| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,530,070 | T→A | 10.0% | intergenic (+32/‑136) | PP_4018 → / → topB | acetyltransferase/DNA topoisomerase III |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,530,070 | 0 | T | A | 10.0% | 249.3 / 14.1 | 91 | intergenic (+32/‑136) | PP_4018/topB | acetyltransferase/DNA topoisomerase III |
| Reads supporting (aligned to +/- strand): ref base T (39/42); new base A (4/5); total (44/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.40e-01 | |||||||||||
CGCCCAGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGCGTCCCCGGCCATGCGCCTGTTTCT > NC_002947/4529924‑4530219 | cgcCCAGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTAcc < 2:346091/150‑1 (MQ=255)cgcCCAGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTAcc < 2:1747822/150‑1 (MQ=255) ggTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGa‑a < 1:1953515/150‑1 (MQ=255) ggTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGa‑a < 1:314666/150‑1 (MQ=255) ggTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGa‑a < 1:1210888/150‑1 (MQ=255) gTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTAccc < 2:1961180/144‑1 (MQ=255) gTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTAccc > 1:1961180/1‑144 (MQ=255) gTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑ag > 2:1549587/1‑150 (MQ=255) tGCACTCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTAAACCCGCGA‑aga < 1:740947/150‑1 (MQ=255) tGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTAAACCCGCGA‑aga < 2:2076153/150‑1 (MQ=255) tGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCACCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTAAACCCGCGA‑aga < 2:152435/150‑1 (MQ=255) acgccacgccGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑GGAGGc < 2:2197548/150‑1 (MQ=255) gccacgccGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCGCCTGAGCCGGCCTCTTCGCGGGTAAACCCGCGa‑a < 2:265404/143‑1 (MQ=38) gccacgccGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCGCCTGAGCCGGCCTCTTCGCGGGTAAACCCGCGa‑a > 1:265404/1‑143 (MQ=38) ccacgccGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCgg > 1:1501615/1‑150 (MQ=255) cacgccGTTCTATGAGCGGCTGGGCTTTCGCGTAGGCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGc > 1:1377921/1‑150 (MQ=255) cGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGGCATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAgg > 2:1229104/1‑150 (MQ=255) gTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGTCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGc < 2:1300372/150‑1 (MQ=255) gTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGc < 2:542188/150‑1 (MQ=255) ttCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCg > 1:2347440/1‑150 (MQ=255) tCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGa < 2:2112584/150‑1 (MQ=255) cTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGat < 2:1130958/150‑1 (MQ=255) gCGGCTGGGCTTTCGCGTAGTCAGCGAGGCATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCCCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACAt < 1:547316/150‑1 (MQ=255) gCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCCACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACAt < 1:90849/150‑1 (MQ=255) gCTGGGCTTTCGCGTAGTCAGCGCGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATccc > 2:1188993/1‑150 (MQ=255) cTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATcccc > 2:304603/1‑150 (MQ=255) cTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATcccc > 1:1090975/1‑150 (MQ=255) tGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑ag < 1:2308407/122‑1 (MQ=255) tGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑ag > 2:2308407/1‑122 (MQ=255) gggCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACAGCCCCGc < 2:120204/150‑1 (MQ=255) cgTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGGTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACaaaaa > 2:754598/1‑150 (MQ=255) gTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACaaaaaa > 2:2324567/1‑150 (MQ=255) tAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAAc > 2:802184/1‑150 (MQ=255) tAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAAc < 1:1329840/150‑1 (MQ=255) gTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCt < 2:2347440/150‑1 (MQ=255) cttcGAGGAATTCCTCGAAGGTGGCATCCCGCATGTCGACATGGTACGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGAACGTGTACCCGCGA‑AGAGACCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGt > 1:1208922/4‑150 (MQ=255) cGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGCTCCGCTGGAA‑CCTAACTGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTAca > 2:62788/1‑150 (MQ=255) gAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGAGTAAACCcgc > 2:2355962/1‑98 (MQ=39) aGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATcc < 1:1375540/126‑1 (MQ=255) aGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCt < 2:2207900/143‑1 (MQ=255) aGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCt > 1:2207900/1‑143 (MQ=255) aGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCCGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATcc > 2:1375540/1‑126 (MQ=255) tCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACAtccatcca < 1:1909783/150‑1 (MQ=255) ccTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATNCAg < 2:1501615/150‑1 (MQ=255) cTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGa > 2:881126/1‑125 (MQ=255) cTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGa < 1:881126/125‑1 (MQ=255) cTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGa > 1:853579/1‑150 (MQ=255) tCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGAt > 1:966920/1‑150 (MQ=255) tCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGAt < 1:1549587/150‑1 (MQ=255) gAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑agag > 2:1285587/1‑92 (MQ=255) gAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑agag < 1:1285587/92‑1 (MQ=255) tGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACtt < 1:802184/150‑1 (MQ=255) gCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGc < 1:2324567/150‑1 (MQ=255) gCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGc < 1:1188993/150‑1 (MQ=255) gACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGc > 1:1259017/1‑150 (MQ=255) gACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCCTTACCTCCATCCCGATAAAACTTGCCTCTGCGccccccc > 1:401494/1‑148 (MQ=255) tGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTgc < 1:462004/150‑1 (MQ=255) tGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTgc < 2:1259017/150‑1 (MQ=255) gACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTa > 2:1836626/1‑150 (MQ=255) aCTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTAt < 1:1229104/150‑1 (MQ=255) cgcgcgCCTGATCCGTCACCTGCACTGGCCTCTTCGCGGGTTT‑CCCCCGATATAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGc < 1:744431/150‑1 (MQ=255) gcgcCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCt < 2:1238354/92‑1 (MQ=255) gcgcCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCt > 1:1238354/1‑92 (MQ=255) gcgcCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCcca > 1:553165/1‑150 (MQ=255) gcCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGcc < 1:1810118/146‑1 (MQ=255) gcCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGcc > 2:1810118/1‑146 (MQ=255) gcCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCccacc > 2:110511/1‑150 (MQ=255) gcCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGACGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCccacc > 2:116821/1‑150 (MQ=255) gatcttCCATCACCTGCACTGGCCTCTTCGCGGGTTTACACGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCccacca < 1:391137/145‑1 (MQ=255) gATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCAccc > 1:2287390/1‑150 (MQ=255) aTCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCAcccc > 1:1456082/1‑150 (MQ=255) ccATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCACCACGCCCCCTCTGCCGCATCCTATGGCCCacccccgatc > 2:391137/1‑146 (MQ=255) cATCACCTGCACTGGCCTCTTTGCCGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATTCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGAt < 2:1208922/150‑1 (MQ=255) aTCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTAcatccatc < 1:1596262/92‑1 (MQ=255) aTCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTAcatccatc > 2:1596262/1‑92 (MQ=255) cACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGaa < 1:430907/150‑1 (MQ=255) ccTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGc < 2:1456082/150‑1 (MQ=255) cTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGCg > 1:633246/1‑150 (MQ=255) gCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATGCTATGGCCCACCACCCCGATGAAGCGTc < 1:62788/150‑1 (MQ=255) cACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAACACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCCCCCCGATGAAGCGTcc > 2:46680/1‑150 (MQ=255) tGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGCGTCCCCg > 1:431895/1‑150 (MQ=255) tGGCCTCTTCGCGGGTTTACCCGCGA‑AAAGGCCGCCTC‑TGCAATCGTTTCTTTCCGCTTACAAAAAACCGGGACTTCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGCGTCCCCg > 1:1004226/1‑150 (MQ=255) gCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTg > 2:480022/1‑98 (MQ=255) gCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTg < 1:480022/98‑1 (MQ=255) ccTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCTAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCccacca < 1:1632959/128‑1 (MQ=255) ccTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCTAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCccacca > 2:1632959/1‑128 (MQ=255) ctctTCGCGGGTAAACCCGCGA‑AGAGGCCAGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGCGTCCCCGGCCa > 1:438072/1‑150 (MQ=255) ttCGCGGGTAAACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGCGTCCCCGGCCATgc > 1:1753990/1‑150 (MQ=255) cgGGTAAACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGCGTCCCCGGCCATGCGCCt < 2:1753990/150‑1 (MQ=255) gggTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGCGTCCCCGGCCATGCGCCTg < 2:853579/150‑1 (MQ=255) ggTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGCGTCCCCGGCCATGCGCCTGt > 1:471427/1‑150 (MQ=255) ttACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGcc < 2:2025717/110‑1 (MQ=255) ttACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGcc > 1:2025717/1‑110 (MQ=255) tACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGCGTCCCCGGCCATGCGCCTGTTtct > 2:1827184/1‑150 (MQ=255) | CGCCCAGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCCGCGA‑AGAGGCCGGCTCAGGCGAT‑ATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGCGTCCCCGGCCATGCGCCTGTTTCT > NC_002947/4529924‑4530219 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |