| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 384,786 | C→G | 8.3% | R421G (CGC→GGC) | PP_0320 → | methyl‑accepting chemotaxis transducer |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 384,786 | 0 | C | G | 8.3% | 371.2 / 19.8 | 121 | R421G (CGC→GGC) | PP_0320 | methyl‑accepting chemotaxis transducer |
| Reads supporting (aligned to +/- strand): ref base C (55/56); new base G (6/4); total (61/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.43e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.09e-01 | |||||||||||
Only 100 of 125 total aligned reads displayed.
GAGTACCTCCGAGCGGCTGCGACGGGCCGTGGAGCAGGTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAGGCGGCCGATGCGGTCAGCCAGCTGGCCGAC > NC_002947/384638‑384935 | gAGTACCTCCGAGCGGCTGCGACGGGCCGTGGAGCAGGTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCg > 1:657207/1‑150 (MQ=255)gAGTACCTCCGAGCGGCTGCGACGGGCCGTGGAGCAGGTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCg > 1:2293813/1‑150 (MQ=255) cTCCGAGCGGCTGCGACGGGCCGTGGAGCAGGTCACCCATGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGc > 1:564168/1‑150 (MQ=255) tCCGAGCGGCTGCGACGGGCCGTGGAGCAGGTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGcc > 1:432950/1‑150 (MQ=255) cGAGCGGCTGCGACGGGCCGTGGAGCAGGTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCgg < 1:570264/150‑1 (MQ=255) aGCGGCTGCGACGGGCCGTGGAGCAGGTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCGGCATTGCGGGCg < 1:2142165/150‑1 (MQ=255) cGGCTGCGACGGGCCGTGGAGCAGGTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCGGCATTGCGGGCGAt < 2:1428072/150‑1 (MQ=255) cTGCGACGGGCCGTGGAGCAGGTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCGGCATTGCGGGCGa > 2:1462340/1‑146 (MQ=255) cTGCGACGGGCCGTGGAGCAGGTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCGGCATTGCGGGCGa < 1:1462340/146‑1 (MQ=255) cTGCGACGGGCCGTGGAGCAGGTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCg > 1:1229584/1‑150 (MQ=255) aCGGGCCGTGGAGCAGGTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCa < 2:1650052/150‑1 (MQ=255) gCCGTGGAGCAGGTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCg < 1:1440795/150‑1 (MQ=255) ccGTGGAGCAGGTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGt < 2:2293813/150‑1 (MQ=255) cGTGGAGCAGGTAACCCAGGTGGTGGACAACACCGCCGGGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTc < 2:564168/150‑1 (MQ=255) cGTGGAGCAGGTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTc > 2:616520/1‑150 (MQ=255) cGTGGAGCAGGTAACACAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTc > 2:1435854/1‑150 (MQ=255) cGTCGAGCAGGTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCCATGGCGACGATGCGGCCCAGGCGTc < 2:1402926/150‑1 (MQ=255) ggAGCAGGTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCa < 1:1006381/150‑1 (MQ=255) aGCAGGTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGt < 1:667003/150‑1 (MQ=255) cAGGTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCg < 2:319211/150‑1 (MQ=255) cAGGTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCg > 1:676001/1‑150 (MQ=255) aGGTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCgg > 1:94623/1‑150 (MQ=255) ggTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGc > 2:912447/1‑150 (MQ=255) gTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCa > 2:1061140/1‑150 (MQ=255) gTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCa > 1:1060334/1‑150 (MQ=255) ccAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGccc < 1:678532/107‑1 (MQ=255) ccAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGccc > 2:678532/1‑107 (MQ=255) ccAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGc < 1:1598926/126‑1 (MQ=255) ccAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGc > 2:1598926/1‑126 (MQ=255) ccAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCacgaga > 2:2007952/1‑150 (MQ=255) gggtgcACATCACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAgg < 2:1955820/149‑1 (MQ=255) gACACCACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTg < 1:1209597/150‑1 (MQ=255) acaacaCCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGc > 1:580586/1‑150 (MQ=255) aacaCCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAg < 2:1356625/150‑1 (MQ=255) cacCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGc > 2:695385/1‑150 (MQ=255) ccgccgAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGc < 2:1560146/97‑1 (MQ=255) ccgccgAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGc > 1:1560146/1‑97 (MQ=255) cgAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCCCCGCAGG‑GTTCGCCCGTGAGGCCTGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGa < 1:290565/150‑1 (MQ=255) aGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAgg < 2:676001/150‑1 (MQ=255) aGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAgg > 2:1422807/1‑150 (MQ=255) gcTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAggtgg < 2:432950/150‑1 (MQ=255) cTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAggtggt < 1:1599614/150‑1 (MQ=255) tCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGc > 2:1262595/1‑95 (MQ=255) ggCGCCAGCAGGAGATGACCGAAATGGTCGGCACTGCTGTACACGAGATGGGCCTGA‑CCGTCCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAAc < 1:1018463/150‑1 (MQ=255) gccccAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACg < 1:513312/147‑1 (MQ=255) gcCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAGCGAt < 1:1817364/150‑1 (MQ=255) gcCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTACAGGCCCGCGAGGTGGTGCAACGAt > 1:1158522/1‑150 (MQ=255) gcCAGCAGGAGATGACCGAAATGGTCGCAACTTCTGGACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGAt > 2:90844/1‑150 (MQ=255) ccAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATc < 2:410321/150‑1 (MQ=255) gcagGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCacga < 2:2371850/109‑1 (MQ=255) agaTGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTg < 1:608323/150‑1 (MQ=255) gaTGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCaa < 1:406737/136‑1 (MQ=255) aTGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGTGGCGTTGCAGGCCCGCTAGGTGGTGCAACGATCCATTCGTGGc < 2:94623/150‑1 (MQ=255) aTGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGc < 2:397559/150‑1 (MQ=255) ccGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCg > 1:806067/1‑150 (MQ=255) cGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGa > 1:124996/1‑150 (MQ=255) cGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGa < 2:321450/150‑1 (MQ=255) cGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGa > 1:2294531/1‑150 (MQ=255) gAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCACCGGTCCCTTCGTGGCATCGAg > 2:1960289/1‑150 (MQ=255) gAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAg < 1:912447/150‑1 (MQ=255) aaTGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAggg < 1:1435854/150‑1 (MQ=255) tGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGCTCCATTCGTGGCATCGAGGGCa < 2:1060334/150‑1 (MQ=255) gCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCg > 1:2179006/1‑150 (MQ=255) ccACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCgg > 2:12007/1‑150 (MQ=255) cACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGTACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCggg < 2:1229584/150‑1 (MQ=255) aCTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGc > 2:370350/1‑150 (MQ=255) tACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCg < 1:30747/150‑1 (MQ=255) acacAAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGACACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCgg < 2:1187810/150‑1 (MQ=255) cacGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGc > 2:508149/1‑150 (MQ=255) acGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCa < 1:1061140/150‑1 (MQ=255) acGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCa > 2:2291613/1‑150 (MQ=255) acGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGCCCGACAtgccct < 1:2007952/150‑6 (MQ=255) cGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCaa < 1:2086975/150‑1 (MQ=255) gagaTGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAg < 1:508149/150‑1 (MQ=255) gagaTGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAg > 2:1796184/1‑150 (MQ=255) gagaTGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGCCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCAGGGCGGGCGACATCGGCAAg > 1:438902/1‑150 (MQ=255) agaTGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAgg < 1:1422807/150‑1 (MQ=255) agaTGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAgg < 1:803214/150‑1 (MQ=255) gaTGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCGAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAggc < 2:894755/150‑1 (MQ=255) gggCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCacga < 2:717249/67‑1 (MQ=255) gggCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCacga < 2:717260/67‑1 (MQ=255) gggCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCacga > 1:717260/1‑67 (MQ=255) gggCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCacga > 1:717249/1‑67 (MQ=255) gggCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAggcggc < 2:657207/150‑1 (MQ=255) ccTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCAAGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATATCGGGCGACATCGGCAAGGCTGCCGa > 2:737324/1‑150 (MQ=255) cTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATc < 1:1569561/101‑1 (MQ=255) cTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATc > 2:1569561/1‑101 (MQ=255) cTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAGGCGGCCGAt > 2:1117082/1‑150 (MQ=255) tGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAGGCGGCCGATg < 1:2050810/150‑1 (MQ=255) gA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAGGCGGCCGATGc < 1:2291613/150‑1 (MQ=255) a‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAGGCGGCCGATGCg < 2:524537/150‑1 (MQ=255) a‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAGGCGGCCGATGCg > 2:780349/1‑150 (MQ=255) cGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAGGCGGCCGATGCggg > 1:1950926/1‑149 (MQ=255) gcATCGCCGGCATTGCGGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAGGCGGCCGATGCGGTcagccagc > 2:424725/2‑150 (MQ=255) cATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAGGCGGCCGATGCGGTca > 2:2316114/1‑143 (MQ=255) cATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAGGCGGCCGATGCGGTca < 1:2316114/143‑1 (MQ=255) tCGCCGGCATTGCGGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGt > 2:534006/1‑92 (MQ=255) tCGCCGGCATTGCGGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAGGCGGCCGATGCGGTCAGCCAGCTgg > 1:1975288/1‑150 (MQ=255) ccGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAGGCGGCCGATGCGGTCAGCCAGCTGGCcga > 1:406039/1‑150 (MQ=255) cGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAGGCGGCCGATGCGGTCAGCCAGCTGGCcgac < 2:1087916/150‑1 (MQ=255) | GAGTACCTCCGAGCGGCTGCGACGGGCCGTGGAGCAGGTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGA‑CCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAGGCGGCCGATGCGGTCAGCCAGCTGGCCGAC > NC_002947/384638‑384935 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |