| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,579,942 | G→C | 5.2% | S71R (AGC→AGG) | glgB ← | 1,4‑alpha‑glucan branching enzyme |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,579,942 | 0 | G | C | 5.2% | 303.3 / 6.8 | 97 | S71R (AGC→AGG) | glgB | 1,4‑alpha‑glucan branching enzyme |
| Reads supporting (aligned to +/- strand): ref base G (49/42); new base C (2/3); total (51/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.63e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.75e-01 | |||||||||||
TGCCTTCCGCGAACAAGTGAAGGTCCATGTCTCCCAATTGCGGGCCGAAGCTGTAGGGGTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGAAAGGCGCGGACCACCTGCCCGCCTGCGCCGTCGCCGTGGGGGCCGAGTACCGCAAAAGGATCGGCGTGTTCG > NC_002947/4579794‑4580089 | tGCCTTCCGCGAACAAGTGAAGGTCCATGTCTCCCAATTGCGGGCCGAAGCTGTAGGGGTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGc > 1:601883/1‑150 (MQ=255) gcgAACAAGTGAAGGTCCATGTCTCCCAATTGCGGGCCGAAGCTGTAGGGGTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGc < 1:2212917/150‑1 (MQ=255) gcgAACAAGTGAAGGTCCATGTCTCCCAATTGCGGGCCGAAGCTGTAGGGGTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGc < 2:1943246/150‑1 (MQ=255) gcgAACAAGAGTAGGTCCATGTCTCCCAATTGCGGGCCGAAGCTGTAGGGGTCTTCGGTACGTAGCTCACGACCGGCCATAACGATGTGAAGCTGCTAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGc < 1:1355597/150‑1 (MQ=255) cgAACAAGTGAAGGTCCATGTCTCCCAATTGCGGGCCGAAGCTGTAGGGGTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGCCTGcccgggt < 2:212107/150‑5 (MQ=255) aaCAAGTGAAGGTCCATGTCTCCCACTTGCGGGCCGAAGCTGTAGGGGTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTcc < 2:555975/150‑1 (MQ=255) aaGTGAAGGTCCATGTCTCCCAATTGCGGGCCGAAGCTGTAGGGGTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCAtt > 2:721753/1‑150 (MQ=255) gTGAAGGTCCATGTCTCCCAATTGCGGGCCGAAGCTGTAGGGGTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTc > 1:2319766/1‑150 (MQ=255) gTGAAGGTCCATGTCTCCCAATTGCGGGCCGAAGCTGTAGGGGTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTc < 2:1865730/150‑1 (MQ=255) ggTCCATGTCTCCCAATTGCGGGCCGAAGCTGTAGGGGTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCaa < 1:1721761/150‑1 (MQ=255) gTCCATGTCTCCCAATTGCGGGCCGAAGCTGTAGGGGTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAg > 1:1169774/1‑150 (MQ=255) tCCATGTCTCCCAATTGCGGGCCGAAGCTGTAGGGGTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGc > 2:807973/1‑150 (MQ=255) gTCTCCCAATTGCGGGCCGAAGCTGTAGGGGTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGGATCTGATAGGGCCGTCCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCAcccg > 1:166712/1‑150 (MQ=255) tcCCAATTGCGGGCCGAAGCTGTAGGGGTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTg > 1:1233051/1‑121 (MQ=255) tcCCAATTGCGGGCCGAAGCTGTAGGGGTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCAcccgccc > 1:1278288/1‑150 (MQ=255) tcCCAATTGCGGGCCGAAGCTGTAGGGGTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCCGGCAGGCTGCCCTGCTCCATTTCGGCAAGCAcccgccc > 1:2060150/1‑150 (MQ=255) tcCCAATTGCGGGCCGAAGCTGTAGGGGTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGACAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTg < 2:1233051/121‑1 (MQ=255) aaTTGCGGGCCGAAGCTGTAGGGGTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCa > 1:1783785/1‑150 (MQ=255) aaTTGCGGGCCGAAGCTGTAGGGGTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCa > 1:1783775/1‑150 (MQ=255) aaTTGCGGGCCGAAGCTGTAGGGGTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGGGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCa > 1:616770/1‑150 (MQ=255) ggCCGAAGCGGTAGGGGTCTTCGGTAACTTGCTCGCCACCGGCCCTGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGTCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCggg < 2:321251/150‑1 (MQ=255) gCCGAAGCTGTAGGGGTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGNAGGCTGNCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATGCCGNGc < 1:2184680/150‑1 (MQ=255) gCCGAAGCTGTAGGGGTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGc > 2:1413212/1‑150 (MQ=255) gCCGAAGCTGTAGCGGTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCCGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGc < 2:1295824/150‑1 (MQ=255) aGCTGTAGGGGTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGaa < 1:1754984/150‑1 (MQ=255) tGTAGGGGTCTTCGGTAACTTGCTCGCCACCGGGCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATgc > 2:79144/1‑150 (MQ=255) gTAGGGGTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATgcg < 2:1250687/150‑1 (MQ=255) gTAGGGGTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTACATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATgcg > 1:1690398/1‑150 (MQ=255) tAGGGGTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATgcgc < 2:1278288/150‑1 (MQ=255) tAGGGGTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATgcgc > 2:288253/1‑150 (MQ=255) gggTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACt < 2:2303042/150‑1 (MQ=255) gggTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACt < 1:1196815/150‑1 (MQ=255) gggTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACt > 1:434445/1‑150 (MQ=255) gggTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGCCTGcccggg < 1:2116958/102‑4 (MQ=255) gggTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGCCTGcccggg > 2:2116958/1‑99 (MQ=255) gTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACttt > 1:949193/1‑150 (MQ=255) gTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGCCTGcccgggt < 1:1823155/101‑5 (MQ=255) gTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGCCTGcccgggt > 2:1823155/1‑97 (MQ=255) cTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACCAACCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCa < 1:1353444/150‑1 (MQ=255) cTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCa < 2:2337895/150‑1 (MQ=255) cTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCa > 1:548334/1‑150 (MQ=255) cGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTTCTTGTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAggg < 1:1995634/150‑1 (MQ=255) cGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAggg > 1:569564/1‑150 (MQ=255) aCTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTg > 1:1363974/1‑150 (MQ=255) ttGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAg > 2:2316092/1‑141 (MQ=255) ttGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAg < 1:2316092/141‑1 (MQ=255) ttGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTggg > 2:1091236/1‑150 (MQ=255) tCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAgg > 1:1472917/1‑149 (MQ=255) tCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGa > 1:1129674/1‑150 (MQ=255) tCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGa > 1:1473428/1‑150 (MQ=255) gCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCaa < 2:2348303/95‑1 (MQ=255) gCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCaa > 1:2348303/1‑95 (MQ=255) aCCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGAAAGgc > 2:1581379/1‑150 (MQ=255) cGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGAAAGgcgc > 1:783863/1‑150 (MQ=255) ggCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCAATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGAAAGGcgcg < 1:1993622/150‑1 (MQ=255) ggCCCACACGATGGGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGAAAGGcgcg < 2:60003/150‑1 (MQ=255) gCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGAAAGGCGCgg > 1:662909/1‑150 (MQ=255) cccAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGAAAGGCGCGGa < 2:1169774/150‑1 (MQ=255) ccAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAAt > 1:1000999/1‑114 (MQ=255) ccAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAAt < 2:1000999/114‑1 (MQ=255) cAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGAAAGGCGCGGacc > 2:1585927/1‑150 (MQ=255) gACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGAAAGGCGCGGaccac > 2:772981/1‑150 (MQ=255) gACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGAAAGGCGCGGaccac < 2:783863/150‑1 (MQ=255) gtgAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCCGGGCGCTGTCGTCCGATTGTTTAGGCGCCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGAAAGGCGCGGACCACCTGccc < 1:1750578/150‑1 (MQ=255) gtgAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGAAGAATCGCGTTCGATGTGACTATGATCGCCCGCCCTTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGAAAGGCGCGGACCACCTGccc < 1:1750624/150‑1 (MQ=255) gAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGAAAGGCGCGGACCACCTGCCCGc < 1:1413212/150‑1 (MQ=255) gcttagaGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGAAAGGCGCGGACCACCTGCCCGCCTg > 2:595551/7‑150 (MQ=255) gCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGAAAGGCGCGGACCACCTGCCCGCCtt > 2:516407/1‑149 (MQ=255) gCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGAAAGGCGCGGACCACCTGCCCGCCTg > 1:1691612/1‑150 (MQ=255) tGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGAAAGGCGCGGACCACCTGCCCGCCTgcg > 1:1674712/1‑150 (MQ=255) tAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATgcgc > 1:1374707/1‑99 (MQ=255) tAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATgcgc < 2:1374707/99‑1 (MQ=255) ggCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTTGGCAGAAAGGCGCGGACCACCTGCCCGCCTGcgccgtcg > 1:301251/1‑150 (MQ=255) tgCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGAAAGGCGCGGACCACCTGCCCGCCTGCGCCGTCGCCGTg > 2:52741/1‑150 (MQ=255) tgCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGAAACCGCCCGTCAATTGGGGCCTTAGGGCGCACTTTCAGGGCATTGGGCAGAAAGGCGCGGACCACCTGCCCGCCTGCGCCGTCGCCGTg > 1:1484562/1‑150 (MQ=255) tCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATgc < 1:1763228/82‑1 (MQ=255) tCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATgc > 2:1763228/1‑82 (MQ=255) cGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGAAAGGCGCGGACCACCTGCCCGCCTGCGCCGTCGCCGTGGGGGCCGa < 2:1783775/150‑1 (MQ=255) cGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGAAAGGCGCGGACCACCTGCCCGCCTGCGCCGTCGCCGTGGGGGCCGa < 1:2429156/150‑1 (MQ=255) cGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGAAAGGCGCGGACCACCTGCCCGCCTGCGCCGTCGCCGTGGGGGCCGa < 2:1783785/150‑1 (MQ=255) gAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGAAAGGCGCGGACCACCTGCCCGCTGGCGCCGTCGCCGTGGGGGCCGAg < 1:2156180/150‑1 (MQ=255) gTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTg > 2:971340/1‑94 (MQ=255) gTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTg < 1:971340/94‑1 (MQ=255) tGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGAAAGGCGCGGACCACCTGCCCGCCTGCGCCGTCGCCGTGGGGGCCGAGTAcc < 2:569564/150‑1 (MQ=255) gcTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGAAAGGCGCGGACCACCTGCCCGCCTGCGCCGTCGCCGTGGGGGCCGAGTACCGCaaa > 2:1648864/1‑150 (MQ=255) tGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAg < 1:972899/79‑1 (MQ=255) tGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAg > 2:972899/1‑79 (MQ=255) tGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGAAAGGCGCGGACCACCTGCCCGCCTGCGCCGTCGCCGTGGGGGCCGAGTACCGCAAAAg < 2:1363974/150‑1 (MQ=255) aacaacCCGGGCAGGATGCCCTGCGTCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGAAAGGCGCGGACCACCTGCCCGCCTGCGCCGTCGCCGTGGGGGCCGAGTACCGCAAAAGGa > 2:1971203/1‑150 (MQ=255) acaacGCGGGCGTGCTTCCCTGATCCATTTCGGCAAGCACCCGCCCGTCATCCCGGTCCTGAACGCGCACTTTCAGGGCATTGGGCAGAAAGGCGCGGACCACCTGCCCGCCTGCGCCGTCGCCGTGGGGGCCGAGTACCGCAAAAGGAt < 2:301251/150‑1 (MQ=255) acaacCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGAAAGGCGCGGACCACCTGCCCGCCTGCGCCGTCGCCGTGGGGGCCGAGTACCGCAAAAGGAt > 2:816784/1‑150 (MQ=255) caacCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGAAAGGCGCGGACCACCTGCCCGCCTGCGCCGTCGCCGTGGGGGCCGAGTACCGCAAAAGGATc < 1:1416179/150‑1 (MQ=255) cccGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGAAAGGCGCGGACCACCTGCCCGCCTGCGCCGTCGCCGTGGGGGTCGAGTACCGCAAAAGGATCGGc < 1:52741/150‑1 (MQ=255) cccGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGAAAGGCGCGGACCACCTGCCCGCCTGCGCCGTCGCCGTGGGGGCCGAGTACCGCAAAAGGATCGGc > 2:2233756/1‑150 (MQ=255) cccGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGAAAGGCGCGGACCACCTGCCCGCCTGCGCCGTCGCCGTGGGGGCCGAGTACCGCAAAAGGATCGGc < 2:166712/150‑1 (MQ=255) cccGCGCAGGCTGCCCTGCTCCATTGCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCACTGGGCAGAAAGGCGCGGACCACCTGCCCGCCTGCGCCGTCGCCGTGGGGCCCGAGTACCGCAAAAGGATCGGc < 2:1190570/150‑1 (MQ=255) aGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGAAAGGCGCGGACCACCTGCCCGCCTGCGCCGTCGCCGTGGGGGCCGAGTACCGCAAAAGGATCGGCGTGTTCg > 2:1926184/1‑150 (MQ=255) | TGCCTTCCGCGAACAAGTGAAGGTCCATGTCTCCCAATTGCGGGCCGAAGCTGTAGGGGTCTTCGGTAACTTGCTCGCCACCGGCCCAGACGATGTGAAGCTGATAGGGCTGTGCCTTATCGAGGTGCGCGCTGAACAACCCGGGCAGGCTGCCCTGCTCCATTTCGGCAAGCACCCGCCCGTCATCCCGGGCCTGAATGCGCACTTTCAGGGCATTGGGCAGAAAGGCGCGGACCACCTGCCCGCCTGCGCCGTCGCCGTGGGGGCCGAGTACCGCAAAAGGATCGGCGTGTTCG > NC_002947/4579794‑4580089 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |