCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGTTCGGCCTTCTccccc > 2:1450358/1‑132 (MQ=255) tCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGTTCGGCCTTCTccccc < 1:1450358/132‑1 (MQ=255) tCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGTTCGGCCTTCTCCCCCAGCGCCTCTGCCGAACCg > 2:933702/1‑150 (MQ=255) gCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGTTCGGCCTTCTCCCCCAGCGCCTCTGCCGAACCGAt > 2:1672332/1‑150 (MQ=255) | AAGGCCCGACTGTATGCGATCGTGATCACGTTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACAGGGTCAGTACAGGCGATGTCAGAG‑CACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGTTCGGCCTTCTCCCCCAGCGCCTCTGCCGAACCGAT > NC_002947/4161996‑4162290 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |