| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 416,124 | G→C | 7.6% | D297H (GAC→CAC) | waaC → | ADP‑heptose‑‑LPS heptosyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 416,124 | 0 | G | C | 7.6% | 320.1 / 13.8 | 106 | D297H (GAC→CAC) | waaC | ADP‑heptose‑‑LPS heptosyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (49/48); new base C (3/5); total (53/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.16e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.81e-01 | |||||||||||
Only 100 of 106 total aligned reads displayed.
CGGCGGCAAAGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCA‑CTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGCGAGCCGCTTGAGCGCGTTGC > NC_002947/415981‑416271 | cggcggcAAAGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCA‑CTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGc < 1:761027/150‑1 (MQ=255) cggcAAAGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCA‑CTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCtt < 1:1962838/150‑1 (MQ=255) tgcAAAGGCCCGCGTGGCGGTCGATACCGGCCTTGGCCACCTGG‑GCCCGCAGCGCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTCACTGGCCtgg < 1:1969634/149‑3 (MQ=255) gcAAAGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCA‑CTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTgc < 1:1013010/150‑1 (MQ=255) gcAAAGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCA‑CTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTgc < 2:1087108/150‑1 (MQ=255) gcAAAGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCA‑CTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTCACTGGCCtggt < 1:576554/150‑4 (MQ=255) gcAAAGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCA‑CTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTCACTGGCCtggt < 2:2065170/150‑4 (MQ=255) aGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCA‑CTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCtggtgaat < 2:881062/150‑8 (MQ=255) aGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCA‑CTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTc < 1:1280135/150‑1 (MQ=255) gCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCA‑CTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTccc > 2:706724/1‑150 (MQ=255) gTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCA‑CTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTcc > 2:1551501/1‑143 (MQ=255) gTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCA‑CTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCcctgccgg > 1:2343119/1‑148 (MQ=255) ggCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCA‑CTCGATGTGCCCACCCTTTCGCGGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCa < 1:1207517/150‑1 (MQ=255) ggTCGATACCGGCCTTGGCCACCTGGCGGCGGCA‑CTCTATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCagaa < 2:2092253/150‑1 (MQ=255) gATACCGGCCTTGGCCACCTGGCGGCGGCA‑CTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGaagaag > 2:1612774/1‑150 (MQ=255) aTACCGGCCTTGGCCACCTGGCGGCGGCA‑CTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGTAGAAGAAGt > 2:2006685/1‑150 (MQ=255) aCCGGCCTTGGCCACCTGGCGGCGGCA‑CTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGc < 1:1612774/150‑1 (MQ=255) aCCGGCCTTGGCCACCTGGCGGCGGCA‑CTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGAGCCTACGGACGGACCCAAAAGTTCCAAGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGc < 1:416212/150‑1 (MQ=255) ccGGCCTTGGCCACCTGGCGGCGGCA‑CTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGcc > 1:1645302/1‑149 (MQ=255) cGGCCTTGGCCACCTGGCGGCGGCA‑CTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGCCTGGCCTTGCGCTCCCGGCCTCCAGAAGAAGTGCAc > 2:1962475/1‑150 (MQ=255) cGGCCTTGGCCACCTGGCGGCGGCA‑CTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCAc > 1:1254741/1‑150 (MQ=255) cGGCCTTGGCCACCTGGCGGCGGCA‑CTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCAc < 2:2294737/150‑1 (MQ=255) cGGCCTTGGCCACCTGGCGGCGGCA‑CTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGCGACGGGCCTTGCGCCCCCTGCCTGCAGAAGAAGTGCAc > 1:616441/1‑150 (MQ=255) ggCCTTGGCCACCTGGCGGCGGCA‑CTCGATGTGCCCACCCTTTCGCTGTTCGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCAcc < 2:1254741/150‑1 (MQ=255) ccTTGGCCACCTGGCGGCGGCA‑CTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTa < 1:1149117/150‑1 (MQ=255) ttGGCCACCTGGCGGCGGCA‑CTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTg < 1:1646572/118‑1 (MQ=255) ttGGCCACCTGGCGGCGGCA‑CTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTg > 2:1646572/1‑118 (MQ=255) ggCCACCTGGCGGCGGCA‑CTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACaaa > 1:1962041/1‑150 (MQ=255) gCCACCTGGCGGCGGCA‑CTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGCCTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAAc < 2:292414/150‑1 (MQ=255) ggcTGGCGGCGGCA‑CTAGATGTGCACACCCTTTCGCTGTTTGGCCATACCAACACGGGCCTGCCTGGCGCCTAAGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGa < 2:2343119/148‑1 (MQ=255) aCCTGGCGGCGGCA‑CTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGa < 1:2181867/150‑1 (MQ=255) ggcggcA‑CTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGa < 2:1302346/150‑1 (MQ=255) gcggcA‑CTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGAt < 2:968209/150‑1 (MQ=255) gcA‑CTCGATGTGCTCAGACTTTCGCTGTTTAGCGCTACTAACCGGGTCCAGGTTTGCGCCTACGGTCGGTCCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGAc > 2:627256/1‑150 (MQ=255) gCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGtt > 2:1443858/1‑150 (MQ=255) cccACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAGGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTc > 2:2270259/1‑150 (MQ=255) cccACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTc > 1:1050575/1‑150 (MQ=255) cccACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTc > 2:374451/1‑150 (MQ=255) ccACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCg > 1:306437/1‑150 (MQ=255) ccACCCTTTAGCTGTTTGGCTCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCg > 2:2041050/1‑150 (MQ=255) cACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGa > 2:237484/1‑150 (MQ=255) aCCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGAt < 1:1828274/150‑1 (MQ=255) cccTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATc > 2:1673203/1‑150 (MQ=255) tttCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCTCCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGa > 1:119082/1‑150 (MQ=255) cTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAAcgc < 2:717106/150‑1 (MQ=255) cTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGc > 1:205513/1‑150 (MQ=255) aCCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCtg > 1:637007/1‑150 (MQ=255) aCCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCtg < 1:863735/150‑1 (MQ=255) ccAACCCGGGCCTGACTGGCGCCTACGGACGGAGCCTGAACCCCCCATCCGGCAATAAAAGTTGCCCTCGCGGCGTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCtgt > 1:647901/1‑150 (MQ=255) ccAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCtgt > 1:2261126/1‑150 (MQ=255) aaCCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCTCCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGc < 2:119082/150‑1 (MQ=255) aaCCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGc > 2:1370225/1‑150 (MQ=255) aCCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGa > 1:637662/1‑136 (MQ=255) aCCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGa < 2:637662/136‑1 (MQ=255) cccGGGCCTGACTGGCGCATACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGAc < 2:2453002/109‑1 (MQ=255) cccGGGCCTGACTGGCGCATACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGAc > 1:2453002/1‑109 (MQ=255) gCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTc < 1:1261654/150‑1 (MQ=255) gCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTc > 1:1325345/1‑150 (MQ=255) cTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGc > 1:484520/1‑150 (MQ=255) tGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCtg < 2:1180881/133‑1 (MQ=255) tGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCtg > 1:1180881/1‑133 (MQ=255) gcgcCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCcctgcct > 2:1532273/1‑58 (MQ=255) gcgcCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCcctgcct < 1:1532273/58‑1 (MQ=255) gcgcCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATc < 2:2261126/150‑1 (MQ=255) gcgcCTACGGACGGACCCAGATTCACCAGGCCAGTGACTAGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATc < 2:647901/150‑1 (MQ=255) ccTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTAc > 1:2162864/1‑74 (MQ=255) ccTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTAc < 2:2162864/74‑1 (MQ=255) cTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGa < 1:1673203/150‑1 (MQ=255) cTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGa < 2:678203/150‑1 (MQ=255) cTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGa > 1:1578808/1‑150 (MQ=255) tACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGa > 2:697052/1‑116 (MQ=255) tACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGa < 1:697052/116‑1 (MQ=255) tACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAg < 2:637007/150‑1 (MQ=255) gacggacCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCAtg < 1:706724/150‑1 (MQ=255) ggacCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTgg > 1:1137887/1‑150 (MQ=255) ggacCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTgg < 2:616441/150‑1 (MQ=255) acCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGATCATGTgg < 1:607841/148‑1 (MQ=255) acCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGATCATGTgg > 2:607841/1‑148 (MQ=255) cccAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGCGa < 1:1370225/150‑1 (MQ=255) ccAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCAtgt < 1:980531/144‑1 (MQ=255) ccAGATTCACCAGGCCAGGGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTCACTCACGAGCAGGTGGCGAg > 2:816644/1‑150 (MQ=255) aGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGCGAGcc > 1:374760/1‑150 (MQ=255) tCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGCGAGCCGCtt < 2:1578808/150‑1 (MQ=255) gcaaGGCCAGTCACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCtgtg < 1:818984/106‑1 (MQ=255) gcaaGGCCAGTCACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCtgtg > 2:818984/4‑109 (MQ=255) gcaaGGCCAGTCACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGCGAGCCGCTTGa > 1:2310419/4‑150 (MQ=255) aCCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCt > 1:498777/1‑111 (MQ=255) aCCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGCGAGCCGCTTGa > 2:713965/1‑150 (MQ=255) ccAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGCGAGCCGCTTGAg > 2:316790/1‑150 (MQ=255) ccAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGCGAGCCGCTTGAg > 2:56890/1‑150 (MQ=255) taGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGACGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGaa < 1:1333384/121‑1 (MQ=255) cAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGaa > 2:1333384/1‑122 (MQ=255) cAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGCGAGCCGCTTGAgc > 1:1898978/1‑150 (MQ=255) cAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGCGAGCCGCTTGAgc > 1:1133378/1‑150 (MQ=255) cAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGCGAGCCGCTTGAgc > 2:2103990/1‑150 (MQ=255) aaGGCCAGTCACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGa < 1:1966414/87‑1 (MQ=255) aaGGCCAGTCACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGa > 2:1966414/2‑88 (MQ=255) gCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGCGAGCCGCTTGAGcgcg < 1:713965/150‑1 (MQ=255) gCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGCGAGCCGCTTGAGcgcg > 1:1375067/1‑150 (MQ=255) gTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGCGAGCCGCTTGAGCGCGTtgc > 1:100055/1‑150 (MQ=255) | CGGCGGCAAAGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCA‑CTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGCGAGCCGCTTGAGCGCGTTGC > NC_002947/415981‑416271 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |