| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,930,187 | G→C | 5.8% | L10L (CTC→CTG) | cheA ← | chemotaxis histidine kinase CheA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,930,187 | 0 | G | C | 5.8% | 274.3 / 7.1 | 86 | L10L (CTC→CTG) | cheA | chemotaxis histidine kinase CheA |
| Reads supporting (aligned to +/- strand): ref base G (43/38); new base C (2/3); total (45/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.96e-01 | |||||||||||
AGCTGAAGGAAGCCGGCGCCCCCTTTTACAGTGTGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCGGCATGAATCTGCGGACCTTCACCCCGAGTCGGATG > NC_002947/4930038‑4930333 | aGCTGAAGGAAGCCGGCGCCCCCTTTTACAGTGTGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTgg < 1:1237272/150‑1 (MQ=255)aGCTGAAGGAAGCCGGCGCCCCCTTTTACAGTGCGGCCATCGCGAAAGCTAGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTgg < 2:1146104/150‑1 (MQ=255) gCTGAAGGAAGCCGGCGCCCCCTTTTACAGTGTGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTgga < 2:1954596/150‑1 (MQ=255) gCTGAAGGAAGCCGGCGCCCCCTTTTACAGTGTGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTgga < 1:486964/150‑1 (MQ=255) gCTGAAGGAAGCCGGCGCCCCCTTTTACAGTGTGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTgga > 2:454298/1‑150 (MQ=255) gCTGAAGGAAGCCGGCGCCCCCTTTTACAGTGTGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTgga < 1:492441/150‑1 (MQ=255) ggaagCCGGCGCCCCCTTTTACAGTGTGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTTCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGAttt > 1:1454287/1‑150 (MQ=255) ggaagCCGGCGCCCCCTTTTACAGTGTGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTgga < 2:213647/144‑1 (MQ=255) ggaagCCGGCGCCCCCTTTTACAGTGTGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTgga > 1:213647/1‑144 (MQ=255) ggaagCCGGCGCCCCCTTTTACAGTGTGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGAttt > 1:33772/1‑150 (MQ=255) gaagCCGGCGCCCCCTTTTACAGTGTGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATttc < 1:2029907/150‑1 (MQ=255) gCCGGCGCCCCCTTTTACAGTGTGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAACTCCTGGAGGATttcctc < 2:989678/150‑1 (MQ=255) ccGGCGCCCCCTTTTACAGTGTGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTCCAGGATttcctgg < 2:1916304/150‑5 (MQ=255) cTTTTACAGTGTGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGa > 2:282421/1‑150 (MQ=255) aCAGTGTGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCtc < 2:1673257/150‑1 (MQ=255) aGTGTGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGCAGCtcat > 2:354170/1‑150 (MQ=255) gtgtGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCtcatc > 2:1081191/1‑150 (MQ=255) tgGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCaaa > 2:648436/1‑150 (MQ=255) ggAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAAc < 1:2289166/150‑1 (MQ=255) ggAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAAc < 1:569975/150‑1 (MQ=255) aaCCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTg > 2:484878/1‑150 (MQ=255) gcgAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTcc > 1:1275570/1‑150 (MQ=255) gATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTaaaa > 1:1236609/1‑150 (MQ=255) gATCGCATTGAGCAGGTCGGCATAGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTaaaa > 1:2052596/1‑150 (MQ=255) aTCGCATTGAGCAGGTCGGCATCGTCAGGTCGGGTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCACACGTGCTCCTTaaaaa > 2:505545/1‑150 (MQ=255) tCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAAc > 1:126453/1‑150 (MQ=255) gCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCa < 2:740274/150‑1 (MQ=255) aTTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAg > 1:223380/1‑150 (MQ=255) ttGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAgg < 1:282421/150‑1 (MQ=255) gAGCAGGTCGGCATCGTCAGGTCGGCTTTCAAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCt < 2:1275570/150‑1 (MQ=255) gTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTaaaa > 2:1033543/1‑135 (MQ=255) gTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTaaaa < 1:1033543/135‑1 (MQ=255) ggCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGAcagcag > 2:1433089/1‑150 (MQ=255) ggCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGAcagcag > 2:1433198/1‑150 (MQ=255) gCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAACACCACGGCTGGACCGCTGa < 2:33772/150‑1 (MQ=255) aTCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGatc > 2:976193/1‑150 (MQ=255) aTCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTCCAGGATttcctg > 1:1091424/1‑90 (MQ=255) aTCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTCCAGGATttcctg < 2:1091424/93‑4 (MQ=255) cGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGatcat < 2:1455179/150‑1 (MQ=255) gTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGatcatc < 1:339555/150‑1 (MQ=255) gTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGatcatc < 1:1498342/150‑1 (MQ=255) tCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATAATCg > 2:1812543/1‑150 (MQ=255) gTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGAcag > 2:1021102/1‑136 (MQ=255) gTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGAcag < 1:1021102/136‑1 (MQ=255) tCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAAc < 1:2174166/122‑1 (MQ=255) tCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAAc > 2:2174166/1‑122 (MQ=255) tCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATc > 2:1872596/1‑150 (MQ=255) cgatcttCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTTTTCCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCg < 2:2276798/145‑1 (MQ=255) ggCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTCCAGGATttcc > 2:1318430/1‑79 (MQ=255) ggCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTCCAGGATttcc < 1:1318430/80‑2 (MQ=255) ccAGCTCGACCAGTTGCTCGGACAAAAGTTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGtagatcg > 1:2276798/1‑144 (MQ=255) tCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGac < 1:102833/150‑1 (MQ=255) ccAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCg > 1:1733454/1‑143 (MQ=255) ccAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCg < 2:1733454/143‑1 (MQ=255) ttGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTc < 1:742132/150‑1 (MQ=255) ttGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTc > 2:2083146/1‑150 (MQ=255) cTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTc < 1:1094608/150‑1 (MQ=255) ggACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACacga < 1:1635518/140‑1 (MQ=255) ggACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACacga > 2:1635518/1‑140 (MQ=255) aCAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCt > 1:223411/1‑150 (MQ=255) cAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCtt < 1:1433198/150‑1 (MQ=255) cAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCtt < 1:1433089/150‑1 (MQ=255) aaTTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTa > 1:2107417/1‑150 (MQ=255) ttGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATc > 1:151221/1‑150 (MQ=255) gCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCgg < 1:1081191/150‑1 (MQ=255) tCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGTACAGCAGATCATCGACATCGTCATGACCGGACACGACGTCTTCACGCTTATCGGCa < 1:1872596/150‑1 (MQ=255) tCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCGGCa > 2:542020/1‑150 (MQ=255) tCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCGGCa > 1:651902/1‑150 (MQ=255) cAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCt < 2:672364/77‑1 (MQ=255) cAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCt > 1:672364/1‑77 (MQ=255) cAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTACAAACCCTGCCTGGATAGCGGATCGGCGGCGTCGTGCTGACCTGACACGACGTCTTCACGCTTATCGGCAt < 1:648436/150‑1 (MQ=255) aaGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGc < 1:274386/72‑1 (MQ=255) aaGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGc > 2:274386/1‑72 (MQ=255) aaGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTaaaa < 2:713166/81‑1 (MQ=255) aaGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTaaaa < 2:712359/81‑1 (MQ=255) aaGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTaaaa > 1:712359/1‑81 (MQ=255) aaGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTaaaa > 1:713166/1‑81 (MQ=255) tttCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGt > 1:1286369/1‑126 (MQ=255) tttCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCGGCGTGAATCt > 2:652099/1‑150 (MQ=255) tttCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCGGCATGAATCt > 2:728878/1‑150 (MQ=255) tttCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCGGCATGAATCt > 2:100111/1‑150 (MQ=255) tttCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCCTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGt < 2:1286369/126‑1 (MQ=255) cGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAATCCAAGGCTGGACAGCAGTTCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCGGCATGAATCTGCg < 2:1236609/150‑1 (MQ=255) ccTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCGGCATGAATCTGCGGACCtt < 1:484878/150‑1 (MQ=255) ctctACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCGGCATGAATCTGCGGACCTTc > 2:637012/1‑150 (MQ=255) tACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCGGCATGAATCTGCGGACCTTCAcc > 2:1005784/1‑150 (MQ=255) ccAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCGGCATGAATCTGCGGACCTTCAcccc > 2:186475/1‑150 (MQ=255) ccAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCGGCATGAATCTGCGGACCTTCAcccc > 2:80563/1‑150 (MQ=255) ccAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCGGCATGAATCTGCGGACCTTCAcccc < 1:976193/150‑1 (MQ=255) aGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCGGCATGAATCTGCGGACCTTCACCCCGa < 2:2052596/150‑1 (MQ=255) aGGAAATCCTGGAGAATATCTTCATCGGCACCGAAGCTCATCAAACGAGCTCCTTAAAAACCAAGGCTGGACAACATATCATCGACATCGTCCTGACCGGACACAACATCTTCACGCTTATCGGCATGAATCTGCAGACCTTCACACCGa > 2:1456599/1‑150 (MQ=255) aaaTCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCGGCATGAATCTGCGGACCTTCACCCCGAGTc < 1:186475/150‑1 (MQ=255) tCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCGGCATGAATCTGCGGACCTTCACCCCGAGTCGGa < 2:247958/150‑1 (MQ=255) cTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCGGCATGAATCTGCGGACCTTCACCCCGAGTCGGATg < 1:2083146/150‑1 (MQ=255) | AGCTGAAGGAAGCCGGCGCCCCCTTTTACAGTGTGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCGGCATGAATCTGCGGACCTTCACCCCGAGTCGGATG > NC_002947/4930038‑4930333 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |