Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 432,022 C→T 5.4% E99K (GAG→AAG)  PP_0354 ← CBS domain‑containing protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947432,0220CT 5.4% 276.9 / 4.4 93E99K (GAG→AAG) PP_0354CBS domain‑containing protein
Reads supporting (aligned to +/- strand):  ref base C (45/43);  new base T (3/2);  total (48/45)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.73e-01

AGGGCAAAATCCCGAAACACATCAGACATCGAGAACACGCGGATGAATGCGGCCTTGTTCAGTTGCAGGCAGAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGATGTAGAAGTGCTCGACCGGCCCGTCGGCAGGTTTGACGATGCTTTCACCGCAGGCGTAGAAGCGC  >  NC_002947/431877‑432170
                                                                                                                                                 |                                                                                                                                                    
aGGGCAAAATCCCGAAACACATCAGACATCGAGAACACGCGGATGAATGCGGCCTTGTTCAGTTGCAGGCAGAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCg                                                                                                                                                  >  2:718442/1‑150 (MQ=255)
           ccGAAACACATCAGACATCGAGAACACGCGGATGAATGCGGCCTTGTTCAGTTGCAGGCAGAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGAtctc                                                                                                                                       <  1:1324668/150‑1 (MQ=255)
            cGAAACACATCAGACATCGAGAACACGCGGATGAATGCGGCCTTGTTCAGTTGCAGGCAGAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCg                                                                                                                                      >  2:196784/1‑150 (MQ=255)
                    aTCAGACATCGAGAACACGCGGATGAATGCGGCCTTGTTCAGTTGCAGGCAGAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGt                                                                                                                              >  1:1599350/1‑150 (MQ=255)
                    aTCAGACATCGAGAACACGCGGATGAATGCGGCCTTGTTCAGTTGCAGGCAGAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACATGGt                                                                                                                              <  2:1805390/150‑1 (MQ=255)
                     tCAGACATCGAGAACACGCGGATGAATGCGGCCTTGTTCAGTTGCAGGCAGAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGtt                                                                                                                             >  1:1064132/1‑150 (MQ=255)
                     tCAGACATCGAGAACACGCGGATGAATGCGGCCTTGTTCAGTTGCAGGCAGAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGtt                                                                                                                             <  2:719770/150‑1 (MQ=255)
                       aGACATCGAGAACACGCGGATGAATGCGGCCTTGTTCAGTTGCAGGCAGAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTc                                                                                                                           <  1:419936/150‑1 (MQ=255)
                         aCATCGAGAACACGCGGATGAATGCGGCCTTGTTCAGTTGCAGGCAGAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGa                                                                                                                         <  1:2240201/150‑1 (MQ=255)
                           aTCGAGAACAGGCGGTTCCCTGCGACCTTGCTCCGTTTCACGCGGAATGTGGCGTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTTCCAGCTGGAAGCCCTCCCCGCTGGTGATCTCGAACGTGGTTTCGaca                                                                                                                       <  2:260318/150‑1 (MQ=255)
                           aTCGAGAACACGCGGATGAATGCGGCCTTGTTCAGTTGCAGGCAGAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGGAGTGCTTCCCGCTggcagcc                                                                                                                                         <  2:1309726/132‑6 (MQ=255)
                           aTCGAGAACACGCGGATGAATGCGGCCTTGTTCAGTTGCAGGCAGAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGaca                                                                                                                       >  1:897079/1‑150 (MQ=255)
                           aTCGAGAACACGCGGATGAATGCGGCCTTGTTCAGTTGCAGGCAGAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGAGAGTGCTTCCCGCTggcagcc                                                                                                                                         >  1:1309726/1‑127 (MQ=255)
                              gagaACACGCGGATGAATGCGGCCTTGTTCAGTTGCAGGCAGAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACAccc                                                                                                                    <  1:1531637/150‑1 (MQ=255)
                              gagaACACGCGGATGAATGCGGCCTTGTTCAGTTGCAGGCAGAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACAccc                                                                                                                    <  2:2083892/150‑1 (MQ=255)
                              gagaACACGCGGATGAATGCGGCCTTGTTCAGTTGCAGGCAGAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCAACCAGCGGGATTAGCAGTGCGATGCACACCCCGCTAGGTAGCTCTAACGTGGTTTCGactaca                                                                                                                    >  2:23878/1‑146 (MQ=255)
                                         gATGAATGCGGCCTTGTTCAGTTGCAGGCAGAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAg                                                                                                         <  2:806289/150‑1 (MQ=255)
                                         gATGAATGCGGCCTTGTTCAGTTGCAGGCAGAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAg                                                                                                         <  2:1064132/150‑1 (MQ=255)
                                                gCGGCCTTGTTCAGTTGCAGGCAGAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGTGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTgg                                                                                                  <  1:846202/150‑1 (MQ=255)
                                                gCGGCCTTGTTCAGTTGCAGGCAGAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTgg                                                                                                  <  1:293471/150‑1 (MQ=255)
                                                  ggCCTTGTTCAGTTGCAGGCAGAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGgcg                                                                                                >  2:482767/1‑150 (MQ=255)
                                                  ggCCTTGTTCAGTTGCAGGCAGAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGgcg                                                                                                >  1:512450/1‑150 (MQ=255)
                                                   gCCTTGTTCAGTTGCAGGCAGAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGgcgc                                                                                               >  2:616924/1‑150 (MQ=255)
                                                    ccTTGTTCAGTTGCAGGCAGAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTg                                                                                                   <  1:699097/145‑1 (MQ=255)
                                                    ccTTGTTCAGTTGCAGGCAGAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTg                                                                                                   >  2:699097/1‑145 (MQ=255)
                                                        gTTCAGTTTCAGGCAGTAGGTGTGGTCCCCGGCCAGGTACTCGGCGCGGGTTGCCCGCTCACCGCGCAGGGCTGCCAGCGGGAAGGACTCCCCGCTGGGGATCTCGAACGTGGTTTCGACACCCTCTTAGGCCAGGTGATGGCGCTCggc                                                                                          >  2:634051/1‑148 (MQ=255)
                                                          tCAGTTGCAGGCAGAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCaa                                                                                        >  2:1757053/1‑150 (MQ=255)
                                                          tCAGTTGCAGGCAGAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCaa                                                                                        <  1:482767/150‑1 (MQ=255)
                                                              ttGCAGGCAGAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTg                                                                                                                                            <  2:269669/94‑1 (MQ=255)
                                                              ttGCAGGCAGAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTg                                                                                                                                            >  1:269669/1‑94 (MQ=255)
                                                              ttGCAGGCAGAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCAc                                                                                    <  1:1469148/150‑1 (MQ=255)
                                                                  aggcagAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCgg                                                                                >  2:2050838/1‑150 (MQ=255)
                                                                   ggcagAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGAAATGCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGc                                                                               <  1:23878/150‑1 (MQ=255)
                                                                    gcagAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGcc                                                                              >  2:601216/1‑150 (MQ=255)
                                                                    gcagAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGcc                                                                              >  2:1090544/1‑150 (MQ=255)
                                                                     cagAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGccc                                                                             >  2:2377961/1‑150 (MQ=255)
                                                                              tCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGGAGTGCTTCCCGCTgg                                                                                                                                              >  1:466819/1‑76 (MQ=37)
                                                                              tCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGGAGTGCTTCCCGCTgg                                                                                                                                              <  2:466819/76‑1 (MQ=37)
                                                                              tCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACg                                                                    >  1:186270/1‑150 (MQ=255)
                                                                               cTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGa                                                                   <  1:2029955/150‑1 (MQ=255)
                                                                                       gCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGAt                                                                  <  2:1763477/143‑1 (MQ=255)
                                                                                       gCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGAt                                                                  >  1:1763477/1‑143 (MQ=255)
                                                                                        ccAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAAACACGCGGCCCCGCTTGACGTTGTAGAAGt                                                          <  2:149615/150‑1 (MQ=255)
                                                                                              gCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGATGTAGaa                                                            >  2:1834697/1‑142 (MQ=255)
                                                                                              gCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGATGTAGaa                                                            <  1:1834697/142‑1 (MQ=255)
                                                                                               cTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGttt                                                                                                               >  1:1029174/1‑90 (MQ=255)
                                                                                               cTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGttt                                                                                                               <  2:1029174/90‑1 (MQ=255)
                                                                                               cTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGttt                                                                                                               <  2:1020543/90‑1 (MQ=255)
                                                                                               cTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGttt                                                                                                               >  1:1020543/1‑90 (MQ=255)
                                                                                               cTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGgcg                                                                                                >  1:2177650/1‑105 (MQ=255)
                                                                                               cTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGgcg                                                                                                <  2:2177650/105‑1 (MQ=255)
                                                                                               cTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCaa                                                                                        >  1:1658162/1‑113 (MQ=255)
                                                                                               cTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCaa                                                                                        <  2:1658162/113‑1 (MQ=255)
                                                                                                   gTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGATGTAGAAGTGCTCGACCGGc                                               <  1:196784/150‑1 (MQ=255)
                                                                                                     gCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGACGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGATGTAGAAGTGCTCGACCGGccc                                             <  1:501584/150‑1 (MQ=255)
                                                                                                     gCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGaca                                                                                                                       <  1:1971090/76‑1 (MQ=255)
                                                                                                     gCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGaca                                                                                                                       >  2:1971090/1‑76 (MQ=255)
                                                                                                        ggTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTTGCCAACCACGCGGCCCTGCTTGACGATGTAGAAGTGCTCGACCGGCCCGTc                                          <  1:61577/150‑1 (MQ=255)
                                                                                                        ggTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGATGTAGAAGTGCTCGACCGGc                                               <  1:925293/145‑1 (MQ=255)
                                                                                                        ggTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGATGTAGAAGTGCTCGACCGGc                                               >  2:925293/1‑145 (MQ=255)
                                                                                                             cccGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGATGTAGAAGTGCTCGACCGGCCCGTCGGCAg                                     <  1:1273434/150‑1 (MQ=255)
                                                                                                              ccGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCAcgc                                                                                  <  1:2309952/104‑1 (MQ=255)
                                                                                                              ccGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCAcgc                                                                                  >  2:2309952/1‑104 (MQ=255)
                                                                                                              ccGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGc                                                                               <  2:2403164/107‑1 (MQ=255)
                                                                                                              ccGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGc                                                                               >  1:2403164/1‑107 (MQ=255)
                                                                                                              ccGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGATGTAGAAGTGCTCGACCGGCCCGTCGGCAgg                                    >  2:18781/1‑150 (MQ=255)
                                                                                                              ccGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGATGTAGAAGTGCTCGACCGGCCCGTCGGCAgg                                    >  2:813959/1‑150 (MQ=255)
                                                                                                              ccGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGATGTAGAAGTGCTCGACCGGCCCGTCGGCAgg                                    >  1:321908/1‑150 (MQ=255)
                                                                                                               cGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGATGTAGAAGTGCTCGACCGGCCCGTCGGCAGGt                                   >  1:836672/1‑150 (MQ=255)
                                                                                                                gCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTg                                                                                                   <  1:380962/85‑1 (MQ=255)
                                                                                                                gCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTg                                                                                                   >  2:380962/1‑85 (MQ=255)
                                                                                                                    aCCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGATGTAGAAGTGCTCGACCGGCCCGTCGGCAGGTTTGAc                              >  2:819419/1‑150 (MQ=255)
                                                                                                                      ccAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGATGTAGAAGTGCTCGACCGGCCCGTCGGCAGGTTTGACGa                            >  2:690426/1‑150 (MQ=255)
                                                                                                                      ccAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGATGTAGAAGTGCTCGACCGGCCCGTCGGCAGGTTTGACGa                            >  1:1396291/1‑150 (MQ=255)
                                                                                                                       ctgcagGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGATGTAGAAGTGCTCGACCGGCCCGTCGGCAGGTTTGACGAt                           <  2:2087585/148‑1 (MQ=255)
                                                                                                                       cagcagGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGATGTAGAAGTGCTCGACCGGCCCGTCGGCAGGTTTGACGAt                           <  1:718442/150‑1 (MQ=255)
                                                                                                                              gCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGATGTAGAAGTGCTCGACCGGCTCGTCGGCAGGTTTGACGATGCTTTCa                    <  2:1599350/150‑1 (MQ=255)
                                                                                                                                  ccAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGATGTAGAAGTGCTCGACCGGCCCGTCGGCAGGTTTGACGATGCTTTCACCGc                >  2:892195/1‑150 (MQ=255)
                                                                                                                                  ccAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGATGTAGAAGTGCTCGACCGGCCCGTCGGCAGGTTTGACGATGCTTTCACCGc                >  1:548100/1‑150 (MQ=255)
                                                                                                                                   cAGCGGGGAGTGCTTCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGATGTAGAAGTGCTCGACCGGCCCGTCGGCAGGTTTGACGATGCTTTCACCGCa               >  1:932336/1‑150 (MQ=255)
                                                                                                                                   cAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGATGTAGAAGTGCTCGACCGGCCCGTCGGCAGGTTTGACGATGCTTTCACCGCa               <  2:548100/150‑1 (MQ=255)
                                                                                                                                   cAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGATGTAGAAGTGCTCGACCGGCCCGTCGGCAGGTTTGACGATGCTTTCACCGCa               <  1:616924/150‑1 (MQ=255)
                                                                                                                                    aGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGATGTAGAAGTGCTCGACCGGCCCGTCGGCAGGTTTGACGATGCTTTCACCGCAg              <  1:819419/150‑1 (MQ=255)
                                                                                                                                     gCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGATGTAGAAGTGCTCGACCGGCCCGTCGGCAGGTTTGACGATGCTTTCACCGCAgg             >  1:132327/1‑150 (MQ=255)
                                                                                                                                      cGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGATGTAGAAGTGCTCGACCGGCCCGTCGGCAGGTTTGACGATGCTTTCACCGCAGGc            <  1:335446/150‑1 (MQ=255)
                                                                                                                                        ggAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGATGTAGAAGTGCTCGACCGGc                                               <  2:535864/113‑1 (MQ=255)
                                                                                                                                        ggAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGATGTAGAAGTGCTCGACCGGc                                               >  1:535864/1‑113 (MQ=255)
                                                                                                                                        ggAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGATGTAGAAGTGCTCGACCGGCCCGTCGGCAGGTTTGACGATGCTTTCACCGCAGGCGt          >  1:2295545/1‑150 (MQ=255)
                                                                                                                                             tgcTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGa                                                                   <  1:75765/86‑1 (MQ=255)
                                                                                                                                             tgcTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGa                                                                   >  2:75765/3‑88 (MQ=255)
                                                                                                                                              aCTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGATGTAGAAGTGCTCGACCGGCCCGTCGGCAGGTTTGACGATGCTTTCACCGCAGGCGTAGAAgc    >  2:479039/1‑150 (MQ=255)
                                                                                                                                              aCTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGATGTAGAAGTGCTCGACCGGCCCGTCGGCAGGTTTGACGATGCTTTCACCGCAGGCGTAGAAgc    >  1:2110696/1‑150 (MQ=255)
                                                                                                                                                tCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGATGTAGAAGTGCTCGACCGGCCCGTCGGCAGGTTTGACGATGCTTTCACCGCAGGCGTAGAAgcgc  >  1:1171383/1‑150 (MQ=255)
                                                                                                                                                 |                                                                                                                                                    
AGGGCAAAATCCCGAAACACATCAGACATCGAGAACACGCGGATGAATGCGGCCTTGTTCAGTTGCAGGCAGAAGGTGTCTTCCCCGGCCAGGTGCTCGGTGCGGGTTGCCCGCTCACCCAGCAGGGCTGCCAGCGGGAAGCACTCCCCGCTGGTGATCTCGAACGTGGTTTCGACACCCGGTTTGGCCAGGTGCTGGCGCTCGCCAACCACGCGGCCCTGCTTGACGATGTAGAAGTGCTCGACCGGCCCGTCGGCAGGTTTGACGATGCTTTCACCGCAGGCGTAGAAGCGC  >  NC_002947/431877‑432170

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: