Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 5,171,255 | T→A | 6.5% | intergenic (+128/+55) | PP_4548 → / ← fadD‑I | oxidoreductase/long‑chain‑fatty acid‑‑CoA ligase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 5,171,255 | 0 | T | A | 6.5% | 407.3 / 14.2 | 135 | intergenic (+128/+55) | PP_4548/fadD‑I | oxidoreductase/long‑chain‑fatty acid‑‑CoA ligase |
Reads supporting (aligned to +/- strand): ref base T (61/65); new base A (4/5); total (65/70) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.18e-01 |
Only 100 of 136 total aligned reads displayed.
ATGCTTGAGAAGCTGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTCGCGGCGCAGGATCTTGCCCACGTTGGTGGTCGGCAGCGAATCGC > NC_002947/5171107‑5171404 | aTGCTTGAGAAGCTGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCGAAGCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTc > 1:1205611/1‑150 (MQ=255) cTTGAGAAGCTGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTCTGTCGCGGAAGGGGCGCA‑AACCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTcgcg < 2:1327489/150‑1 (MQ=255) tttagaAGCGGCTCTGACTTGGTCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCgg < 2:510052/147‑1 (MQ=39) tGAGAAGCTGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGc < 2:609825/150‑1 (MQ=255) tGAGAAGCTGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGc < 1:814094/150‑1 (MQ=255) gagaAGCTGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGTGCCGCGTCGCGGcc > 1:1695830/1‑150 (MQ=255) gaAGCTGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCt > 1:660640/1‑150 (MQ=255) gaAGCTGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGACGCGGCCCt < 2:935166/150‑1 (MQ=255) aaGCTGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGACGCGGCCCtg < 1:207109/150‑2 (MQ=255) aGCTGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCttt < 1:1080426/150‑1 (MQ=255) gCTGCGCTGAGTTGAGCATACAGGGTCTCACAATGTCTGAAGGCGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTc < 2:1840154/150‑1 (MQ=255) tGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCTCA‑AAGCGCCGCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTcgc < 2:1285696/150‑1 (MQ=255) tGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTcgc > 1:2184245/1‑150 (MQ=255) tGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTcgc > 2:262922/1‑150 (MQ=255) cgcTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGa < 2:1060064/150‑1 (MQ=255) cgcTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGa < 1:1563647/150‑1 (MQ=255) cgTTGCCCCTACAGGGACTCACAATGTCGGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGa < 2:527767/149‑1 (MQ=255) aGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGa < 1:2341831/150‑1 (MQ=255) gTTGCGCCTACAGGGACTCACAATGTCTGAAGCCGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAg < 1:1372890/150‑1 (MQ=255) gTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAg < 1:383446/150‑1 (MQ=255) ttGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAgg < 2:610224/150‑1 (MQ=255) gcgcCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGgcc > 2:2173686/1‑150 (MQ=255) ccTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGgccgcc < 2:1941386/150‑1 (MQ=255) ccTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGgccgcc < 2:660640/150‑1 (MQ=255) ccTAAAGGGAATTAGAAGGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGgccgcc < 2:61194/150‑1 (MQ=39) cTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTAGCGAAAGGGGCGCACCAGTG‑GCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGccc > 1:885126/1‑150 (MQ=255) aGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCcac > 1:1352540/1‑150 (MQ=255) aGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCcac > 2:1778008/1‑150 (MQ=255) aGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCcac > 1:2024070/1‑150 (MQ=255) aCTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTg > 1:971625/1‑150 (MQ=255) cTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGa < 2:1352540/150‑1 (MQ=255) cTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGa > 2:705737/1‑150 (MQ=255) tCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAg > 1:1804909/1‑150 (MQ=255) tCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCCCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAg > 2:2409515/1‑150 (MQ=255) tCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGACGCGGCCCtgg < 2:195036/122‑3 (MQ=255) tCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGACGCGGCCCtgg > 1:195036/1‑120 (MQ=255) acaATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCg > 2:2440921/1‑150 (MQ=255) caATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGt < 1:1879247/150‑1 (MQ=255) caATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGt < 1:1555381/150‑1 (MQ=255) aaTGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTg > 1:1503435/1‑150 (MQ=255) aGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCATGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTtgt < 2:2268228/150‑1 (MQ=255) gccgcATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGACGCGGCCCtg < 1:2443589/101‑2 (MQ=255) gccgcATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGACGCGGCCCtg > 2:2443589/1‑100 (MQ=255) ccgcATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGc > 1:968957/1‑150 (MQ=255) aTCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGAtc < 2:885126/150‑1 (MQ=255) ttATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTcgc < 1:835611/97‑1 (MQ=255) ttATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTcgc > 2:835611/1‑97 (MQ=255) ttATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGAtcttc < 2:339321/150‑1 (MQ=255) ttATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGAtcttc < 2:968957/150‑1 (MQ=255) ttATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGAtcttc > 1:1788530/1‑150 (MQ=255) ttANTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGAtcttc > 2:1500944/1‑150 (MQ=255) aTTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATcttctt < 1:2228173/150‑1 (MQ=255) ttGTGGGGCCTTGAGCCGCGAAAGGGGCGCA‑AAGCGCCCCCGGCCATTGATGCATCGCCGCCGGAATGCCGGGGCCGTGTCGCGGCCCCTTCCCGAGACCGGGCCGCCCCCAGCCAGAGCGTGCAGGATTGTGGGCAGGCGATcttcttt > 2:251174/1‑149 (MQ=255) tgtgGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCa > 1:114043/1‑150 (MQ=255) gtgGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCaa < 2:1670377/150‑1 (MQ=255) ggCCTTGTGTCGCGAAGGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCt > 2:1222467/1‑150 (MQ=255) ggCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCt > 2:1470059/1‑150 (MQ=255) gCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCacac < 2:2156917/108‑1 (MQ=255) cTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGc < 2:1804909/150‑1 (MQ=255) cTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGc > 1:1309958/1‑150 (MQ=255) gtgtCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGcttc < 1:2173686/150‑1 (MQ=255) gtCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGcttctt < 1:1222467/150‑1 (MQ=255) gtCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGcttctt < 1:2148891/150‑1 (MQ=255) gtCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGcttctt < 2:698585/150‑1 (MQ=255) tCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAg < 1:628623/123‑1 (MQ=255) tCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTg > 2:2130322/1‑150 (MQ=255) cgcgAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGa < 1:262922/150‑1 (MQ=255) gcgAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAg > 1:2089457/1‑150 (MQ=255) gcgAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAg < 2:2024070/150‑1 (MQ=255) cgAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGc < 1:1500944/150‑1 (MQ=255) ggggCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTtc > 2:1373534/1‑150 (MQ=255) gcgcA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTtcatc < 1:1545342/150‑1 (MQ=255) cA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACg > 2:806225/1‑150 (MQ=255) a‑aaGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCTCACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTATTGAGCTCTTCATCACGc < 2:1370724/150‑1 (MQ=255) a‑aaGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGc > 1:1569343/1‑150 (MQ=255) a‑aaGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAAGCCGAAACCACGCGGAGCGCGCAGGCCTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGc > 2:1775161/1‑150 (MQ=255) ccccAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTcgc > 1:1578914/1‑150 (MQ=255) cccAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTcg < 1:2180744/55‑1 (MQ=255) cccAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTcgcg < 1:2440921/150‑1 (MQ=255) cccAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTcgcg < 1:705737/150‑1 (MQ=255) cccAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTcgcg < 1:2130322/150‑1 (MQ=255) gCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGtt < 1:2319143/142‑1 (MQ=255) gCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCCTGCTTCTTGAGCTCTTCCTCCCGCACTTCGCCgcgc > 2:1579446/1‑150 (MQ=255) ccATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTCGCGGNGCa < 2:1503435/150‑1 (MQ=255) gATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTCGCGGCGCAGGATc > 1:1957005/1‑150 (MQ=255) tCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTCGCGGCGCAGGATCTTGccc < 2:2184245/150‑1 (MQ=255) ccgAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCACACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTCGCGGCGCAGGATCTTGCCCACGTtg < 2:1857121/150‑1 (MQ=255) cgAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTCGCGGCGCAGGATCTTGCCCACGTtgg < 2:1957005/150‑1 (MQ=255) aaaTCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTCGCGGCGCAGGATCTTGCCCACGTtggtg < 1:1322555/150‑1 (MQ=255) aTCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTCGCGGCGCAGGATCTTGCCCACGTTggtggt > 2:2045460/1‑150 (MQ=255) ccAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTCGCGGCGCAGGATCTTGCCCACGTTTGTGGTCgg > 2:1308970/1‑150 (MQ=255) ccAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTCGCGGCGCAGGATCTTGCCCACGTTGGTGGTCgg > 1:1086849/1‑150 (MQ=255) aGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTCGCGGCGCAGGATCTTGCCCACGTTGGTGGTCGGCa < 2:219270/150‑1 (MQ=255) gggCCGCGACGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTCGCGGCGCAGGATCTTGCCCACGTTGGTGGTCGGCAg > 2:1219975/1‑150 (MQ=255) ggCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATcttctt > 2:365784/1‑77 (MQ=255) ggCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATcttctt < 1:365784/77‑1 (MQ=255) gCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTCGCGGCGCAGGATCTTGCCCACGTTGGTGGTCGGCAGCg < 2:2370591/150‑1 (MQ=255) ccGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTCGCGGCGCAGGATCTTGCCCACGTTGGTGGTCGGCAGCGa > 2:434091/1‑150 (MQ=255) cgTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTCGCGGCGCAGGATCTTGCCCACGTTGGTGGTCGGCAGCGAATc < 2:1695830/150‑1 (MQ=255) tCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTCGCGGCGCAGGATCTTGCCCACGTTGGTGGTCGGCAGCGAATcgc < 1:1008952/150‑1 (MQ=255) | ATGCTTGAGAAGCTGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCA‑AAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTCGCGGCGCAGGATCTTGCCCACGTTGGTGGTCGGCAGCGAATCGC > NC_002947/5171107‑5171404 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |