Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 4,914,277 A→C 7.3% L156R (CTG→CGG)  ccmF ← holocytochrome c synthetase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,914,2770AC 7.3% 261.5 / 8.4 93L156R (CTG→CGG) ccmFholocytochrome c synthetase
Reads supporting (aligned to +/- strand):  ref base A (38/48);  new base C (2/5);  total (40/53)
Fisher's exact test for biased strand distribution p-value = 6.95e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01

AGCCGGCCGCCGAGCAAGGCGGCAATGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCGGGAGAACACCGACACGGCAAAGGTCCAGCCGCC  >  NC_002947/4914130‑4914419
                                                                                                                                                   |                                                                                                                                               
aGCCGCCCGCCGAGCAAGGCGGAAATAGAGACCACGAAAGGCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGGGAACGATCAGGCCAAAGTCCTGAAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGgcagc                                                                                                                                               <  2:981314/150‑1 (MQ=255)
  ccggccgCCGAGCAAGGCGGCAATGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGcagcag                                                                                                                                             <  1:1815053/150‑1 (MQ=255)
  ccggccgCCGAGCAAGGCGGCAATGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGcagcag                                                                                                                                             <  1:1539737/150‑1 (MQ=255)
    ggccgCCGAGCAAGGCGGCAATGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGgc                                                                                                                                           >  1:937396/1‑150 (MQ=255)
      ccgccgAGCAAGGCGGCAATGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCTGCCGCAGgtgc                                                                                                                                        <  1:661284/150‑1 (MQ=255)
      ccgccgAGCAAGGCGGCAATGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCTGCCGCAGgtgc                                                                                                                                        <  1:1681504/150‑1 (MQ=255)
       cgccgAGCAAGGCGGCAATGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCt                                                                                                                                       >  1:2448599/1‑150 (MQ=255)
        gccgAGCAAGGCGGCAATGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGGAGAGCATGGGCAGGTGAAGGATCAGGCCAAAGTCCTGCAACAGAGGGTTGAGGTCACGGCCATCGGTCGGCACGTGCGgcaacacgggccg                                                                                                                                       >  2:1113327/1‑143 (MQ=255)
         ccgAGCAAGGCGGCAATGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCAGCGCCTGCTGCCGCAggtgccga                                                                                                                                      <  2:388917/150‑7 (MQ=255)
           gAGCAAGGCGGCAATGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGaa                                                                                                                                   <  1:432718/150‑1 (MQ=255)
            aGCAAGGCGGCAATGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAAc                                                                                                                                  <  1:825515/150‑1 (MQ=255)
              cAAGGCGGCAATGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACgg                                                                                                                                <  2:1609114/150‑1 (MQ=255)
                     gcAATGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGaa                                                                                                                         <  1:1489805/150‑1 (MQ=255)
                     gcAATGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGaa                                                                                                                         <  1:369907/150‑1 (MQ=255)
                        aTGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTa                                                                                                                      >  1:1318661/1‑150 (MQ=255)
                         tGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTaa                                                                                                                     <  1:916018/150‑1 (MQ=255)
                         tGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTaa                                                                                                                     <  1:1622809/150‑1 (MQ=255)
                         tGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTaa                                                                                                                     <  1:1813627/150‑1 (MQ=255)
                           gCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATg                                                                                                                   <  1:1155106/150‑1 (MQ=255)
                             gAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGAt                                                                                                                 >  1:1606591/1‑150 (MQ=255)
                               aCGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGAtca                                                                                                               <  1:272685/150‑1 (MQ=255)
                                     aaGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGtt                                                                                                                             <  2:221452/130‑1 (MQ=255)
                                     aaGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGtt                                                                                                                             >  1:221452/1‑130 (MQ=255)
                                         cACCGAGAAGCCCACATAGCGCATGTAGAGCATGGGCGGATGAACGATACGGCGGAAGTCCTGCAACAGCGGGGTGAGGTAACGGCCATCGGTCGGCACCTACGGCAGCAGGCGCTGGAACGGGTGGGAAGTAATGAtcaggacgctcag                                                                                                     >  2:334409/1‑150 (MQ=255)
                                         cACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGtt                                                                                                                             <  1:403455/126‑1 (MQ=255)
                                         cACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGtt                                                                                                                             >  2:403455/1‑126 (MQ=255)
                                         cACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAAt                                                                                                                    <  2:2331352/135‑1 (MQ=255)
                                         cACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAAt                                                                                                                    >  1:2331352/1‑135 (MQ=255)
                                         cACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGAtcaggaagctcag                                                                                                     >  2:1648330/1‑150 (MQ=255)
                                            cGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATGGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGAtcaggaagctcaggaa                                                                                                  >  2:1213625/1‑150 (MQ=255)
                                             gagaAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGAtcaggaagctcaggaag                                                                                                 <  2:214770/150‑1 (MQ=255)
                                                  gCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCCCACCACGGGCGATGTTGTACATGCGGCCGTAACGGGTTGGAAGTAATGATCAGGAAGCTCAGTAAGCCCAc                                                                                            >  1:876461/1‑150 (MQ=255)
                                                  gCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCGGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCAc                                                                                            >  2:546758/1‑150 (MQ=255)
                                                   cccACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAAc                                                                                                                                  >  2:2211837/1‑111 (MQ=255)
                                                   cccACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAAc                                                                                                                                  <  1:2211837/111‑1 (MQ=255)
                                                    ccATATAGCCGATGTAGAGCATGGGTGGGTGAACGACCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGc                                                                                          >  2:1008769/1‑150 (MQ=255)
                                                    ccACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCGCAGGAGGCCCACGc                                                                                          >  1:1696490/1‑150 (MQ=255)
                                                     cacaTAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGTAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCt                                                                                         >  2:1863903/1‑150 (MQ=255)
                                                       caTAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCGCAGGAAGCCCACGCTGa                                                                                       <  2:937396/150‑1 (MQ=255)
                                                        aTAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGAt                                                                                      <  1:932694/150‑1 (MQ=255)
                                                        aTAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGAt                                                                                      >  2:1721356/1‑150 (MQ=255)
                                                          aGCCCATGTACAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGAtcagga                                                                                                            <  2:1805745/126‑1 (MQ=255)
                                                          aGCCCATGTACAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGAtcagga                                                                                                            >  1:1805745/1‑126 (MQ=255)
                                                           gCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCAt                                                                                   <  1:1213625/150‑1 (MQ=255)
                                                           gCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCAt                                                                                   >  1:2303533/1‑150 (MQ=255)
                                                             ccATGTAGAGCATGGGTGGGTGACCGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGc                                                                                 <  1:1113327/150‑1 (MQ=255)
                                                             ccATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCTGCCGCAggtgcc                                                                                                                                        >  2:1318072/1‑92 (MQ=255)
                                                             ccATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCTGCCGCAGgtgcc                                                                                                                                       <  1:1318072/96‑2 (MQ=255)
                                                             ccATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGc                                                                                 <  1:1721356/150‑1 (MQ=255)
                                                             ccATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGc                                                                                 >  2:468665/1‑150 (MQ=255)
                                                             ccATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGc                                                                                 <  1:334409/150‑1 (MQ=255)
                                                             ccATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGc                                                                                 >  1:2070071/1‑150 (MQ=255)
                                                              cATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGcc                                                                                <  1:2106166/150‑1 (MQ=255)
                                                              cATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGcc                                                                                <  2:1375666/150‑1 (MQ=255)
                                                                    ctacATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTAc                                                                          <  1:712862/147‑1 (MQ=255)
                                                                         tgggtgggTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCa                                                                     <  1:1653941/150‑1 (MQ=255)
                                                                         tgggtgggTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCa                                                                     <  2:1870754/150‑1 (MQ=255)
                                                                            gtgggtgAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCa                                                                  >  2:65687/1‑150 (MQ=255)
                                                                              gggtgAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACggg                                                                                                                               >  2:1470862/1‑87 (MQ=255)
                                                                              gggtgAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACggg                                                                                                                               <  1:1470862/87‑1 (MQ=255)
                                                                               ggtgAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCAcgc                                                               <  2:2303533/150‑1 (MQ=255)
                                                                                 tgAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACgg                                                                                                                                <  1:188510/83‑1 (MQ=255)
                                                                                 tgAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACgg                                                                                                                                >  2:188510/1‑83 (MQ=255)
                                                                                 tgAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCgg                                                             <  1:978926/150‑1 (MQ=255)
                                                                                 tgAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCgg                                                             <  1:1285683/150‑1 (MQ=255)
                                                                                      gATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAg                                                        <  2:2070071/150‑1 (MQ=255)
                                                                                            gCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGtt                                                                                                                             >  1:242366/1‑75 (MQ=255)
                                                                                            gCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGtt                                                                                                                             <  2:242366/75‑1 (MQ=255)
                                                                                            gCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCAc                                                  >  1:1385043/1‑150 (MQ=255)
                                                                                                aaGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGc                                              <  2:593750/150‑1 (MQ=255)
                                                                                                  gTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGAGCCAGCATCACCTGCgg                                            >  1:739590/1‑150 (MQ=255)
                                                                                                     cTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCGGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCaa                                         <  1:546758/150‑1 (MQ=255)
                                                                                                     cTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCaa                                         <  2:421425/150‑1 (MQ=255)
                                                                                                      tGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAAc                                        >  2:1674135/1‑150 (MQ=255)
                                                                                                       gCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACt                                       <  1:1674135/150‑1 (MQ=255)
                                                                                                          aCAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGcc                                    >  2:2274410/1‑150 (MQ=255)
                                                                                                           cAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCg                                   >  2:1089296/1‑150 (MQ=255)
                                                                                                            aGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGAAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCgg                                  <  1:1008769/150‑1 (MQ=255)
                                                                                                              cGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCGGga                                <  2:2448599/150‑1 (MQ=255)
                                                                                                                      ggTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCGGga                                <  1:432517/142‑1 (MQ=255)
                                                                                                                      ggTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCGGga                                >  2:432517/1‑142 (MQ=255)
                                                                                                                           cGGCCATCGGTCGGAACCTGCGGCCGACGGATCGCCATCGGCGTGGAAGCAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCGGGAGAACACCGACACg                   <  2:1841272/150‑1 (MQ=255)
                                                                                                                            ggCNATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCGGGAGAACACCGACACgg                  >  2:1515067/1‑150 (MQ=255)
                                                                                                                              ccATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGTAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACATGCGGCAACTGCACAGAGAACACCGACACGGCa                >  1:1307064/1‑150 (MQ=255)
                                                                                                                                aTCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTaa                                                                                                                     <  1:1790560/47‑1 (MQ=255)
                                                                                                                                aTCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTaa                                                                                                                     >  2:1790560/1‑47 (MQ=255)
                                                                                                                                 tcggtcggCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCGGGAGAACACCGACACg                   >  2:217485/1‑144 (MQ=255)
                                                                                                                                 tcggtcggCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCGGGAGAACACCGACACg                   <  1:217485/144‑1 (MQ=255)
                                                                                                                                 tcggtcggCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCGGGAGAACACCGACACGGCAAAg             <  1:468665/150‑1 (MQ=255)
                                                                                                                                 tcggtcggCACCTGCGGCAGCAGGCGCGGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCGGGAGAACACCGACACGGCAAAg             <  1:679298/150‑1 (MQ=255)
                                                                                                                                  cggtcggCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCGGGAGAACACCGACACGGCAAAgg            <  1:1648330/150‑1 (MQ=255)
                                                                                                                                      cagcgccTGCTGCCGCAGGTGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCGGGAGAACACCGACACGGCAAAGGTCCa        >  1:54848/6‑150 (MQ=255)
                                                                                                                                          aCCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCgg                                  <  1:2313490/120‑1 (MQ=255)
                                                                                                                                          aCCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCgg                                  >  2:2313490/1‑120 (MQ=255)
                                                                                                                                            cTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCGGGAGAACACCGacac                    >  2:759209/1‑132 (MQ=255)
                                                                                                                                            cTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCGGGAGAACACCGacac                    <  1:759209/132‑1 (MQ=255)
                                                                                                                                            cTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCGGGAGAACACCGACACGGCAAAGGTCCAgccgcc  >  1:1786359/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                               
AGCCGGCCGCCGAGCAAGGCGGCAATGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGCGCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCGGGAGAACACCGACACGGCAAAGGTCCAGCCGCC  >  NC_002947/4914130‑4914419

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: