| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,221,233 | A→T | 10.8% | intergenic (+48/+214) | PP_3699 → / ← PP_3700 | hypothetical protein/chromosome partitioning ATPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,221,233 | 0 | A | T | 10.8% | 238.5 / 18.0 | 83 | intergenic (+48/+214) | PP_3699/PP_3700 | hypothetical protein/chromosome partitioning ATPase |
| Reads supporting (aligned to +/- strand): ref base A (38/36); new base T (5/4); total (43/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.98e-01 | |||||||||||
TTGCGTGCAACGTCGAGTTGACGCTGTTCACGCTGAAGATCCTGAAGCTTTGATCAGGGCTGATATGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAGCCACAATCTCATGCAACCGCTGCCGTACGAGTCGGCACAGTATTGCATCTCTAGCTCCGAGCATGCCCTGACATTTCCGC > NC_002947/4221089‑4221377 | ttGCGTGCAACGTCGAGTTGACGCTGTTCACGCTGCAGATCCTGAAGCTTTGATCAGGGCTGATATGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGAt < 1:502028/150‑1 (MQ=255)ttGCGTGCAACGTCGAGTTGACGCTGTTCACGCTGAAGATCCTGAAGCTTTGATCAGGGCTGATATGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTAAGGCGGCATCGGACAGAt > 2:15699/1‑150 (MQ=255) gCGTGCAACGTCGAGTTGACGCTGTTCACGCTGAAGATCCTGAAGCTTTGATCAGGGCTGATATGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGTAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGc > 1:537688/1‑150 (MQ=255) gTGCAACGTCGAGTTGACGCTGTTCACGCTGAAGATCCTGAAGCTTTGATCAGGGCTGATATGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGccc < 2:917127/150‑1 (MQ=255) tGCAACGTCGAGTTGACGCTGTTCACGCTGAAGATCCTGAAGCTTTGATCAGGGCTGATATGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCTGTCCGATGccc < 2:2034157/149‑1 (MQ=255) tGCAACGTCGAGTTGACGCTGTTCACGCTGAAGATCCTGAAGCTTTGATCAGGGCTGATATGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCTGTCCGATGccc > 1:2034157/1‑149 (MQ=255) aaCGTCGAGTTGACGCTGTTCACGCTGAAGATCCTGAAGCTTTGATCAGGGCTGATATGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAAc < 2:532562/150‑1 (MQ=255) gTCGAGTTGACGCTGTTCACGCTGAAGATCCTGAAGCTTTGATCAGGGCTGATATGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAAcctc < 1:2195244/150‑1 (MQ=255) tCGAGTTGACGCTGTTCACGCTGAAGATCCTGAAGCTTTGATCAGGGCTGATATGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAAcctca < 1:239244/150‑1 (MQ=255) cGAGTTGACGCTGTTCACGCTGAAGATCCTGAAGCTTTGATCAGGGCTGATATGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAAcctcag < 1:909960/150‑1 (MQ=255) gACGCTGTTCACGCTGAAGATCCTGAAGCTTTGATCAGGGCTGATATGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCTGTCCGATGccccctga > 1:1180094/1‑136 (MQ=255) gACGCTGTTCACGCTGAAGATCCTGAAGCTTTGATCAGGGCTGATATGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCTGTCCGATGccccctga < 2:1180094/140‑5 (MQ=255) aCGCTGTTCACGCTGAAGATCCTGAAGCTTTGATCAGGGCTGATATGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCATcctcagcctcagc > 1:491708/1‑150 (MQ=255) aCGCTGTTCACGCTGAAGATCCTGAAGCTTTGATCAGGGCTGATATGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAAcctcagcctcagc < 1:1847841/150‑1 (MQ=255) ttCACGCTGAAGATCCTGAAGCTTTGATCAGGGCTGATATGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACctcagcctcagcctcagc > 1:1358587/1‑150 (MQ=255) cTGAAGATCCTGAAGCTTTGATCAGGGCTGATATGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCaaa > 1:529779/1‑150 (MQ=255) cTGAAGATCCTGAAGCTTTGATCAGGGCTGATATGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCaaa > 1:529703/1‑150 (MQ=255) aaGATCCTGAAGCTTTGATCAGGGCTGATATGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCTGTCCGATGccccctga > 2:1524000/1‑120 (MQ=255) aaGATCCTGAAGCTTTGATCAGGGCTGATATGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCTGTCCGATGccccctga < 1:1524000/124‑5 (MQ=255) aTCCTGAAGCTTTGATCAGGGCTGATATGCTTGAGGAGTTTGCACAAGACTGCACGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCAAACCTAAGCCTAAGCCTCAGCGTCAAAAACTAg > 1:1060688/1‑150 (MQ=255) aTCCTGAAGCTTTGATCAGGGCTGATATGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAg < 1:56941/150‑1 (MQ=255) tGAAGCTTTGATCAGGGCTGATATGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTAt > 1:234803/1‑150 (MQ=255) tGAAGCTTTGATCAGGGCTGATATGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTAt > 1:1078598/1‑150 (MQ=255) cTTTGATCAGGGCTGATATGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCTGTCCGATGcccc < 1:1762940/108‑1 (MQ=255) cTTTGATCAGGGCTGATATGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCTGTCCGATGcccc > 2:1762940/1‑108 (MQ=255) gATCAGGGCTGATATGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAgcg > 1:247274/1‑150 (MQ=255) cTGATATGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAg < 1:637761/150‑1 (MQ=255) cTGATATGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGAGATCGATTAGATGCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAg < 2:1263360/150‑1 (MQ=255) tGATATGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAGc > 2:1397958/1‑150 (MQ=255) tatGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAg > 1:56899/1‑146 (MQ=255) tatGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAg > 1:56649/1‑146 (MQ=255) tatGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAg < 2:56899/146‑1 (MQ=255) tatGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAg < 2:56649/146‑1 (MQ=255) tGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAGCCACaa > 1:271384/1‑150 (MQ=255) tGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCCCACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAGCCACAAtctc < 2:572218/150‑1 (MQ=255) gaggagTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAGCCACAATCTCa < 2:966286/150‑1 (MQ=255) aggagTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAGCCACAATCTCAt < 2:234803/150‑1 (MQ=255) tttGAACAAGACTGTAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCTCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAGCCACAATCTCa < 1:428647/144‑1 (MQ=255) tttGAACAAGACTGCAAGTGACGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAGCCACAATCTCa > 2:428647/1‑144 (MQ=255) ttGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGACGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAGCCACAATCTCATGCAAcc < 1:156460/150‑1 (MQ=255) tGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAAcctcagcctcagcct < 2:1648801/94‑1 (MQ=255) tGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAAcctcagcctcagcct > 1:1648801/1‑94 (MQ=255) gAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAGCCACAATCTCATGCAACCGc < 2:1078598/150‑1 (MQ=255) aCAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAAcctcagcctcagc < 1:989592/89‑1 (MQ=255) aCAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAAcctcagcctcagc > 2:989592/1‑89 (MQ=255) cAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATgg < 1:223059/112‑1 (MQ=255) cAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATgg > 2:223059/1‑112 (MQ=255) aaGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGc > 1:1064230/1‑106 (MQ=255) aaGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGc < 2:1064230/106‑1 (MQ=255) gACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGAAAGATGGCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAGCCACAATCTCATGCAACCGCTGCCGt > 1:436996/1‑150 (MQ=255) aCTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAGCCACAATCTCATGCAACCGCTGCCGTa > 1:2067325/1‑150 (MQ=255) aCTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAGCCACAATCTCATGCAACCGCTGCCGTa < 2:1779561/150‑1 (MQ=255) tGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAg < 2:2348661/100‑1 (MQ=255) tGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAg > 1:2348661/1‑100 (MQ=255) tGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGaa < 1:1708098/120‑1 (MQ=255) tGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGaa > 2:1708098/1‑120 (MQ=255) tGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAGCCACAATCTCATGCAACCGCTGCCGTACg > 2:1582531/1‑150 (MQ=255) cAAGTGAAGTGGTAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAGCCACAATCTCATGCAACCGCTGCCGTACGAg < 2:537688/150‑1 (MQ=255) aagtgaagtgGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGCAGCCACAATCTCATGCAACCGCTGCCGTACGAGt > 1:763163/1‑150 (MQ=255) agtgaagtgGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAAcctcagcctcagcctca > 1:141819/1‑82 (MQ=255) agtgaagtgGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAAcctcagcctcagcctca < 2:141819/82‑1 (MQ=255) aagtgGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAGCCACAATCTCATGCAACCGCTGCCGTACGAGTCGGcg > 1:385986/1‑149 (MQ=255) aagggGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAGCCACAATCTCATGCAACCGCTGCCGTACGAGTCGGca < 2:1012973/150‑1 (MQ=255) tgGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAGCCACAATCTCATGCAACCGCTGCCGTACGAGTCGGCACAg > 1:1157500/1‑150 (MQ=255) tgGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAGCCACAATCTCATGCAACCGCTGCCGTACGAGTCGGCACAg > 1:861009/1‑150 (MQ=255) gCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAGCCACAATCTCATGCAACCGCTGCCGTACGAGTCGGCACAGTa > 2:2226327/1‑150 (MQ=255) aaaTGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTa > 2:1899804/1‑84 (MQ=255) aaaTGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTa < 1:1899804/84‑1 (MQ=255) aaTGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAGCCACAATCTCATGCAACCGCTGCCGTACGAGTCGGCACAGTATTg < 2:2148332/150‑1 (MQ=255) aaTGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAGCCACAATCTCATGCAACCGCTGCCGTACGAGTCGGCACAGTATTg < 2:529703/150‑1 (MQ=255) aaTGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAGCCACAATCTCATGCAACCGCTGCCGTACGAGTCGGCACAGTATTg < 2:529779/150‑1 (MQ=255) aTGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAGCCACAATCTCATGCAACCGCTGCCGTACGAGTCGGCACAGTATTGc > 2:824451/1‑150 (MQ=255) cTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAGCCACAATCTCATGCAACCGCTGCCGTACGAGTCGGCACAGTATTGCAtc > 1:737328/1‑150 (MQ=255) ccGTCGTGCATAGCGCGCTCAGGGGGCATCGGACACATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAGCCACAATCTCATGCAACCGCTGCCGTACGAGTCGGCACAGTATTGCATCTCTa < 2:1690124/150‑1 (MQ=255) tcgtGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGcc > 1:344010/1‑90 (MQ=255) tcgtGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGcc < 2:344010/90‑1 (MQ=255) tGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAGCCACAATCTCATGCAACCGCTGCCGTACGAGTCGGCACAGTATTGCATCTCTAGCTCCg > 1:213909/1‑150 (MQ=255) cgcTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAGCCACAATCTCATGCAACCGCTGc < 2:545532/105‑1 (MQ=255) cgcTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAGCCACAATCTCATGCAACCGCTGc > 1:545532/1‑105 (MQ=255) gcTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAGCCACAATCTCATGCAACCGCTGCCGTACGAGTCGGCACAGTATTGCATCTCTAGCTCCGAGCATGCCCt > 1:1324662/1‑150 (MQ=255) ttggggCATCTGTCCGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCTCGCCGAAGCCACAATCTCATGCAACCGCTGCCGTACGAGTCAGTATACTATTTCATCTCTAGCTCCGAGCATGCCCTGACa > 2:1379203/3‑150 (MQ=255) gCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGCGCGCGCCGAAGCCACAATCTCATGCAACCGCTGCCGTACGCGTCGGCACAGTATTGCATCTCTAGCTCAGAGCATGCCCTGACCCTTcc > 2:509347/1‑150 (MQ=255) aTCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAGCCACAATCTCATGCAACCGCTGCCGTACGAGTCGGCACAGTATTGCATCTCTAGCTCCGAGCATGCCCTGACATTTCcgc < 1:1397958/150‑1 (MQ=255) | TTGCGTGCAACGTCGAGTTGACGCTGTTCACGCTGAAGATCCTGAAGCTTTGATCAGGGCTGATATGCTTGAGGAGTTTGAACAAGACTGCAAGTGAAGTGGCAAATGCTGACCGTCGTGCATAGCGCGCTCAGGGGGCATCGGACAGATGCCCCAACCTCAGCCTCAGCCTCAGCCTCAAAACCTAGCTATGGCCGAGCGCGCCGAAGCCACAATCTCATGCAACCGCTGCCGTACGAGTCGGCACAGTATTGCATCTCTAGCTCCGAGCATGCCCTGACATTTCCGC > NC_002947/4221089‑4221377 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |