| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,047,313 | T→A | 5.2% | intergenic (+246/+202) | PP_5683 → / ← PP_5684 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,047,313 | 0 | T | A | 5.2% | 334.1 / 4.4 | 107 | intergenic (+246/+202) | PP_5683/PP_5684 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (44/56); new base A (3/3); total (47/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 111 total aligned reads displayed.
TCCGCTTGCCTTTCGGAGTATCCATCAACTTCCACCGAGTCATCTCAGATACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCATGAACATGCGGATGAACTAAAGCAGCTGGGTTCGCGCCAGGAAAAGCGTTGAAGTGACGTTGCTGCCCCAGCTC > NC_002947/5047168‑5047461 | gCCTTTCGGAGTATCCATCAACTTCCACCGAGTCATCTCAGATACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGa < 1:1321455/150‑1 (MQ=255) gCCTTTCGGAGTATCCATCAACTTCCACCGAGTCATCTCAGATACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCATCAGAGGCCTGctt < 1:1770409/150‑3 (MQ=255) ccTTTCGGAGTATCCATCAACTTCCACCGAGTCATCTCAGATACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCATCAGAGGCCTGctta < 2:1360159/150‑4 (MQ=255) tttCGGAGTATCCATCAACTTCCACCGAGTCATCTCAGATACACTTGGCGTCAGGAAGCGTCGGCACGACCACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCg > 1:137896/1‑150 (MQ=255) gAGTATCCATCAACTTCCACCGAGTCATCTCAGATACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTaaaa > 1:1063061/1‑150 (MQ=255) gTATCCATCAACTTCCACCGAGTCATCTCAGATACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAAtt < 1:1793491/150‑1 (MQ=255) tCCATGAACTCCCACCGAGTCATCTCAGATACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGt < 2:54272/150‑1 (MQ=255) tCCATCAACTTCCACCGAGTCATCTCAGATACACTTGGCGTCAGGAAGCGTCGGCACGACCACCGTTCCATAAAGGCAATTACATTGTCCACGTTGCAGATGCCCGGGTTTTATAATCAGTCCTCTGATGCCTGCGACCGTAAAATTGGt < 2:1465938/150‑1 (MQ=255) tCCATCAACTTCCACCGAGTCATCTCAGATACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGt < 2:1551420/150‑1 (MQ=255) tCCATCAACTTCCACCGAGTCATCTCAGATACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTACGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGt < 2:1399146/150‑1 (MQ=255) tCAACTTCCACCGAGTCATCTCAGATACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCa > 1:1094036/1‑150 (MQ=255) aaCTTCCACCGAGTCATCTCAGATACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGGAAAATTGGTCGCaaa < 2:2040015/150‑1 (MQ=255) aaCTTCCACCGAGTCATCTCAGATACACTTGGCGTCAGGAAGCGAGGGCACGACAACCGTCCCATTACGGGCCCAGCTATGACAACAATACCCACCAAGGGGAATGATCAGCAGGCCTCTGATGCCTGCGCCCGTACAATTGGTCGCaaa > 2:758148/1‑150 (MQ=255) aCTTCCACCGAGTCATCTCAGATACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAAc < 2:230533/150‑1 (MQ=255) ttCCACCGAGTCATCTCAGATACACTTGGCGTCCGGCAGCGTCGGCACGCCACCCGCGCCCTCCAGGGCCCACCGAGGACCACAATAGCGAGCAAGGGGACTGATAGGCAGGCCTCTTGTGCGTGCGACCGTAAACTTTGTCGCAAAcca > 2:1155708/1‑148 (MQ=255) ttCCACCGAGTCATCTCAGATACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGa > 2:76870/1‑150 (MQ=255) tCCACCGAGTCATCTCAGATACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCCAGGACCCACCTATGACCAAAATACCGAGCGCGGAGCATGAACCGCACGCCTGTAATGCTGCCGACGGACAAATTGGGCGCAAACGAc > 2:260856/1‑150 (MQ=255) cACCGAGTCATCTCAGATACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCt > 2:2319838/1‑150 (MQ=255) aCCGAGTCATCTCAGATACAGTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCATCAGAGGCCTGcttatc > 1:1209891/1‑122 (MQ=255) aCCGAGTCATCTCAGATACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTg > 1:743115/1‑150 (MQ=255) cATGTCAGATACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCt < 2:1094036/150‑1 (MQ=255) cATCTCAGATACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCt < 1:1635397/150‑1 (MQ=255) cATCTCAGATACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCt < 1:76870/150‑1 (MQ=255) tctcAGATACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCaaa > 1:1610242/1‑134 (MQ=255) tctcAGATACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCaaa < 2:1610242/134‑1 (MQ=255) tctcAGATACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGa > 1:1821261/1‑150 (MQ=255) tctcAGATACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGa > 1:986307/1‑150 (MQ=255) tcAGATACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGa > 1:1027062/1‑135 (MQ=255) tcAGATACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGa < 2:1027062/135‑1 (MQ=255) tcAGATACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAAt < 1:1959121/150‑1 (MQ=255) tcAGATACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAAt < 2:1132209/150‑1 (MQ=255) tcAGATACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAAt > 1:1132209/1‑150 (MQ=255) tcAGATACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTACGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAAt < 1:1961665/150‑1 (MQ=255) tcAGATACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCCCACACGGGCACTGATAAGAAAGCCCAGAATGACTACCGTCGTGGGATGGGGCGGGAACGACCGGCCTTTCTGAAt < 2:25386/150‑1 (MQ=255) aGATACACTTGGCGTCAGGAAGCGTCGTCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTGTCCGAAGCa < 2:1271719/150‑1 (MQ=255) aGATACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCa < 2:1932538/150‑1 (MQ=255) aGATACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCa < 2:2058301/150‑1 (MQ=255) gATACACTTGGCGTCAGGAAGCGTCGGCACTACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAg < 1:2272/150‑1 (MQ=255) gATACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCa < 2:149501/149‑1 (MQ=255) aTACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTCCGACCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAgg < 1:23193/150‑1 (MQ=255) acacTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGac > 1:1856927/1‑150 (MQ=255) acTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGacac > 1:2347592/1‑150 (MQ=255) ttGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGTTGGCTTTCTGCCTTTCTGAATCAGGACACGc < 1:62499/150‑1 (MQ=255) ttGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGc > 1:385146/1‑150 (MQ=255) ttGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGc < 1:2139850/150‑1 (MQ=255) ttGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGc > 2:2341581/1‑150 (MQ=255) ttGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGc > 2:2139850/1‑150 (MQ=255) aGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGc > 1:1829312/1‑150 (MQ=255) gAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGacac > 1:265098/1‑138 (MQ=255) gAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGacac < 2:265098/138‑1 (MQ=255) gCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGc < 1:1323415/150‑1 (MQ=255) cGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGcc < 1:2129222/150‑1 (MQ=255) tCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCa > 1:935718/1‑150 (MQ=255) ggCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCATg > 2:1433840/1‑150 (MQ=255) cGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCATGAACa < 2:743115/150‑1 (MQ=255) cGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCATGAACa < 2:1063061/150‑1 (MQ=255) aCAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGCCCCGCTTCCCCGCATTGCCCTTTAACAtt < 2:1107888/150‑2 (MQ=255) aaCCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCATGCCTCTGATGCCTGCGACCGTAAAATGGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCATGAACATGCg < 1:708553/150‑1 (MQ=255) aaCCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCATGAACATGCg > 2:1966519/1‑150 (MQ=255) aCCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGc > 1:1743997/1‑103 (MQ=255) aCCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGc < 2:1743997/103‑1 (MQ=255) cGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCATGAACATGCg > 1:1503808/1‑147 (MQ=255) ttCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCATGAACATGCGGATGa > 2:1536732/1‑150 (MQ=255) tCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCATGAACATGCGGATGaa < 2:1856927/150‑1 (MQ=255) ccATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCATGAACATGCGGATGAAc < 2:470365/150‑1 (MQ=255) aTCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGATAACCCGAAACAGGACACGCTTGGCCGCATTGCCCATGAACATGCGGATGAACTa > 2:1242678/1‑150 (MQ=255) cAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCATGAACATGCGGATGAACTaaa < 2:1855306/150‑1 (MQ=255) gggCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCATGaa < 2:588557/130‑1 (MQ=255) gggCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCATGaa > 1:588557/1‑130 (MQ=255) cccACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCATGAACATGCGGATGAACTAAAGCAGCt > 1:2033331/1‑150 (MQ=255) ccACCTATGACCACAATACCGAGCCAGGGGAGTGAGAAGCAGGCCTCAGAAGCCTGCGACCGTAAAATGGGGCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCATGAACATGCGGATGAACTAAAGCAGCTg > 2:627009/1‑150 (MQ=255) ccACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCATGAACATGCGGATGAACTAAAGCAGCTg > 2:1753790/1‑150 (MQ=255) cACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGAcc < 1:234523/82‑1 (MQ=255) cACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGAcc > 2:234523/1‑82 (MQ=255) cACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCATGAACATGCGGATGAACTAAAGCAGCTgg < 1:2319838/150‑1 (MQ=255) cACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCATGAACATGCGGATGAACTAAAGCAGCTgg < 2:235913/150‑1 (MQ=255) cTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGAc < 1:1542161/107‑1 (MQ=255) cTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGAc > 2:1542161/1‑107 (MQ=255) aCCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCATGAACATGCGGATGAACTAAAGCAGCTGGGTTCgcgc > 2:1684782/1‑150 (MQ=255) caATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCATGAACATGCGGATGAACTAAAGCAGCTGGGTTCGCGCCAgg > 1:1525880/1‑150 (MQ=255) tACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTACAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCATGAACATGCGGATGAACTAAAGCAGCTGGGTTCGCGCCAGGaaa < 2:1027282/150‑1 (MQ=255) aCCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCATGAACATGCGGATGAACTAAAGCAGCTGGGTTCGCGCCAGGaaaa < 2:1676610/150‑1 (MQ=255) gAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGcc > 2:2140546/1‑100 (MQ=255) gAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGcc < 1:2140546/100‑1 (MQ=255) aGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCATGAACATGCGGATGAACTAAAGCAGCTGGGTTCGCGCCAGGAAAAGCGTTGaa < 2:2159812/150‑1 (MQ=255) aGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCATGAACATGCGGATGAACTAAAGCAGCTGGGTTCGCGCCAGGAAAAGCGTTGaa < 2:2347592/150‑1 (MQ=255) aGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCGGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCATGAACATGCGGATGAACTAAAGCAGCTGGGTTCGCGCCAGGAAAAGCGTTGaa < 1:27153/150‑1 (MQ=255) ggggAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCAt > 1:1437940/1‑97 (MQ=255) ggggAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCAt < 2:1437940/97‑1 (MQ=255) gggAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCATGAACATGCGGATGAACTAAAGCAGCTGGGTTCGCGCCAGGAAAAGCGTTGAAGt < 1:1536732/150‑1 (MQ=255) ggAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCATGAACATGCGGATGAACTAAAGCAGCTGGGTTCGCGCCAGGAAAAGCGTTGAAGTg > 2:175088/1‑150 (MQ=255) aTAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCATGAACATGCGGATGAACTAAAGCAGCTGGGTTCGCGCCAGGAAAAGCGTTGAAGTGACGTtg > 1:1509891/1‑150 (MQ=255) tAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCAt > 1:828510/1‑88 (MQ=255) tAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCAt < 2:828510/88‑1 (MQ=255) gCAGGCATCAGAGGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCATGAACATGCGGATGAACTAAAGCAGCTGGGTTCGCGCCAGGAAAAGCGTTGAAGTGACGTtgctgc > 2:546751/1‑150 (MQ=255) aGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCATGAACATGCGGATGAACTAAAGCAGCTGGGTTCGCGCCAGGAAAAGCGTTGAAGTGACGTTGCTGccc < 1:1966519/150‑1 (MQ=255) ggCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCATGAACATGCGGATGAACTAAAGCAGCTGGGTTCGCGCCAg < 2:1442485/121‑1 (MQ=255) ggCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCATGAACATGCGGATGAACTAAAGCAGCTGGGTTCGCGCCAg > 1:1442485/1‑121 (MQ=255) ctctGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCATGAACATGCGGATGAACTAAAGCAGCTGGGTTCGCGCCAGGAAAAGCGTTGAAGTGACGTTGCTGCCCCAGc > 1:201766/1‑150 (MQ=255) ctctGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGAACAGTAACATGCGGATGAACTAAAGCAGCTGGGTTCGCGCCGGGAAAAGCGTTGAAGTGACGTTGCTGCCCCAGc > 1:156679/1‑150 (MQ=255) | TCCGCTTGCCTTTCGGAGTATCCATCAACTTCCACCGAGTCATCTCAGATACACTTGGCGTCAGGAAGCGTCGGCACGACAACCGTTCCATCAAGGGCCCACCTATGACCACAATACCGAGCAAGGGGAATGATAAGCAGGCCTCTGATGCCTGCGACCGTAAAATTGGTCGCAAACGACCTGCCTTTCTGAATCAGGACACGCTTGACCGCATTGCCCATGAACATGCGGATGAACTAAAGCAGCTGGGTTCGCGCCAGGAAAAGCGTTGAAGTGACGTTGCTGCCCCAGCTC > NC_002947/5047168‑5047461 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |