| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,855,065 | G→T | 5.8% | A27A (GCC→GCA) | dnaX ← | DNA polymerase III subunit gamma |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,855,065 | 0 | G | T | 5.8% | 297.3 / 3.9 | 95 | A27A (GCC→GCA) | dnaX | DNA polymerase III subunit gamma |
| Reads supporting (aligned to +/- strand): ref base G (46/43); new base T (2/4); total (48/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.35e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 101 total aligned reads displayed.
GAACAGGTGCCACAGGGCGTGGAGGTGATGCCGGTTTCACAGTTCAGGCACTTGGCGATAATACGGGCGATGGTCGTCTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCTGATCGAGCGGAAGATCGCTAATGCTAGCGGAGCGGGGGCAAAATTGCACC > NC_002947/4854916‑4855214 | gAACAGGTGCCACAGGGCGCGGAGGTGATGCCGGTTTCACAGTTCAGGCACTTGGCGATAATACGGGCGATGGTCGTCTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAg > 2:341813/1‑150 (MQ=255) aGGTGCCACAGGGCGTGGAGGTGATGCCGGTTTCACAGTTCAGGCACTTGGCGATAATACGGGCGATGGTCGTCTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCt < 2:852507/150‑1 (MQ=255) ggTGCCACAGGGCGTGGAGGTGATGCCGGTTTCACAGTGCAGGCACTTGGCGATAATACGGGCGATGGTCGTCTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCtt > 1:460743/1‑150 (MQ=255) gTGCCACAGGGCGTGGAGGTGATGCCGGTTTCACAGTTCAGGCACTTGGCGATAATACGGGCGATGGTCGTCTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCtt > 2:1504665/1‑149 (MQ=255) gTGCCACAGGGCGTGGAGGTGATGCCGGTTTCACAGTTCAGGCACTTGGCGATAATACGGGCGATGGTCGTCTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCtt < 1:1504665/149‑1 (MQ=255) tGCCACAGGGCGTGGAGGTGATGCCGGTTTCACAGTTCAGGCACTTGGCGATAATACGGGCGATGGTCGTCTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAg > 2:1550464/1‑143 (MQ=255) tGCCACAGGGCGTGGAGGTGATGCCGGTTTCACAGTTCAGGCACTTGGCGATAATACGGGCGATGGTCGTCTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAg < 1:1550464/143‑1 (MQ=255) tGCCACAGGGCGTGGAGGTGATGCCGGTTTCACAGTTCAGGCACTTGGCGATAATACGGGCGATGGTCGTCTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGa < 1:2128835/150‑1 (MQ=255) tGCCACAGGGCGTGGAGGTGATGCCGGTTTCACAGTTCAGGCACTTGGCGATAATACGGGCGATGGTCGTCTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGa < 2:2156169/150‑1 (MQ=255) cacaGGGCGTGGAGGTGATGCCGGTTTCACAGTTCAGGCACTTGGCGATAATACGGGCGATGGTCGTCTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGca > 2:2012087/1‑150 (MQ=255) caGGGCGTGGAGGTGATGCCGGTTTCACAGTTCAGGCACTTGGCGATAATACGGGCGATGGTCGTCTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCCTTGATCAATGCCTTggacaac < 1:1586564/150‑7 (MQ=255) gggCGTGGAGGTGATGCCGGTTTCACAGTTGGGGCACTGGGCGATACTACGGGCGATGGTCCTCTTGTGGCACGCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATg < 1:1223911/150‑1 (MQ=255) ggCGTGGAGGTGATGCCGGTTTCACAGTTCAGGCACTTGGCGATAATACGGGCGATGGTCGTCTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATgg < 2:2184422/150‑1 (MQ=255) ggCGTGGAGGTGATGCCGGTTTCACAGTTCAGGCACTTGGCGATAATACGGGCGATGGTCGTCTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATgg > 1:841577/1‑150 (MQ=255) ggCGTGGAGGTGATGCCGGTTTCACAGTTCAGGCACTTGGCGATAATACAGGCGATGGTCGTCTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATgg < 2:1760378/150‑1 (MQ=255) gAGGTGATGCCGGTTTCACAGTTCAGGCACTTGGCGATAATACGGGCGATGGTCGTCTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTgg > 2:298908/1‑150 (MQ=255) aGGTGATGCCGGTTTCACAGTTCAGGCACTTGGCGATAATACGGGCGATGGTCGTCTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGc < 2:1417343/150‑1 (MQ=255) gCCGGTTTCACAGTTCAGGCACTTGGCGATAATACGGGCGATGGTCGTCTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCAt > 1:1914918/1‑150 (MQ=255) acaGTTCAGGCACTTGGCGATAATACGGGCGATGGTCGTCTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATgg > 2:1034045/1‑127 (MQ=255) acaGTTCAGGCACTTGGCGATAATACGGGCGATGGTCGTCTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATgg < 1:1034045/127‑1 (MQ=255) ttCAGGCACTTGGCGATAATACGGGCGATGGTCGTCTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAg > 2:429058/1‑150 (MQ=255) cAGGCACTTGGCGATAATACGGGCGATGGTCGTCTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCtt < 2:257207/111‑1 (MQ=255) cAGGCACTTGGCGATAATACGGGCGATGGTCGTCTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCtt > 1:257207/1‑111 (MQ=255) cACTTGGCGATAATACGGGCGATGGTCGTCTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGa < 2:2149322/150‑1 (MQ=255) ttGGCGATAATACGGGCGATGGTCGTCTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGc > 1:896572/1‑150 (MQ=255) ttGGCGATAATACGGGCGATGGTCGTCTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGc > 2:2136597/1‑150 (MQ=255) ataataCGGGCGATGGTCGTCTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGAc < 1:1687751/142‑1 (MQ=255) ataataCGGGCGATGGTCGTCTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGAc > 2:1687751/1‑142 (MQ=255) taataCGGGCGATGGTCGTCTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGTTGGTTTTCCAAGGCATTGATCAATGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTc < 1:2121360/150‑1 (MQ=255) gCGATGGTCGTCTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTcgcg > 2:941167/1‑119 (MQ=255) gCGATGGTCGTCTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTcgcg < 1:941167/119‑1 (MQ=255) gATGGTCGTCTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAAc < 1:2136597/150‑1 (MQ=255) tcgtcTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCCTTGATCAATGCCtt < 2:2306446/82‑1 (MQ=255) tcgtcTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCCTTGATCAATGCCtt > 1:2306446/1‑82 (MQ=255) tcgtcTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGAt < 2:460743/150‑1 (MQ=255) tcgtcTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGAt > 1:648768/1‑150 (MQ=255) gtcTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATaa > 1:1303539/1‑150 (MQ=255) tcTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCCTTGATCAATGCCtt < 2:1023814/79‑1 (MQ=39) tcTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCCTTGATCAATGCCtt > 1:1023814/1‑79 (MQ=39) ttGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTc < 2:1914918/150‑1 (MQ=255) cccACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATc < 2:353052/150‑1 (MQ=255) cccACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTGCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATc > 1:133927/1‑150 (MQ=255) ccACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCg > 1:210231/1‑150 (MQ=255) cACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACAt < 1:1724409/80‑1 (MQ=255) cACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACAt > 2:1724409/1‑80 (MQ=255) aCCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAg < 1:232554/66‑1 (MQ=255) aCCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAg > 2:232554/1‑66 (MQ=255) cccGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTgg > 2:2017243/1‑85 (MQ=255) cccGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTgg < 1:2017243/85‑1 (MQ=255) ccGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCtt < 1:282728/68‑1 (MQ=255) ccGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCtt > 2:282728/1‑68 (MQ=255) ccGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGaaaaa > 2:1537671/1‑150 (MQ=255) ccGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGaaaaa > 2:1470555/1‑150 (MQ=255) gggTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGATCCTGCGCGGATGCCATTTTCGTTCAAGAACCTGATAACTCATCGAAAAACCAt < 1:298908/150‑1 (MQ=255) aCCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGACATGGAGTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTa > 1:2251432/1‑150 (MQ=255) cGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGc < 2:648768/150‑1 (MQ=255) gTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCt > 2:1527224/1‑150 (MQ=255) aCAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCTGATc > 2:1887957/1‑150 (MQ=255) ggTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCTGATCGAg < 1:1887957/150‑1 (MQ=255) gTAGTCATGGTTCAGGCGCTGGTTGTCAAACGCATTGATCAAGTCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGCAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCTGATCGAGc < 1:821115/150‑1 (MQ=255) gTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTg < 2:292739/104‑1 (MQ=255) gTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTg > 1:292739/1‑104 (MQ=255) gTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCTGATCGAGc > 2:1035486/1‑150 (MQ=255) gTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCTGATCGAGc > 1:1564340/1‑150 (MQ=255) gTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCTGATCGAGc > 1:688265/1‑150 (MQ=255) gTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCTGATCGAGc > 2:1758618/1‑150 (MQ=255) gCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGTCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCTGATCGAGCGGaa < 1:341813/150‑1 (MQ=255) aTGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTg < 2:288602/98‑1 (MQ=255) aTGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTg > 1:288602/1‑98 (MQ=255) gTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCTGATCGAGCGGAAGATCg > 2:1865241/1‑150 (MQ=255) tGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCTGATCGAGCGGAAGAt > 2:612468/1‑147 (MQ=255) tGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCTGATCGAGCGGAAGAt < 1:612468/147‑1 (MQ=255) gcgcTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCTGATCGAGCGGAAGATCGCTAATg < 2:841577/150‑1 (MQ=255) cTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCTGATCGAGCGGAAGATCGCTAATGCTa < 1:1537671/150‑1 (MQ=255) ggTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCTGATCGAGCGGAAGATCGCTAATGCTagc < 1:504588/150‑1 (MQ=255) gTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCTGATCGAGCGGAAGATCGCTAATGCTagcg < 1:1835805/150‑1 (MQ=255) gTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCTGATCGAGCGGAAGATCGCTAATGCTagcg > 2:1275642/1‑150 (MQ=255) cAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGc > 1:2022816/1‑78 (MQ=255) cAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGc < 2:2022816/78‑1 (MQ=255) cAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCTGATCGAGCGGAAGATCGCTAATGCTagcggagcgg < 1:980929/150‑1 (MQ=255) aaGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCAt < 1:219382/106‑1 (MQ=255) aaGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCAt > 2:219382/1‑106 (MQ=255) aaGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCTGATCGAGCGGAAGATCGCTAATGCTAGCGGAGCggg < 1:1275642/150‑1 (MQ=255) aGGCATTGATCAAGGCCTTGAGCACCTCGGTCTGTCCGACCATTTCGCGGAACGAGCGCCGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCTGATCGAGCGGAAGATCGCTAATGCTAGCGGAGCgggg < 2:896572/150‑1 (MQ=255) aGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGa < 1:1541611/86‑1 (MQ=255) aGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGa > 2:1541611/1‑86 (MQ=255) ggCATGGATCAAGGCGGTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAGCTCATCGAAAAACCATCGTAGCCTGATCGAGCGGAAGATCGCTAATGCTAGCGGAGCggggg < 2:699044/150‑1 (MQ=255) aTTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCTGATCGAGCGGAAGATCGCTAATGCTAGCGGAGCGGGGGCaa > 2:1343484/1‑150 (MQ=255) aTTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCTGATCGAGCGGAAGATCGCTAATGCTAGCGGAGCGGGGGCaa > 1:2335722/1‑150 (MQ=255) aTTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCTGATCGAGCGGAAGATCGCTAATGCTAGCGGAGCGGGGGCaa > 1:550289/1‑150 (MQ=255) aTCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCTGATCGAGCGGAAGATCGCTAATGCTAGCGGAGCGGGGGCAAAAtt > 1:186296/1‑150 (MQ=255) tCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCTGATCGAGCGGAAGATCGCTAATGCTAGCGGAGCGGGGGCAAAAtt < 2:58893/149‑1 (MQ=255) tCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCTGATCGAGCGGAAGATCGCTAATGCTAGCGGAGCGGGGGCAAAAtt > 1:58893/1‑149 (MQ=255) cAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCTGATCGAGCGGAAGATCGCTAATGCTAGCGGAGCGGGGGCAAAATTGc > 2:105485/1‑150 (MQ=255) aaGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCTGATCGAGCGGAAGATCGCTAATGCTAGCGGAGCGGGGGCAAAATTGCa > 1:673316/1‑150 (MQ=255) aaGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCTGATCGAGCGGAAGATCGCTAATGCTAGCGGAGCGGGGGCAAAATTGCa > 1:1469187/1‑150 (MQ=255) aaGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCTGATCGAGCGGAAGATCGCTAATGCTAGCGGAGCGGGGGCAAAATTGCa < 1:2012087/150‑1 (MQ=255) aaGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCTGATCGAGCGGAAGATCGCTAATGCTAGCGGAGCGGGGGCAAAATTGCa < 1:1470555/150‑1 (MQ=255) aGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCTGATCGAGCGGAAGATCGCTAATGCTAGCGGAGCGGGGGCAAAATTGCAc < 1:429058/150‑1 (MQ=255) ggCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCTGATCGAGCGGAAGATCGCTAATGCTAGCGGAGCGGGGGCAAAATTGCAcc > 1:1671233/1‑150 (MQ=255) | GAACAGGTGCCACAGGGCGTGGAGGTGATGCCGGTTTCACAGTTCAGGCACTTGGCGATAATACGGGCGATGGTCGTCTTGCCCACCCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGGCGCTGGTTGTCCAAGGCATTGATCAAGGCCTTGAGCACATGGGTCTGGCCGACCATTTCGCGGAACGAGCGCGGACGCCATTTTCGTGCAAGAACCTGATAACTCATCGAAAAACCATCGTAGCCTGATCGAGCGGAAGATCGCTAATGCTAGCGGAGCGGGGGCAAAATTGCACC > NC_002947/4854916‑4855214 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |