| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,827,099 | C→A | 9.5% | S1379I (AGT→ATT) ‡ | pvdL ← | non‑ribosomal peptide synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,827,099 | 0 | C | A | 9.5% | 410.0 / 19.3 | 135 | S1379I (AGT→ATT) ‡ | pvdL | non‑ribosomal peptide synthetase |
| Reads supporting (aligned to +/- strand): ref base C (63/59); new base A (6/7); total (69/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.26e-01 | |||||||||||
Only 100 of 136 total aligned reads displayed.
TGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAGGGCCGGCGAGCACCAGCTTGCAGCCGGTGACCAGC > NC_002947/4826958‑4827248 | tGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGc < 2:2190158/150‑1 (MQ=255) ggTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCgg < 2:1432826/150‑1 (MQ=255) gTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTCCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGc > 2:462358/1‑150 (MQ=255) tGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCAAGTGCCTGcagta < 2:2152569/150‑5 (MQ=255) tGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCAAGTGCCTGcagta < 1:1534293/150‑5 (MQ=255) tgTTGATGGCGGTTGCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCt < 2:853365/149‑1 (MQ=255) gTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTg > 1:1079550/1‑150 (MQ=255) gTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTg < 2:46416/150‑1 (MQ=255) tGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGTTACTGCAGGCACTTGCCTGCGGCTCCTGGa < 1:2233623/150‑1 (MQ=255) cGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAaca > 1:97630/1‑150 (MQ=255) cAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCa < 1:462358/150‑1 (MQ=255) aGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCaa < 2:1600366/150‑1 (MQ=255) aGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCaa > 2:1305515/1‑150 (MQ=255) tCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACa > 2:1266582/1‑150 (MQ=255) gggCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAgc > 1:1303996/1‑150 (MQ=255) ggCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAgcg > 1:1426924/1‑150 (MQ=255) ccATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAgcggc < 1:442739/150‑1 (MQ=255) cATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCCCCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTTGACGAACACCTGCAACAgcggcg < 2:1190172/150‑1 (MQ=255) cATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCAAGTGCCTGcag < 2:621999/121‑3 (MQ=255) tACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGt > 2:2439043/1‑150 (MQ=255) tACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGt < 1:1406871/150‑1 (MQ=255) aCCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTa > 2:26900/1‑150 (MQ=255) aCCGGTTGTGCAGTTGCACCTGCGGCAGCACCTACAGCACGCGGTCACGNAGCGTAATGGACAACGCTTAGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAAAACCTGCAACAGCGGCGGTa > 1:429870/1‑150 (MQ=255) ccGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTAc > 2:1824252/1‑150 (MQ=255) ccGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTAc > 1:778538/1‑150 (MQ=255) cGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACCGCAGGCAAGTGCCTGcagta > 1:308301/1‑114 (MQ=255) cGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACCGCAGGCAAGTGCCTGcagta < 2:308301/118‑5 (MQ=255) gCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCa < 2:429870/150‑1 (MQ=255) aGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGc > 2:1433696/1‑150 (MQ=255) gTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCt > 1:1551853/1‑102 (MQ=255) tGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTa < 1:2439043/150‑1 (MQ=255) tGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTa < 1:493098/150‑1 (MQ=255) cACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGt < 1:1937379/150‑1 (MQ=255) aCCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTTCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTc > 1:2204246/1‑150 (MQ=255) aCCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAac > 1:768739/1‑114 (MQ=255) aCCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAac < 2:768739/114‑1 (MQ=255) cTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCAc < 1:2223958/150‑1 (MQ=255) cTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCAc > 2:1922322/1‑150 (MQ=255) caCCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGAc > 1:913638/1‑99 (MQ=255) caCCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGAc < 2:913638/99‑1 (MQ=255) ccTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACaaa < 1:2449224/124‑1 (MQ=255) cTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCAt < 1:1067432/143‑1 (MQ=255) cTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTg > 2:1254710/1‑150 (MQ=255) cTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCGTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCAt > 2:1067432/1‑143 (MQ=255) tGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAGAGTGCAACGGAGTCACCCCATAAGCCTGc > 2:1136740/1‑150 (MQ=255) tGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGc > 1:705661/1‑150 (MQ=255) gcagcaCGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACGGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCa < 2:218353/150‑1 (MQ=255) caCGCGGTCACCAAGCGTGGCGGATAACGCTTCGCTTCACTAGAACACCCATCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGTGTAGTCACCCCATAAGCCTGCACCAg < 2:1203932/150‑1 (MQ=255) aCGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAgg < 2:97630/150‑1 (MQ=255) aCGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAgg < 1:1477691/150‑1 (MQ=255) cgGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCa < 2:1630763/150‑1 (MQ=255) gTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGCAAATCAGCATCAATGTCGTGATAAAGTGCAGCGTAGTCGCCCCATAAGCCGGCACCAGGGCAGc > 1:1474971/1‑150 (MQ=255) gTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGc < 1:115757/150‑1 (MQ=255) cGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATa < 2:1824424/150‑1 (MQ=255) cGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATa < 1:2094563/150‑1 (MQ=255) gCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAAGCACGTGCCTGCGGCTTTTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATAc > 1:292266/1‑150 (MQ=255) gCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACCGCAGGCAAGTGCCTGcagt < 2:1038323/71‑4 (MQ=37) gCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACCGCAGGCAAGTGCCTGcagt > 1:1038323/1‑68 (MQ=37) tGGCGGACAACGCTTCGACACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCg < 1:1305515/150‑1 (MQ=255) aaCGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGGACGCCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCAGATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGa > 2:94394/1‑150 (MQ=255) aaCCCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGCCGAACACCTGCAACAGCGGCGGTACACATTGGCGCGTAGTCACGCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGa < 1:893196/150‑1 (MQ=255) aCGCTTCGCCCCCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATCAGTCTTCACCAGGGCAGCGATACGCTGCGGGTCGCGAt < 1:1772586/150‑1 (MQ=255) gCTTCGCCACCCGAGAACACCCAGCGCAAGCTAATGCAGGCAATTAACTCTTGCTCCGTGATTAACACCTGCTACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGt > 1:1864014/1‑150 (MQ=255) ttCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACaaa > 2:1703986/1‑87 (MQ=255) ttCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTc > 2:1349902/1‑150 (MQ=255) gCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCGCCTGGACGAACACCTGCAACCGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCAcc < 1:157542/150‑1 (MQ=255) aCCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGc < 1:1868926/105‑1 (MQ=255) aCCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAgg < 1:819688/150‑1 (MQ=255) cccGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGGACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAggg > 2:1120008/1‑150 (MQ=255) ccGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCt < 2:1558487/105‑1 (MQ=255) ccGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCt > 1:1558487/1‑105 (MQ=255) ccGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCCCCAGGGc > 2:1092973/1‑150 (MQ=255) ccGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAGGGc > 1:364237/1‑150 (MQ=255) ccGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAGGGc > 2:2316547/1‑150 (MQ=255) cGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAGGGcc > 1:659454/1‑150 (MQ=255) gagaACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCTTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAGGGCCg > 1:1814289/1‑150 (MQ=255) gagaACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATg < 2:117003/137‑1 (MQ=255) gagaACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATg > 1:117003/1‑137 (MQ=255) gagaACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAGGGCCg < 2:778538/150‑1 (MQ=255) gagaACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAGGGCCg < 2:1556186/150‑1 (MQ=255) ccAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAgg > 2:1423054/1‑138 (MQ=255) ccAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAgg < 1:1423054/138‑1 (MQ=255) ccAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAGGGCCGGCGAGCAc > 2:2049034/1‑150 (MQ=255) ccAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAGGGCCGGCGAGCAc > 1:2028466/1‑150 (MQ=255) ccAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAGGGCCGGCGAGCAc > 1:1525369/1‑150 (MQ=255) aGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAGGGCCGGCGAGCACCa < 1:2316547/150‑1 (MQ=255) cgcAAGCTACTTCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAGGGCCGGCGAGCACCAGc < 2:2204246/150‑1 (MQ=255) cgcAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCAcc < 2:762563/131‑1 (MQ=255) ggagccgCAGGCAAGTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGCTACGCTGCTGGTTGCGATGTTCACCAGGGCCGGCGAGCACCAGCTTGCa > 1:1205278/7‑150 (MQ=255) tACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAGGGCCGGCGAGCACCAGCTTGCAGc > 2:846869/1‑150 (MQ=255) aCTGCAGGCACTGGCCTGCGGCTCCTGGACGAACACCTG‑AACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGGAGCGATACGCTGCGGGTCGCGATGTTCACCAGGGCCGGCGAGCACCAGCTTGCAGCCg < 2:577559/150‑1 (MQ=255) tGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCGCCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAGGGCCGGCGAGCACCAGCTTGCAGCCgg < 2:1474971/150‑1 (MQ=255) gCAGGCAAGTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAGGGCCGGCGAGCACCAGCTTGCAGCCGGt < 1:1090315/150‑1 (MQ=255) aGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAg > 2:1601473/1‑120 (MQ=255) aGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAg < 1:1601473/120‑1 (MQ=255) gCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTa < 1:1707139/60‑1 (MQ=255) aCTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAGGGCCGGCGa < 1:734199/125‑1 (MQ=255) aCTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAGGGCCGGCGa > 2:734199/1‑125 (MQ=255) aCTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAGGGCCGGCGAGCACCAGCTTGCAGCCGGTGACCAg > 2:2237292/1‑150 (MQ=255) cTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAGGGCCGGCGAGCACCAGCTTGCAGCCGGTGACCAGc > 1:569858/1‑150 (MQ=255) | TGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAGGGCCGGCGAGCACCAGCTTGCAGCCGGTGACCAGC > NC_002947/4826958‑4827248 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |