| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 445,098 | T→C | 6.3% | intergenic (+68/‑220) | PP_0367 → / → PP_0368 | hypothetical protein/acyl‑CoA dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 445,098 | 0 | T | C | 6.3% | 226.0 / 2.6 | 78 | intergenic (+68/‑220) | PP_0367/PP_0368 | hypothetical protein/acyl‑CoA dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (34/39); new base C (3/2); total (37/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.64e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.39e-01 | |||||||||||
CAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTT > NC_002947/444949‑445247 | cAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGAt > 2:2134690/1‑150 (MQ=255) ccgatcaaacagttgtttgaaacttacgtttagctcagctttctgtcaaggatggactatggtgccatttacgccacgaaaaatggcaaatcagtcatgccatgccacaaacCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATc > 1:1786030‑M1/113‑150 (MQ=255) aaGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGGCACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATc < 1:1823560/150‑1 (MQ=255) aGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCa < 2:1416338/150‑1 (MQ=255) cGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGaca > 2:2106247/1‑150 (MQ=255) aacagttgtttgaaacttacgtttagctcagctttctgtcaaggatggactatggtgccatttacgccacgaaaaatggcaaatcagtcatgccatgccacaaacCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGacaac < 2:2066372‑M1/45‑1 (MQ=255) tCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGACATAGCGGGCTTGCCCGCGAATGCGTCCGACCAGacaaaatt > 1:1204917/1‑146 (MQ=255) cGAGCTCGGCGCAAAGGTCGTCCAGGCATCCGACGAAATGCTTGGCCGGATCATCGACCCCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAAtt < 1:117774/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAAtt‑tt < 2:2272631/150‑1 (MQ=255) tttgaaacttacgtttagctcagctttctgtcaaggatggactatggtgccatttacgccacgaaaaatggcaaatcagtcatgccatgccacaaacCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGt > 1:2066372‑M1/98‑150 (MQ=255) tCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTc < 1:2246658/150‑1 (MQ=255) tCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTG‑TTGTc > 1:706098/1‑150 (MQ=37) tcAAAGGTCGTAAAGGAATCAGTCGAACTGTTTTGCCTGATCACCCGCTCCTACTCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTTCGACCAGACAA‑AATTGTTGTCTGATc < 2:1204917/149‑1 (MQ=19) gcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTc < 1:1360660/150‑1 (MQ=255) aaaGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCgg > 2:750179/1‑150 (MQ=255) aaaGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCgg > 1:1376274/1‑150 (MQ=255) aGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGc > 1:1555297/1‑150 (MQ=255) tcgtcAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGCCCGACCAGACAAAATTG‑TTGTCTga > 1:1792324/1‑140 (MQ=38) tcgtcAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGCCCGACCAGACAAAATTG‑TTGTCTga < 2:1792324/141‑2 (MQ=38) tcAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTc < 2:1920825/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCgg < 1:750179/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAAAT‑TTGTAGGGTGGGGATTCTTCGCgg > 2:1959672/1‑150 (MQ=255) cagctttctgtcaaggatggactatggtgccatttacgccacggctaaatataaatcactcatgccatgccacaaacCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCgg > 2:664355‑M1/78‑150 (MQ=255) cagctttctgtcaaggatggactatggtgccatttacgccacgaaaaatggcaaatcagtcatgccatgccacaaacCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCgg > 2:1701452‑M1/78‑150 (MQ=255) cgacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACATCAATT‑TTGGCGGGTCCGGCCTCTTCGCgggtaggt < 2:1273350/150‑6 (MQ=255) cgacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGc < 1:2026551/150‑1 (MQ=255) acgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGc > 2:256064/1‑148 (MQ=255) acgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGc < 1:256064/148‑1 (MQ=255) tcaaggatggactatggtgccatttacgccacgaaaaatggcaaatcagtcatgccatgccacaaacCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTc < 2:648840‑M1/59‑1 (MQ=255) tcaaggatggactatggtgccatttacgccacgaaaaatggcaaatcagtcatgccatgccacaaacCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTc > 1:648840‑M1/68‑126 (MQ=255) aTGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCTTGCCCGcgaa < 2:2253025/150‑4 (MQ=255) actagggtgccatttccgccaagaaaaagggcaactcagtcatgccatcccacaaccCCTTGTAGGAGCGGGCTGGCCCGCGAATGCGCCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAgg > 2:1781413‑M1/58‑150 (MQ=255) cGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAAAATTG‑TTGTCTGATCgga < 2:1467805/117‑2 (MQ=37) cGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAA‑AATTGTTGTCTGATCgga > 1:1467805/1‑116 (MQ=37) ggATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGtt > 2:896295/1‑150 (MQ=255) tcGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAg > 1:1250015/1‑140 (MQ=255) tcGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAg < 2:1250015/140‑1 (MQ=255) acacCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGtggcatg < 1:896295/150‑1 (MQ=255) acacCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGtggcatg < 1:1959672/150‑1 (MQ=255) acCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGTTCAGACAACAATT‑TTGTCTCTACCTGGCGTGGCGCGGGCAAGCCCGCTCCTACAAGGGTTTGtggcatggc < 1:2254507/150‑1 (MQ=255) cTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGa > 1:1176733/1‑82 (MQ=255) cTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGa < 2:1176733/82‑1 (MQ=255) cTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTggcatggcat > 1:2162242/1‑150 (MQ=255) tgCCTGAATACTTGCGTCCTCCCATATTTTGGCGCCGTCCTGGTAGCAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAc < 2:623437/149‑1 (MQ=38) gCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGtggcatggc > 1:133806/1‑144 (MQ=255) gCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGtggcatggc < 2:133806/144‑1 (MQ=255) gAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGtggcat > 2:1853428/1‑137 (MQ=255) gAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGtggcat < 1:1853428/137‑1 (MQ=255) aaatggcaaatcagtcatgccatgccacaaacCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCaa < 2:2054810‑M1/77‑1 (MQ=255) aaatggcaaatcagtcatgccatgccacaaacCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCaa > 1:2054810‑M1/33‑109 (MQ=255) tCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACt > 2:1854437/1‑132 (MQ=255) tCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACt < 1:1854437/132‑1 (MQ=255) cccTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTTGc > 1:2416417/1‑150 (MQ=255) cccTATTTCAGCGCCTGCATTGTAGGAGCGGGCTTGCCCGCGAATGGGTTCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCTTGGGATGACTGGTTTGCCATTTTTCGTGGc > 2:527940/1‑150 (MQ=38) ccTATTTCAGCGCCTGCCTTGTAGGAGCGGCCGCGCCCGCCAATGAGGTCGCTTGGTCTACCATT‑TTGTCTTGACGGGCCTCTTTACGGGCAACCCCCCTCCTTCAAGGGTTTTTGGGATCGCCTTTCTGATTTGCCAatttttttttcg > 2:1759525/1‑143 (MQ=255) gcgcCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCa > 1:2320393/1‑150 (MQ=255) gcgcCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCa < 2:2162242/150‑1 (MQ=255) cctgcctTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGtggcatg < 2:1695999/109‑1 (MQ=255) cctgcctTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGtggcatg > 1:1695999/1‑109 (MQ=255) tgcctTGTAGGAGCGGGCTTGCCCGCGACTGCGTCCGATCAGCCAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATa < 1:1620541/150‑1 (MQ=255) gcctTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATaa > 2:1981859/1‑149 (MQ=255) GGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTNTCTGNTCGGGCCTCTTc < 1:345457‑M1/62‑1 (MQ=255) GGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTc > 2:345457‑M1/1‑62 (MQ=255) GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACa < 2:2281003‑M1/150‑1 (MQ=255) GGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTGTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAg < 1:642903‑M1/150‑1 (MQ=255) TGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAg > 1:922021‑M1/1‑150 (MQ=255) CCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGc > 1:1360800‑M1/1‑55 (MQ=255) CCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGc < 2:1360800‑M1/55‑1 (MQ=255) CCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCCCCATAGTCCATCCTTGACAGAAAGCTg < 2:288261‑M1/150‑1 (MQ=255) CCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg < 1:1039513‑M1/150‑1 (MQ=255) CCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg < 2:1617182‑M1/150‑1 (MQ=255) CCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg < 1:2340438‑M1/150‑1 (MQ=255) CCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg < 1:448337‑M1/150‑1 (MQ=255) CCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCCTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGa > 2:2022639‑M1/1‑91 (MQ=255) CCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCCTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGa < 1:2022639‑M1/91‑1 (MQ=255) CGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGa > 1:1769468‑M1/1‑150 (MQ=255) GCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAg > 2:2340438‑M1/1‑150 (MQ=255) gCGTCGGCTCAGTCAACAATG‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGGTCCTGCACGGGTTTATGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAAc < 2:722388/150‑1 (MQ=255) gTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGt > 1:103352/1‑150 (MQ=255) tCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGttt > 1:1304398/1‑150 (MQ=255) tCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGttt > 1:772296/1‑150 (MQ=255) | CAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATT‑TTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTT > NC_002947/444949‑445247 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |