| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,398,502 | G→T | 5.3% | G489V (GGA→GTA) | hsdS → | type I restriction modification system specificity protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,398,502 | 0 | G | T | 5.3% | 236.1 / 2.5 | 76 | G489V (GGA→GTA) | hsdS | type I restriction modification system specificity protein |
| Reads supporting (aligned to +/- strand): ref base G (31/40); new base T (2/2); total (34/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.48e-01 | |||||||||||
CAGAGACTAAGGTCGGTGATATACTATTCACTCGGGCTGGCCCTATGAACCGCGTGGGAATTTCTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGTCAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTTAGCACCGCTCCGCGAGCAACACC > NC_002947/5398355‑5398651 | cAGAGACTAAGGTCGGTGATATACTATTCACTCGGGCTGGCCCTATGAACCGCGTGGGAATTTCTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCTGTTTTCATCCTGTTGAGCTGGGTGTTTATGGaa < 1:461002/150‑1 (MQ=255) agagACTAAGGTCGGTGATATACTATTCACTCGGGCTGGCCCTATGAACCGCGTGGGAATTTCTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAg < 2:692506/150‑1 (MQ=255) agaCTAAGGTCGGTGATATACTATTCACTCGGGCTGGCCCTATGAACCGCGTGGGAATTTCTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGt > 1:348003/1‑150 (MQ=255) gaCTAAGGTCGGTGATATACTATTCACTCGGGCTGGCCCTATGAACCGCGTGGGAATTTCTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGtt > 1:912768/1‑150 (MQ=255) tAAGGTCGGTGATATACTATTCACTCGGGCTGGCCCTATGAACCGCGTGGGAATTTCTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGt < 2:1953130/150‑1 (MQ=255) gTCGGTGATATACTATTCACTCGGGCTGGCCCTATGAACCGCGTGGGAATTTCTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGct > 2:1650365/1‑150 (MQ=255) tCGGTGATATACTATTCACTCGGGCTGGCCCTATGAACCGCGTGGGAATTTCTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGctc < 2:1489376/150‑1 (MQ=255) tataCTATTCACTCGGGCTGGCCCTATGAACCGCGTGGGAATTTCTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCtt < 2:352909/150‑1 (MQ=255) tataCTATTCACTCGGGCTGGCCCTATGAACCGCGTGGGAATTTCTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCtt < 1:1974386/150‑1 (MQ=255) ataCTATTCACTCGGGCTGGCCCTATGAACCGCGTGGGAATTTCTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGctct < 1:2243228/143‑1 (MQ=255) ataCTATTCACTCGGGCTGGCCCTATGAACCGCGTGGGAATTTCTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGctct > 2:2243228/1‑143 (MQ=255) taCTATTCACTCGGGCTGGCCCTATGAACCGCGTGGGAATTTCTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGa < 2:2316970/150‑1 (MQ=255) aTTCACTCGGGCTGGCCCTATGAACCGCGTGGGAATTTCTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGc > 2:2263691/1‑150 (MQ=255) tCACTCGGGCTGGCCCTATGAACCGCGTGGGAATTTCTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTg < 2:1436841/150‑1 (MQ=255) cACTCGGGCTGGCCCTATGAACCGCGTGGGAATTTCTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTgg < 1:1965935/150‑1 (MQ=255) aCTCGGGCTGGCCCTATGAACCGCGTGGGAATTTCTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGga > 2:1911019/1‑150 (MQ=255) aCTCGGGCTGGCCCTATGAACCGCGTGGGAATTTCTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGga < 2:1974823/150‑1 (MQ=255) tCGGGCTGGCCCTATGAACCGCGTGGGAATTTCTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGgaga > 1:650846/1‑150 (MQ=255) ggCTGGCCCTATGAACCGCGTGGGAATTTCTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAAc < 2:348003/150‑1 (MQ=255) ccTATGAACCGCGTGGGAATTTCTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCaaa > 1:1172468/1‑150 (MQ=255) tGAACCGCGTGGGAATTTCTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATAtc < 2:650846/150‑1 (MQ=255) gAACCGCGTGGGAATTTCTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGAGCATATGCAAGGGTTTTCGCTCTCGGCTTGAACGCTGGAGAAACTGCCAAATAtct > 2:62686/1‑150 (MQ=255) gAACAGCGTGGGAATTTCTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGCGAAACTGCCAAATAtct > 2:286521/1‑150 (MQ=255) aaCCGCGTGGGAATTTCTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATAtctc < 2:1036103/150‑1 (MQ=255) aaCCGCGTGGGAATTTCTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATAtctc < 1:1655940/150‑1 (MQ=255) aaCCGCGTGGGAATTTCTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATAtctc < 2:860814/150‑1 (MQ=255) aCCGCGTGGGAATTTCTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCg > 2:2392119/1‑150 (MQ=255) gTGGGAATTTCTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAg < 1:2224880/150‑1 (MQ=255) gTGGGAATTTCTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAg < 2:1765817/150‑1 (MQ=255) tGGGAATTTCTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAgg < 1:1911019/150‑1 (MQ=255) gggAATTTCTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGc > 2:125346/1‑150 (MQ=255) ggAATTTCTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGcc < 1:2263691/150‑1 (MQ=255) cTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTACGGAAGGTATGTCGCTCTTTGCTCGAACGCTGGAGAAACTTCGAAATGTCTCGAACAGGCCAAGTCCg < 2:868372/150‑1 (MQ=255) gCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCa > 1:752309/1‑150 (MQ=255) tCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGaaa > 2:234018/1‑114 (MQ=255) tCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGaaa < 1:234018/114‑1 (MQ=255) tCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATgg < 1:2392119/150‑1 (MQ=255) gTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCttt > 1:1610845/1‑94 (MQ=255) gTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCttt < 2:1610845/94‑1 (MQ=255) gTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATggtt < 2:1172468/150‑3 (MQ=255) aaaGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCaa < 2:1164417/150‑1 (MQ=255) aGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGt < 1:125346/150‑1 (MQ=255) ccGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGATCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGTCAat > 1:416332/1‑150 (MQ=255) ccGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCCAGACCCGCATGGCTGCAAGTCAGGTCAat > 2:1135590/1‑150 (MQ=255) ccGAAATTAATGACTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGTCAat < 2:551215/150‑1 (MQ=255) cGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGTCAata > 1:39817/1‑150 (MQ=255) tAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCttt < 1:1510231/72‑1 (MQ=255) tAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCttt > 2:1510231/1‑72 (MQ=255) aTGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGTCAATATCTCGCaa > 1:1640482/1‑150 (MQ=255) tCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGTCAATATCTCGCAAGAAAAg > 1:2175205/1‑150 (MQ=255) aCAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGTCAATATCTCGCAAGAAAAGCTga < 2:2175205/150‑1 (MQ=255) aCAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGTCAATATCTCGCAAGAAAAGCTga < 2:883517/150‑1 (MQ=255) aCAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCGCTTTGCTTGAACGCTGGAGAAACTGCCAAATAGCTCGACTAGGCCAAGTCCGGCATGGCTGCAAGTCAGGTCAATATCTCGCAAGAAAAGCTga < 2:912768/150‑1 (MQ=255) gATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGTCAATATCTCGCAAGAAAAGCTGAGAtt > 2:1005551/1‑150 (MQ=255) catcaGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCaa > 2:1044075/1‑113 (MQ=255) catcaGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCaa < 1:1044075/113‑1 (MQ=255) catcaGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGTCAATATCTCGCAAGAAAAGCTGAGATTGGc > 1:1164305/1‑150 (MQ=255) catcaGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGTCAATATCTCGCAAGAAAAGCTGAGATTGGc > 1:2435399/1‑150 (MQ=255) caGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAata > 2:2296154/1‑78 (MQ=255) caGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAata < 1:2296154/78‑1 (MQ=255) tttCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGTCAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATc < 2:609325/150‑1 (MQ=255) tttCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGTCAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATc > 1:1258313/1‑150 (MQ=255) tttCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGTCAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATc > 2:878189/1‑150 (MQ=255) tCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCt > 2:333359/1‑97 (MQ=255) tCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCt < 1:333359/97‑1 (MQ=255) tCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGTCAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGtt < 1:2080682/150‑1 (MQ=255) tGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGc > 1:677278/1‑96 (MQ=255) tGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGc < 2:677278/96‑1 (MQ=255) gTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGTCAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTTAGCa > 1:2095868/1‑150 (MQ=255) gAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGgaga > 1:1599303/1‑50 (MQ=255) gAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGgaga < 2:1599303/50‑1 (MQ=255) gtTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGTCAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTTAGCACCGCTCCGCGAg < 1:1717674/150‑1 (MQ=255) tATGTAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTc < 2:1600087/85‑1 (MQ=255) tATGTAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTc > 1:1600087/1‑85 (MQ=255) tATGTAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTc > 1:1600093/1‑85 (MQ=255) tATGTAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTc < 2:1600093/85‑1 (MQ=255) ggAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGTCAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTTAGCACCGCTCCGCGAGCAacac > 1:847173/1‑150 (MQ=255) gAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGTCAATATCTCGCAAGAAAAGGTGAGATTGGCTCCGATCCCGTTAGCACCGCTCCGCGAGCAACAcc > 2:438658/1‑150 (MQ=255) gAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGTCAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTTAGCACCGCTCCGCGAGCAACAcc > 1:774930/1‑150 (MQ=255) | CAGAGACTAAGGTCGGTGATATACTATTCACTCGGGCTGGCCCTATGAACCGCGTGGGAATTTCTTGCCTCGTTGAAAGTACGCGCCCGAAATTAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGTCAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTTAGCACCGCTCCGCGAGCAACACC > NC_002947/5398355‑5398651 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |