| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,301,115 | C→T | 5.1% | A79V (GCC→GTC) | PP_3774 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,301,115 | 0 | C | T | 5.1% | 291.3 / 2.9 | 98 | A79V (GCC→GTC) | PP_3774 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (48/45); new base T (2/3); total (50/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.76e-01 | |||||||||||
Only 100 of 102 total aligned reads displayed.
GAAGCGATTGCCCGCTTTCCCAGCATCGTGACGGTGCTCAGCGATGGCTCGATCCAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCGGGGACGACGGCCCGCCGGTAAAGGTGTTCTGGAACAAGGGCAACATCACCCTGGGGTTTCGGC > NC_002947/4300967‑4301264 | taaGCGATTGCCCGCTTTCCCAGCATCGTGACGGTGCTCAGCGATGGCTCGATCCAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGTCCAGCGcc > 1:344388/2‑150 (MQ=255) aaGCGATTGCCCGCTTTCCCAGCATCGTGACGGTGCTCAGCGATGGCTCGATCCAGTTCTTAGCCCCAACCTAAGGGCCTTCCCGCAAACGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGccc < 2:1623600/150‑1 (MQ=255) aaGCGATTGCCCGCTTTCCCAGCATCGTGACGGTGCTCAGCGATGGCTCGATCCAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGccc < 2:2308627/150‑1 (MQ=255) aGCGATTGCCCGCTTTCCCAGCATCGTGACGGTGCTCAGCGATGGCTCGATCCAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGGCGCTGGCCAGCGTCCa < 1:423561/150‑1 (MQ=255) aGCGATTGCCCGCTTTCCCAGCATCGTGACGGTGCTCAGCGATGGCTCGATCCAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGGCGCTGGCCAGCGTCCa < 1:2162906/150‑1 (MQ=255) gCGATTGCCCGCTTTCCCAGCATCGTGACGGTGCTCAGCGATGGCTCGATCCAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAg < 2:1788796/150‑1 (MQ=255) ttGCCCGCTTTCCCAGCATCGTGACGGTGCTCAGCGATGGCTCGATCCAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATc > 1:2269129/1‑150 (MQ=255) cccGCTTTCCCAGCATCGTGACGGTGCTCAGCGATGGCTCGATCCAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGCATCACt < 2:344388/150‑1 (MQ=255) ccGCTTTCCCAGCATCGTGACGGTGCTCAGCGATGGCTCGATCCAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTg > 1:2346990/1‑150 (MQ=255) ccGCTTTCCCAGCATCGTGACGGTGCTCAGCGATGGCTCGATCCAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTg < 2:1539065/150‑1 (MQ=255) cGCTTTCCCAGCATCGTGACGGTGCTCAGCGATGGCTCGATCCAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGGCTGGACGCTGGCCAGCGCCCAGGATCACTgg > 2:2170633/1‑150 (MQ=255) gCTTTCCCAGCATCGTGACGGTGCTCAGCGATGGCTCGATCCAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACt < 1:840467/147‑1 (MQ=255) gCTTTCCCAGCATCGTGACGGTGCTCAGCGATGGCTCGATCCAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACt > 2:840467/1‑147 (MQ=255) cTTTCCCAGCATCGTGACGGTGCTCAGCGATGGCTCGATCCAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGaa > 1:1606592/1‑150 (MQ=255) ttCCCAGCATCGTGACGGTGCTCAGCGATGGCTCGATCCAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATc < 1:1353895/150‑1 (MQ=255) cccAGCATCGTGACGGTGCTCAGCGATGGCTCGATCCAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGc > 1:900580/1‑150 (MQ=255) cccAGCATCGTGACGGTGCTCAGCGATGGCTCGATCCAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGc < 2:1006457/150‑1 (MQ=255) cccAGCATCGTGACGGTGCTCAGCGATGGCTCGATCCAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCCCCCAGGATCACTGGAATCGc > 2:180618/1‑150 (MQ=255) ccAGCATCGTGACGGTGCTCAGCGATGGCTCGATCCAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGcc > 2:2229385/1‑150 (MQ=255) aGCATCGTGACGGTGCTCAGCGATGGCTCGATCCAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAg > 1:1893529/1‑150 (MQ=255) aGCATCGTGACGGTGCTCAGCGATGGCTCGATCCAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAg > 1:1607070/1‑150 (MQ=255) tGACGGTGCTCAGCGATGGCTCGATCCAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGa < 1:2239908/150‑1 (MQ=255) gCGATGGCTCGATCCAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAgg < 2:2345786/150‑1 (MQ=255) cGATGGCTCCATCCAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGt < 1:326470/150‑1 (MQ=255) aTGGCTCGATCCAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCa > 1:2369973/1‑150 (MQ=255) cTCGATCCAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAgg < 2:914290/143‑1 (MQ=255) cTCGATCCAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAgg > 1:914290/1‑143 (MQ=255) cTCGATCCAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTc < 2:262344/150‑1 (MQ=255) tCGATCCAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCACAAGCACCCACATGACACGCTGCGAATGGGGGGAAACAGCTCTTCAATACGCCCG‑CAACGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCg > 1:2388336/1‑150 (MQ=255) tCGATCCAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCg > 2:606720/1‑150 (MQ=255) tCGATCCAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCg > 1:2087056/1‑150 (MQ=255) tCGATCCAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCg > 2:2083515/1‑150 (MQ=255) tCCAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGGCTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGgcgc < 1:2170633/150‑1 (MQ=255) cAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACATGCTGCGAATGGGCGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACGCGGCGCAg > 1:958809/1‑150 (MQ=255) aGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGa > 1:1780222/1‑150 (MQ=255) gTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGaa < 2:1606592/150‑1 (MQ=255) tcAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAggtg < 2:1893529/150‑1 (MQ=255) tcAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAggtg < 1:606720/150‑1 (MQ=255) ccAGCCCCAACCAAAGGGTCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAggtg < 2:850281/149‑1 (MQ=255) cccAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCaa > 1:360457/1‑129 (MQ=255) cccAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCaa < 2:360457/129‑1 (MQ=255) ccaaccaaAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACt > 2:1609372/1‑94 (MQ=255) ccaaccaaAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACt < 1:1609372/94‑1 (MQ=255) ccaaccaaAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATc > 1:207239/1‑150 (MQ=255) aaccaaAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACt < 1:900778/92‑1 (MQ=255) aaccaaAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACt > 2:900778/1‑92 (MQ=255) aaccaaAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGc < 2:2350218/150‑1 (MQ=255) caaAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCa < 2:1724784/150‑1 (MQ=255) caaAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCa < 2:1780222/150‑1 (MQ=255) aaaGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑TCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAg > 2:334682/1‑150 (MQ=255) aaGGGGCTTAGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCGAGGATCACTGGAATCGCCAGACAATGACGGTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGa < 1:1564974/150‑1 (MQ=255) gCTGCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCAc < 1:1078016/150‑1 (MQ=255) ttCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGt > 2:2077632/1‑150 (MQ=255) cAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCgg < 2:2269129/150‑1 (MQ=255) aaGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCGGGga < 2:2388336/150‑1 (MQ=255) ccACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGAt > 2:792775/1‑61 (MQ=255) ccACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGAt < 1:792775/61‑1 (MQ=255) ccACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCGGGGACGACgg > 1:1087301/1‑150 (MQ=255) ccACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCGGGGACGACgg < 1:334682/150‑1 (MQ=255) acaGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCGGGGACGACGGcc > 1:795387/1‑150 (MQ=255) acacGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCGGGGACGACGGCccgccg > 2:525289/1‑150 (MQ=255) acGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCAAGAACCACTGAAATCGCCACACAATGACGCCGAGAATGCTCGACTTGTCGCAGAAGGGGTTGATCGCCCAGATGCACGTACGCGGGGACGACGGCCCGCCGGt > 2:864956/1‑150 (MQ=255) gCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCGGGGACGACGGCCCGCCGGTaa > 1:503606/1‑150 (MQ=255) tGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCGGGGACGACGGCCCGCCGGTAAAg < 2:503606/150‑1 (MQ=255) tGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCGGGGACGACGGCCCGCCGGTAAAg > 2:2053630/1‑150 (MQ=255) gAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGAAGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCGGGGACGACGGCCCGCCGGTAAAGgtg > 1:1102831/1‑150 (MQ=255) ggACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCGGGGACGACGGCCCGCCGGTAAAGGTGTTCt < 1:1627884/150‑1 (MQ=255) gACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCGGGGACGACGGCCCGCCGGTAAAGGTGTTCTg < 2:1607070/150‑1 (MQ=255) gACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTACACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCGGGGACGACGGCCCGCCGGTAAAGGTGTTCTg > 1:156336/1‑150 (MQ=255) ggAAAC‑GCAAGACTGGACGCTGGCCCGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCGGGGACGACGGCCCGCCGGTAAAGGTGTTCTGGaa < 2:2280133/150‑1 (MQ=255) ggAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCGGGGACGACGGCCCGCCGGTaaa > 2:209585/1‑138 (MQ=255) ggAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCGGGGACGACGGCCCGCCGGTaaa < 1:209585/138‑1 (MQ=255) gAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTAcgc > 1:1815337/1‑114 (MQ=255) gAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTAcgc < 2:1815337/114‑1 (MQ=255) aC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCGGGGACGACGGCCCGCCGGTAAAGGTGTTCTGGAACAAg < 1:2229385/150‑1 (MQ=255) aC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCGGGGACGACGGCCCGCCGGTAAAGGTGTTCTGGAACAAg < 2:795387/150‑1 (MQ=255) c‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCGGGGACGACGGCCCGCCGGTAAAGGTGTTCTGGAACAAgg < 2:104933/150‑1 (MQ=255) gCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAggtggt < 2:87547/87‑1 (MQ=255) gCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAggtggt > 1:87547/1‑87 (MQ=255) gCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCGGGGACGACGGCCCGCCGGTAAAGGTGTTCTGGAACAAggg > 2:1615825/1‑150 (MQ=255) aaGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCg > 1:1721386/1‑90 (MQ=255) aaGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCg < 2:1721386/90‑1 (MQ=255) aaGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCGGGGACGACGGCCCGCCGGTAAAGGTGTTCTGGAACAAGGGCa > 2:1522268/1‑150 (MQ=255) tGGGCGCTGGCCAGCGTCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAgg > 1:1157579/1‑76 (MQ=255) tGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCGGGGACGACGGCCCGCCGGTAAAGGTGTTCTGGAACAAGGTCAACATc < 1:1522268/150‑1 (MQ=255) tGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCGGGGACGACGGCCCGCCGGTAAAGGTGTTCTGGAACAAGGGCAACATc > 2:413758/1‑150 (MQ=255) tGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCGGGGACGACGGCCCGCCGGTAAAGGTGTTCTGGAACAAGGGCAACATc > 2:567517/1‑150 (MQ=255) ggcGCTGGCCAGCGTCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCGGGGACGACGGCCCGCCGGTAAAGGTGTTCTGGAACAAGGGCAACATCAc > 2:569379/3‑150 (MQ=255) gACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAg > 2:1789898/1‑55 (MQ=255) gACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAg < 1:1789898/55‑1 (MQ=255) gCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCGGGGACGACGGCCCGCCGGTAAAGGTGTTCTGGAACAAGGGCAACATCACCCt > 1:1319950/1‑150 (MQ=255) tGGCCAGCGTCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCGGGGACGACGGCCCGCCGGTAAAGGTGTTCTGGAACAAGGGCAACATCACCCTgg < 1:569379/150‑1 (MQ=255) tGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAggtggt > 1:1954330/1‑73 (MQ=255) tGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAggtggt < 2:1954330/73‑1 (MQ=255) tGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCGGGGACGACGGCCCGCCGGTAAAGGTGTTCTGGAACAAGGGCAACATCACCCTgg > 2:1800819/1‑150 (MQ=255) tGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCGGGGACGACGGCCCGCCGGTAAAGGTGTTCTGGAACAAGGGCAACATCACCCTgg > 2:31460/1‑150 (MQ=255) ggCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCGGGGACGACGGCCCGCCGGTAAAGGTGTTCTGGAACAAGGGCAACATCACCCTggg < 2:2087056/150‑1 (MQ=255) gCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCGGGGACGACGGCCCGCCGGTAAAGGTGTTCTGGAACAAGGGCAACATCACCCTgggg > 1:1000317/1‑150 (MQ=255) ccAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCGGGGACGACGGCCCGCCGGTAAAGGTGTTCTGGAACAAGGGCAACATCACCCTGGGGt > 2:1963951/1‑150 (MQ=255) cccAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCGGGGACGACGGCCCGCCGGTAAAGGTGTTCTGGAACAAGGGCAACATCACCCTGGGGTTTCGgc < 2:1000317/150‑1 (MQ=255) | GAAGCGATTGCCCGCTTTCCCAGCATCGTGACGGTGCTCAGCGATGGCTCGATCCAGTTCTCAGCCCCAACCAAAGGGGCTTCGAGCAAAAGCACCCACAGGACACGCTGCGAATGGACGGAAAC‑GCAAGACTGGACGCTGGCCAGCGCCCAGGATCACTGGAATCGCCAGACAATGACGCTGACCAAGGTCAACTCGGCGCAGAAGGTGGTCATCGCCCAGATGCACGTACGCGGGGACGACGGCCCGCCGGTAAAGGTGTTCTGGAACAAGGGCAACATCACCCTGGGGTTTCGGC > NC_002947/4300967‑4301264 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |