| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,479,869 | C→T | 5.8% | P392P (CCC→CCT) | ybdR → | Zn‑dependent oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,479,869 | 0 | C | T | 5.8% | 363.6 / 7.4 | 122 | P392P (CCC→CCT) | ybdR | Zn‑dependent oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base C (62/51); new base T (5/2); total (68/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
Only 100 of 127 total aligned reads displayed.
CTGCTGGAGCACATCGAAGCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGCGACAAGACCGATGCCGTG > NC_002947/4479720‑4480017 | tgGAGCACATCGAAGCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCa > 1:246740/1‑150 (MQ=255) gAGNACATCGAAGCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCAcc > 2:1505397/1‑150 (MQ=255) gCACATCGAAGCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCtt > 1:2001562/1‑150 (MQ=255) aTCGAAGCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCGGGTGCAGCACCTGGcg > 1:403663/1‑141 (MQ=255) aTCGAAGCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCGGGTGCAGCACCTGGCa < 2:403663/142‑1 (MQ=255) gCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGGGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGac > 2:1285852/1‑150 (MQ=255) gCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCTGCAAGGTCATCCTCGTGCGAGGTGCTGCACCCGGCACCTTGGGCCCTGac > 2:1248159/1‑150 (MQ=255) gCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGac < 2:897317/150‑1 (MQ=255) gCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGac > 1:684521/1‑150 (MQ=255) gCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGac > 2:470402/1‑150 (MQ=255) gcCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACctct > 1:650314/1‑150 (MQ=255) tGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCg > 2:1736259/1‑123 (MQ=255) tGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTaga < 1:1867108/150‑1 (MQ=255) gCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTagag < 2:253430/150‑1 (MQ=255) cGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGATACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAggagga > 1:60523/1‑150 (MQ=255) gAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAAt < 2:603542/150‑1 (MQ=255) aaCTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGccc < 2:342516/127‑1 (MQ=255) aaCTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGccc > 1:342516/1‑127 (MQ=255) aaCTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATg > 2:67513/1‑150 (MQ=255) tGATCGTTACTCACCACTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATc > 2:580957/1‑150 (MQ=255) aTCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTg > 2:1759255/1‑117 (MQ=255) aTCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTg < 1:1759255/117‑1 (MQ=255) aCTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGTCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACgg > 2:1100383/1‑150 (MQ=255) tCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGtc < 2:106784/150‑1 (MQ=255) tCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGtc > 1:1367194/1‑150 (MQ=255) aCCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGc > 1:1820483/1‑101 (MQ=255) aCCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGc < 2:1820483/101‑1 (MQ=255) ttAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAg < 2:246740/150‑1 (MQ=255) ccTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGt > 1:1603047/1‑137 (MQ=255) ccTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGt < 2:1603047/137‑1 (MQ=255) ccTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACt > 1:759638/1‑150 (MQ=255) cTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGt < 2:680748/136‑1 (MQ=255) cTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACtt > 2:712562/1‑150 (MQ=255) cTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACtt > 2:1768665/1‑150 (MQ=255) cTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACAATAGCACACGTCTGAACTCAAG‑TGATGTATGAGCATGAACGGTCTCGCCAGTTACtt > 1:2377739/1‑150 (MQ=255) tAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACct > 2:818353/1‑109 (MQ=255) cggcCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGcc < 1:470402/150‑1 (MQ=255) ccATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTa < 2:2001562/150‑1 (MQ=255) tGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGTCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCg < 1:1100383/150‑1 (MQ=255) tGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGTC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCg < 2:2292986/150‑1 (MQ=255) gCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCt < 1:1034104/83‑1 (MQ=255) gCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCt > 2:1034104/1‑83 (MQ=255) tACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGATGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAAt > 2:1186488/1‑150 (MQ=255) aaTGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAAttcttc < 1:1505397/150‑1 (MQ=255) gTTCGCTCAAAAGTATTATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGc < 2:60523/150‑1 (MQ=255) ttCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCt > 2:1334178/1‑150 (MQ=255) gATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCAt > 1:469638/1‑150 (MQ=255) aTCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTCGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATc > 2:1186122/1‑150 (MQ=255) aTCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACTGTCTCGCCAGTTACTTCTGTATTGCCGTAGCGGCAATTCTTCTGCTCATc < 2:684521/150‑1 (MQ=255) aTCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATc > 1:660382/1‑150 (MQ=255) aaaaGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGcc < 2:1892252/123‑1 (MQ=255) aaaaGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGcc > 1:1892252/1‑123 (MQ=255) aaaaGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGAc > 1:1737307/1‑150 (MQ=255) aaGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGa > 2:941267/1‑116 (MQ=255) aaGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGa < 1:941267/116‑1 (MQ=255) aaGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCt < 1:712562/150‑1 (MQ=255) cAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCAGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTa < 2:2223307/105‑1 (MQ=255) cAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCAGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTa > 1:2223307/1‑105 (MQ=255) aGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTgg < 2:650314/150‑1 (MQ=255) aGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTgg < 2:469638/150‑1 (MQ=255) gATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGc > 2:1457330/1‑150 (MQ=255) tGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGac < 1:1922335/54‑1 (MQ=255) tGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGac > 2:1922335/1‑54 (MQ=255) tGCCGCAAGGTCATACTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGt > 2:2033217/1‑150 (MQ=255) ccGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCa < 2:1367194/150‑1 (MQ=255) ccGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCATGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCa > 1:238889/1‑150 (MQ=255) gCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGc < 1:2136413/150‑1 (MQ=255) aaGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCgt > 1:878130/1‑150 (MQ=255) gTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGcc < 2:1226365/100‑1 (MQ=255) gTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGcc > 1:1226365/1‑100 (MQ=255) tCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTc < 2:1570886/150‑1 (MQ=255) aTCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCg > 1:1801139/1‑150 (MQ=255) aTCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCg > 2:1386427/1‑150 (MQ=255) caaggTGCCGGGTGCAGCACCTGGCACCTTGGGCCCTGAC‑CACCTCTAGCGGAGGCATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTCTGGGCCATCGTCAGCGTGTTCCGGa > 2:785574/5‑150 (MQ=255) caaggTGCCGGGTGCAGCACCTGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGa > 2:941183/5‑150 (MQ=255) cTCGTGCCAGGTGTTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAg > 1:1236467/1‑150 (MQ=255) cTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCAt < 1:536217/117‑1 (MQ=255) cTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTc > 1:410087/1‑136 (MQ=255) cTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTc < 2:410087/136‑1 (MQ=255) tCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGAc < 1:1181576/120‑1 (MQ=255) tCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTgg < 1:870381/126‑1 (MQ=255) tCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGc < 1:1334178/150‑1 (MQ=255) tCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGc < 1:1248159/150‑1 (MQ=255) gTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGc < 1:387139/148‑1 (MQ=255) gTGCCAGGTGCTGCACCCGACACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGCGa > 1:1554891/1‑150 (MQ=255) tGCCGGGTGCAGCACCTGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGCGAc > 1:2120260/1‑150 (MQ=255) ccAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAAAGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAg > 2:720509/1‑144 (MQ=255) ccAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAAAGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAg < 1:720509/144‑1 (MQ=255) cAGGTGCTGCACCCGGCACCTTGTGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCTTGTTCCGGAGCGACAAg > 2:1184846/1‑150 (MQ=255) aGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGCGACAAGa < 1:1186122/150‑1 (MQ=255) ggTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGCGACAAGAc > 1:947825/1‑150 (MQ=255) ggTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGCGACAAGAc > 1:1457471/1‑150 (MQ=255) ggTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGCGACAAGAc > 1:1692156/1‑150 (MQ=255) ggTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACAGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGCGACAAGAc > 2:1237390/1‑150 (MQ=255) gTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGCGACAAGAcc > 2:329702/1‑150 (MQ=255) cACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGCGACAAGACCGATGcc > 1:2452386/1‑150 (MQ=255) aCCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAAttcttc < 2:1363114/93‑1 (MQ=255) ccGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCt < 2:2287087/104‑1 (MQ=255) ccGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGCGACAAGACCGATGCCGTg > 1:1678845/1‑150 (MQ=255) ccGGCACCTTGGGCCCTGAC‑CACCTATCGCTGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGCGACAAGACCGATGCCGTg > 1:663754/1‑150 (MQ=255) | CTGCTGGAGCACATCGAAGCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGAC‑CACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGCGACAAGACCGATGCCGTG > NC_002947/4479720‑4480017 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |