Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,171,255 T→A 6.5% intergenic (+128/+55) PP_4548 → / ← fadD‑I oxidoreductase/long‑chain‑fatty acid‑‑CoA ligase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,171,2550TA 6.5% 407.3 / 14.2 135intergenic (+128/+55)PP_4548/fadD‑Ioxidoreductase/long‑chain‑fatty acid‑‑CoA ligase
Reads supporting (aligned to +/- strand):  ref base T (61/65);  new base A (4/5);  total (65/70)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.18e-01

Only 100 of 136 total aligned reads displayed.

ATGCTTGAGAAGCTGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTCGCGGCGCAGGATCTTGCCCACGTTGGTGGTCGGCAGCGAATCGC  >  NC_002947/5171107‑5171404
                                                                                                                                                     |                                                                                                                                                     
aTGCTTGAGAAGCTGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCGAAGCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTc                                                                                                                                                      >  1:1205611/1‑150 (MQ=255)
   cTTGAGAAGCTGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTCTGTCGCGGAAGGGGCGCAAACCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTcgcg                                                                                                                                                   <  2:1327489/150‑1 (MQ=255)
    tttagaAGCGGCTCTGACTTGGTCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCgg                                                                                                                                                  <  2:510052/147‑1 (MQ=39)
     tGAGAAGCTGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGc                                                                                                                                                 <  2:609825/150‑1 (MQ=255)
     tGAGAAGCTGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGc                                                                                                                                                 <  1:814094/150‑1 (MQ=255)
      gagaAGCTGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGTGCCGCGTCGCGGcc                                                                                                                                                >  1:1695830/1‑150 (MQ=255)
        gaAGCTGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCt                                                                                                                                              >  1:660640/1‑150 (MQ=255)
        gaAGCTGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGACGCGGCCCt                                                                                                                                              <  2:935166/150‑1 (MQ=255)
         aaGCTGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGACGCGGCCCtg                                                                                                                                             <  1:207109/150‑2 (MQ=255)
          aGCTGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCttt                                                                                                                                            <  1:1080426/150‑1 (MQ=255)
           gCTGCGCTGAGTTGAGCATACAGGGTCTCACAATGTCTGAAGGCGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTc                                                                                                                                           <  2:1840154/150‑1 (MQ=255)
             tGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCTCAAAGCGCCGCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTcgc                                                                                                                                         <  2:1285696/150‑1 (MQ=255)
             tGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTcgc                                                                                                                                         >  1:2184245/1‑150 (MQ=255)
             tGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTcgc                                                                                                                                         >  2:262922/1‑150 (MQ=255)
               cgcTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGa                                                                                                                                       <  2:1060064/150‑1 (MQ=255)
               cgcTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGa                                                                                                                                       <  1:1563647/150‑1 (MQ=255)
                    cgTTGCCCCTACAGGGACTCACAATGTCGGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGa                                                                                                                                  <  2:527767/149‑1 (MQ=255)
                    aGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGa                                                                                                                                  <  1:2341831/150‑1 (MQ=255)
                     gTTGCGCCTACAGGGACTCACAATGTCTGAAGCCGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAg                                                                                                                                 <  1:1372890/150‑1 (MQ=255)
                     gTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAg                                                                                                                                 <  1:383446/150‑1 (MQ=255)
                      ttGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAgg                                                                                                                                <  2:610224/150‑1 (MQ=255)
                        gcgcCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGgcc                                                                                                                              >  2:2173686/1‑150 (MQ=255)
                           ccTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGgccgcc                                                                                                                           <  2:1941386/150‑1 (MQ=255)
                           ccTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGgccgcc                                                                                                                           <  2:660640/150‑1 (MQ=255)
                           ccTAAAGGGAATTAGAAGGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGgccgcc                                                                                                                           <  2:61194/150‑1 (MQ=39)
                            cTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTAGCGAAAGGGGCGCACCAGTGGCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGccc                                                                                                                          >  1:885126/1‑150 (MQ=255)
                                aGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCcac                                                                                                                      >  1:1352540/1‑150 (MQ=255)
                                aGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCcac                                                                                                                      >  2:1778008/1‑150 (MQ=255)
                                aGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCcac                                                                                                                      >  1:2024070/1‑150 (MQ=255)
                                    aCTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTg                                                                                                                  >  1:971625/1‑150 (MQ=255)
                                     cTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGa                                                                                                                 <  2:1352540/150‑1 (MQ=255)
                                     cTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGa                                                                                                                 >  2:705737/1‑150 (MQ=255)
                                      tCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAg                                                                                                                >  1:1804909/1‑150 (MQ=255)
                                      tCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCCCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAg                                                                                                                >  2:2409515/1‑150 (MQ=255)
                                      tCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGACGCGGCCCtgg                                                                                                                                            <  2:195036/122‑3 (MQ=255)
                                      tCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGACGCGGCCCtgg                                                                                                                                            >  1:195036/1‑120 (MQ=255)
                                        acaATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCg                                                                                                              >  2:2440921/1‑150 (MQ=255)
                                         caATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGt                                                                                                             <  1:1879247/150‑1 (MQ=255)
                                         caATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGt                                                                                                             <  1:1555381/150‑1 (MQ=255)
                                          aaTGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTg                                                                                                            >  1:1503435/1‑150 (MQ=255)
                                                   aGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCATGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTtgt                                                                                                   <  2:2268228/150‑1 (MQ=255)
                                                          gccgcATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGACGCGGCCCtg                                                                                                                                             <  1:2443589/101‑2 (MQ=255)
                                                          gccgcATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGACGCGGCCCtg                                                                                                                                             >  2:2443589/1‑100 (MQ=255)
                                                           ccgcATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGc                                                                                           >  1:968957/1‑150 (MQ=255)
                                                               aTCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGAtc                                                                                       <  2:885126/150‑1 (MQ=255)
                                                                  ttATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTcgc                                                                                                                                         <  1:835611/97‑1 (MQ=255)
                                                                  ttATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTcgc                                                                                                                                         >  2:835611/1‑97 (MQ=255)
                                                                  ttATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGAtcttc                                                                                    <  2:339321/150‑1 (MQ=255)
                                                                  ttATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGAtcttc                                                                                    <  2:968957/150‑1 (MQ=255)
                                                                  ttATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGAtcttc                                                                                    >  1:1788530/1‑150 (MQ=255)
                                                                  ttANTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGAtcttc                                                                                    >  2:1500944/1‑150 (MQ=255)
                                                                    aTTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATcttctt                                                                                  <  1:2228173/150‑1 (MQ=255)
                                                                     ttGTGGGGCCTTGAGCCGCGAAAGGGGCGCAAAGCGCCCCCGGCCATTGATGCATCGCCGCCGGAATGCCGGGGCCGTGTCGCGGCCCCTTCCCGAGACCGGGCCGCCCCCAGCCAGAGCGTGCAGGATTGTGGGCAGGCGATcttcttt                                                                                 >  2:251174/1‑149 (MQ=255)
                                                                      tgtgGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCa                                                                                >  1:114043/1‑150 (MQ=255)
                                                                       gtgGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCaa                                                                               <  2:1670377/150‑1 (MQ=255)
                                                                           ggCCTTGTGTCGCGAAGGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCt                                                                           >  2:1222467/1‑150 (MQ=255)
                                                                           ggCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCt                                                                           >  2:1470059/1‑150 (MQ=255)
                                                                            gCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCacac                                                                                                                    <  2:2156917/108‑1 (MQ=255)
                                                                              cTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGc                                                                        <  2:1804909/150‑1 (MQ=255)
                                                                              cTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGc                                                                        >  1:1309958/1‑150 (MQ=255)
                                                                                 gtgtCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGcttc                                                                     <  1:2173686/150‑1 (MQ=255)
                                                                                   gtCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGcttctt                                                                   <  1:1222467/150‑1 (MQ=255)
                                                                                   gtCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGcttctt                                                                   <  1:2148891/150‑1 (MQ=255)
                                                                                   gtCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGcttctt                                                                   <  2:698585/150‑1 (MQ=255)
                                                                                    tCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAg                                                                                             <  1:628623/123‑1 (MQ=255)
                                                                                    tCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTg                                                                  >  2:2130322/1‑150 (MQ=255)
                                                                                     cgcgAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGa                                                                 <  1:262922/150‑1 (MQ=255)
                                                                                      gcgAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAg                                                                >  1:2089457/1‑150 (MQ=255)
                                                                                      gcgAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAg                                                                <  2:2024070/150‑1 (MQ=255)
                                                                                       cgAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGc                                                               <  1:1500944/150‑1 (MQ=255)
                                                                                            ggggCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTtc                                                          >  2:1373534/1‑150 (MQ=255)
                                                                                               gcgcAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTtcatc                                                       <  1:1545342/150‑1 (MQ=255)
                                                                                                  cAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACg                                                    >  2:806225/1‑150 (MQ=255)
                                                                                                   aaaGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCTCACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTATTGAGCTCTTCATCACGc                                                   <  2:1370724/150‑1 (MQ=255)
                                                                                                   aaaGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGc                                                   >  1:1569343/1‑150 (MQ=255)
                                                                                                   aaaGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAAGCCGAAACCACGCGGAGCGCGCAGGCCTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGc                                                   >  2:1775161/1‑150 (MQ=255)
                                                                                                           ccccAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTcgc                                            >  1:1578914/1‑150 (MQ=255)
                                                                                                            cccAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTcg                                                                                                                                          <  1:2180744/55‑1 (MQ=255)
                                                                                                            cccAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTcgcg                                           <  1:2440921/150‑1 (MQ=255)
                                                                                                            cccAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTcgcg                                           <  1:705737/150‑1 (MQ=255)
                                                                                                            cccAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTcgcg                                           <  1:2130322/150‑1 (MQ=255)
                                                                                                                gCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGtt                                               <  1:2319143/142‑1 (MQ=255)
                                                                                                                gCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCCTGCTTCTTGAGCTCTTCCTCCCGCACTTCGCCgcgc                                       >  2:1579446/1‑150 (MQ=255)
                                                                                                                 ccATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTCGCGGNGCa                                      <  2:1503435/150‑1 (MQ=255)
                                                                                                                      gATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTCGCGGCGCAGGATc                                 >  1:1957005/1‑150 (MQ=255)
                                                                                                                            tCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTCGCGGCGCAGGATCTTGccc                           <  2:2184245/150‑1 (MQ=255)
                                                                                                                                  ccgAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCACACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTCGCGGCGCAGGATCTTGCCCACGTtg                     <  2:1857121/150‑1 (MQ=255)
                                                                                                                                   cgAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTCGCGGCGCAGGATCTTGCCCACGTtgg                    <  2:1957005/150‑1 (MQ=255)
                                                                                                                                     aaaTCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTCGCGGCGCAGGATCTTGCCCACGTtggtg                  <  1:1322555/150‑1 (MQ=255)
                                                                                                                                       aTCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTCGCGGCGCAGGATCTTGCCCACGTTggtggt                >  2:2045460/1‑150 (MQ=255)
                                                                                                                                          ccAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTCGCGGCGCAGGATCTTGCCCACGTTTGTGGTCgg             >  2:1308970/1‑150 (MQ=255)
                                                                                                                                          ccAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTCGCGGCGCAGGATCTTGCCCACGTTGGTGGTCgg             >  1:1086849/1‑150 (MQ=255)
                                                                                                                                            aGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTCGCGGCGCAGGATCTTGCCCACGTTGGTGGTCGGCa           <  2:219270/150‑1 (MQ=255)
                                                                                                                                             gggCCGCGACGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTCGCGGCGCAGGATCTTGCCCACGTTGGTGGTCGGCAg          >  2:1219975/1‑150 (MQ=255)
                                                                                                                                              ggCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATcttctt                                                                                  >  2:365784/1‑77 (MQ=255)
                                                                                                                                              ggCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATcttctt                                                                                  <  1:365784/77‑1 (MQ=255)
                                                                                                                                               gCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTCGCGGCGCAGGATCTTGCCCACGTTGGTGGTCGGCAGCg        <  2:2370591/150‑1 (MQ=255)
                                                                                                                                                ccGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTCGCGGCGCAGGATCTTGCCCACGTTGGTGGTCGGCAGCGa       >  2:434091/1‑150 (MQ=255)
                                                                                                                                                   cgTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTCGCGGCGCAGGATCTTGCCCACGTTGGTGGTCGGCAGCGAATc    <  2:1695830/150‑1 (MQ=255)
                                                                                                                                                     tCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTCGCGGCGCAGGATCTTGCCCACGTTGGTGGTCGGCAGCGAATcgc  <  1:1008952/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
ATGCTTGAGAAGCTGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGCGCAAAGCGCCCCCAGCCATTGATGCATCGCCGCCGAAATCCCAGGGCCGCGTCGCGGCCCTTTCGCGACACGAGGCCGCCCCCACACTGAGCGTGCAGGCTTGTGGTCAGGCGATCTTCTTCAAGCCTTGCTTCTTGAGCTCTTCATCACGCAGTTCGCGGCGCAGGATCTTGCCCACGTTGGTGGTCGGCAGCGAATCGC  >  NC_002947/5171107‑5171404

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: