| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,378,308 | A→T | 6.0% | intergenic (‑37/‑156) | grpE ← / → recN | heat shock protein GrpE/DNA repair/recombination protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,378,308 | 0 | A | T | 6.0% | 359.9 / 10.0 | 117 | intergenic (‑37/‑156) | grpE/recN | heat shock protein GrpE/DNA repair/recombination protein |
| Reads supporting (aligned to +/- strand): ref base A (56/54); new base T (4/3); total (60/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.44e-01 | |||||||||||
Only 100 of 117 total aligned reads displayed.
CTTGGCTGCGGCCAGCTGTTCCTCGAGCTCCAGAACAC‑GGGTATCAGCTGCATTGCCTGCACCGGTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTGTATAAATAACCAGACCTGATTTCCGGGA > NC_002947/5378161‑5378454 | ttGGCTGCGGCCAGCTGTTCCTTGAGCTCCAGAACAC‑GGGTATCAGCTGCATTGCCTGCACCGGTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGc > 2:20362/1‑150 (MQ=255) cTGCGGCAAGCTGTTCCTCGAGCTCCAGAACAC‑GGGTATCAGCTGCATTGCCTGCACCGGTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCTGGCTCGc > 2:2434566/1‑150 (MQ=255) tGCGGCCAGCTGTTCCTCGAGCTCCAGAACAC‑GGGTATCAGCTGCATTGCCTGCACCGGTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGcc > 1:357356/1‑150 (MQ=255) tGCGGCCAGCTGTTCCTCGAGCTCCAGAACAC‑GGGTATCAGCTGCATTGCCTGCACCGGTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGcc < 2:244671/150‑1 (MQ=255) cGGCCAGCTGTTCCTCGAGCTCCAGAACAC‑GGGTATCAGCTGCATTGCCTGCACCGGTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCTGGCTCGcagt < 1:2434566/150‑4 (MQ=255) gCCAGCTGTTCCTCGAGCTCCAGAACAC‑GGGTATCAGCTGCATTGCCTGCACCGGTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTgg < 1:1828442/150‑1 (MQ=255) ccAGCTGTTCCTCGAGCTCCAG‑ACACAGGGTATCTGCTGCATGGCCGTCACCGGTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGa < 1:1738653/150‑1 (MQ=255) cAGCTGTTCCTCGAGCTCCAGAACAC‑GGGTATCAGCTGCATTGCCTGCACCGGTTTCTTCCACGTAAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGACTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGAt > 1:633011/1‑150 (MQ=255) cTGTTCCTCGAGCTCCAGAACAC‑GGGTATCAGCTGCATTGCCTGCACCGGTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTc > 2:906500/1‑150 (MQ=255) gTTCCTCGAGCTCCAGAACAC‑GGGTATCAGCTGCATTGCCTGCACCGGTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCgg > 2:219696/1‑150 (MQ=255) gTTCCTCGAGCTCCAGAACAC‑GGGTATCAGCTGCATTGCCTGCACCGGTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCgg < 1:1124266/150‑1 (MQ=255) cTCGAGCTCCAGAACAC‑GGGTATCAGCTGCATTGCCTGCACCGGTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCtat > 2:2072534/1‑150 (MQ=255) tCGAGCTCCAGAACAC‑GGGTATCAGCTGCATTGCCTGCACCGGTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCTGGCTCGcagtcca < 2:239269/139‑7 (MQ=255) tCGAGCTCCAGAACAC‑GGGTATCAGCTGCATTGCCTGCACCGGTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCTGGCTCGcagtcca > 1:239269/1‑133 (MQ=255) tCGAGCTCCAGAACAC‑GGGTATCAGCTGCATTGCCTGCACCGGTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCTGGCTCGcagtcc < 2:2103472/138‑6 (MQ=255) aGCTCCAGAACAC‑GGGTATCAGCTGCATTGCCTGCACCGGTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGTGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATgg < 1:154339/150‑1 (MQ=255) cTCCAGAACAC‑GGGTATCAGCTGCATTGCCTGCACCGGTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATgggg < 2:357356/150‑1 (MQ=255) cAGAACAC‑GGGTATCAGCTGCATTGCCTGCACCGGTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGAAATTTTTTGGACTGCGAGTCACGCTCGCCTTGGATGTCGGCTATATGGGGCCg > 2:1245321/1‑150 (MQ=255) gggTATCAGCTGCATTGCCTGCACCGGTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAAcc > 1:800362/1‑150 (MQ=255) aTCAGCTGCATTGCCTGCACCGGTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGt < 2:2336891/150‑1 (MQ=255) cTGCATTGCCTGCACCGGTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAg < 1:518833/150‑1 (MQ=255) cTGCATTGCCTGCACCGGTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAg > 2:518833/1‑150 (MQ=255) gCATTGCCTGCACCGGTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGGTCAAggg > 1:1605690/1‑150 (MQ=255) ttGCCTGCACCGGTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCgg < 2:2360239/115‑1 (MQ=255) ttGCCTGCACCGGTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCgg > 1:2360239/1‑115 (MQ=255) ttGCCTGCACCGGTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCa > 1:292495/1‑150 (MQ=255) ttGCCTGCACCGGTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCa > 1:1446291/1‑150 (MQ=255) gCACCGGTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAg < 1:2086263/150‑1 (MQ=255) gCACCGGTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAg < 1:996258/150‑1 (MQ=255) aCCGGTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGtt < 1:20362/150‑1 (MQ=255) aCCGGTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGtt > 1:1065885/1‑150 (MQ=255) aCCGGTTTCTTCCACGTTAAGGTCTTTCTCGTTAAGCTGTTCATCAGCAATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGTTCGCCTTGGATGTCGGAAAAAAAAAAAAAAAAAAACCAGGTTCAAGGGGCAAGGTAGtt < 2:840766/150‑1 (MQ=255) cGGTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGtttt > 1:2240052/1‑150 (MQ=255) gTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAg > 1:453068/1‑133 (MQ=255) gTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAg < 2:453068/133‑1 (MQ=255) ttcttcCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAg > 1:858516/1‑150 (MQ=255) ttcCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACt > 2:1538831/1‑150 (MQ=255) ttcCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACt > 1:2286003/1‑150 (MQ=255) ttcCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGCCTCTCTCTTGCGCAATTTTGTGGACTGTGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACt > 1:1227022/1‑150 (MQ=255) tcCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTg > 1:2030893/1‑150 (MQ=255) ccACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGc < 2:292495/150‑1 (MQ=255) aCGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGTGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCaa < 2:633011/150‑1 (MQ=255) aCGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCaa < 2:2012267/150‑1 (MQ=255) ggTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCACGACTGCAACATAATc > 1:812338/1‑150 (MQ=255) tttCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCg > 2:567392/1‑150 (MQ=255) tttCTCGTTCAGATGCTCATCCGTCACAGGATTTCTGATGCGCAATTTTGTGGACTTCGAGCCAGGCTCGCCTTGGATGTCGGCTACATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGGAGTATTTAAGACTGCAACATAATCTGCg > 2:1207313/1‑150 (MQ=255) tcGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGc > 1:1943589/1‑145 (MQ=255) tggacAGCTGCTCATCAGCCATGGGGTCTCGCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAggg > 2:955419/5‑150 (MQ=255) gTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGaaaaa < 1:1148814/96‑1 (MQ=255) gTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGaaaaa > 2:1148814/1‑96 (MQ=255) gTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGc > 1:1156619/1‑111 (MQ=255) gTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGc < 2:1156619/111‑1 (MQ=255) aGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGaaaa > 1:795067/1‑91 (MQ=255) gctgctCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTg > 2:620625/1‑150 (MQ=255) tgctCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCaa < 1:1746467/106‑1 (MQ=255) tgctCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCaa > 2:1746467/1‑106 (MQ=255) tgctCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGc < 1:2072534/150‑1 (MQ=255) gctCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCa < 2:800362/150‑1 (MQ=255) ctCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAg < 1:1245321/150‑1 (MQ=255) tcatcaGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAgg > 2:2384315/1‑150 (MQ=255) atcaGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAggg < 2:1652607/97‑1 (MQ=255) atcaGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGcc > 1:1430727/1‑150 (MQ=255) tcaGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGGCGGAAAAACCAGGTTCAAGGGGCGAGGTAGTTTTCAAGACTGCAAAATAATTGGTTAGCGGGGATTGGCAGGCCt > 2:1133150/1‑150 (MQ=255) tcaGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCa < 2:1254696/86‑1 (MQ=255) tcaGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCt > 1:1069724/1‑150 (MQ=255) tcaGCCATGGGGTCTCTCCTGCGCAACTTTGTGGACTGCGAGCCAGGCTCGAATTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCt < 1:1206593/150‑1 (MQ=255) aGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGcc > 1:1952074/1‑51 (MQ=255) aGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGcc < 2:1952074/51‑1 (MQ=255) aGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGttt > 2:2289018/1‑106 (MQ=255) aGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGttt < 1:2289018/106‑1 (MQ=255) cATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCaa < 1:1752847/88‑1 (MQ=255) cATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCaa > 2:1752847/1‑88 (MQ=255) tGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGaaaaaa < 1:906500/150‑1 (MQ=255) tGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGaaaaaa < 2:1430727/150‑1 (MQ=255) gggTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGt > 1:432337/1‑150 (MQ=255) ggTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTa < 2:1065885/150‑1 (MQ=255) tctctcCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTTGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAggg > 2:267719/1‑124 (MQ=255) tctctcCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACt < 1:50218/150‑1 (MQ=255) tctcCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTGt < 1:1672286/150‑1 (MQ=255) tctcCTGCGCAATTTTGTGGACTGCAACCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTGt < 1:367899/150‑1 (MQ=255) tGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCaa > 1:1008301/1‑93 (MQ=255) tGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCaa < 2:1008301/93‑1 (MQ=255) gcAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGa > 2:1693641/1‑92 (MQ=255) gcAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGa < 1:1693641/92‑1 (MQ=255) gcAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTGTataaataa < 1:1056986/150‑1 (MQ=255) gcAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATAGGGCCTGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTGTataaataa > 1:1005414/1‑150 (MQ=255) aaTTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTGTATAAATAAcc > 2:2349338/1‑150 (MQ=255) tttGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTGTATAAATAACCAGa < 2:1069724/150‑1 (MQ=255) tgGACTGCGAGCCAGGCTCGCCTTGGCTGTCGGCTATATGGGGCCGGAAAAACCAATTCCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTGTATAAATAACCAGACCTg < 1:1207313/150‑1 (MQ=255) aggCGAGCCTGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTGTATAAATAACCAGACCTGAttt > 2:1886514/3‑150 (MQ=255) tGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAg < 2:1923134/51‑1 (MQ=255) tGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGCGAAGTGTACTGTATAAATAACCAGACCTGATTTc > 2:788846/1‑150 (MQ=255) tGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTGtat > 1:794854/1‑130 (MQ=255) tGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTGtat < 2:794854/130‑1 (MQ=255) tGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTGTATAAATAACCAGAc > 2:1498323/1‑142 (MQ=255) tGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTGTATAAATAACCAGACCTGATTTc > 2:1704766/1‑150 (MQ=255) ggCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTGTATAAATAACCAGAc < 1:1498323/141‑1 (MQ=255) cGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTGTATAAATAACCAGACCt > 2:994442/1‑142 (MQ=255) cGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTGTATAAATAACCAGACCt < 1:994442/142‑1 (MQ=255) gAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTGTATAAATAACCAGACCTGATTTCCgg < 1:1538831/150‑1 (MQ=255) | CTTGGCTGCGGCCAGCTGTTCCTCGAGCTCCAGAACAC‑GGGTATCAGCTGCATTGCCTGCACCGGTTTCTTCCACGTTAAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCTGCGCAATTTTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTGTATAAATAACCAGACCTGATTTCCGGGA > NC_002947/5378161‑5378454 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |