| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,415,792 | T→C | 6.4% | A11A (GCA→GCG) ‡ | gabP‑V ← | gamma‑aminobutyrate permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,415,792 | 0 | T | C | 6.4% | 233.0 / 4.1 | 78 | A11A (GCA→GCG) ‡ | gabP‑V | gamma‑aminobutyrate permease |
| Reads supporting (aligned to +/- strand): ref base T (31/42); new base C (2/3); total (33/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.09e-01 | |||||||||||
ACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAGGCGAAAAATATCTCCTTTGAAATCAATAAGTCGACACGTTGTTCGCGCGCTGTTGTTGATATTTGGC > NC_002947/5415643‑5415939 | aCCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTtgt < 1:1364541/150‑1 (MQ=255)aCCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTtgt < 2:524940/150‑1 (MQ=255) gTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCaa < 2:25587/150‑1 (MQ=255) gTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCaa > 2:2123698/1‑150 (MQ=255) tACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAg < 2:680457/150‑1 (MQ=255) accaccAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAgg < 1:472799/150‑1 (MQ=255) caccaGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGACACCTTGTGCAAGGtt > 2:828097/1‑150 (MQ=255) caGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGcc < 2:527086/150‑1 (MQ=255) aGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGCACAAGGtttcaa < 1:1719847/150‑5 (MQ=255) ggTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATc < 1:941209/150‑1 (MQ=255) gTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCa < 2:1751091/150‑1 (MQ=255) gTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCa < 2:198499/150‑1 (MQ=255) aCCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGa < 2:2146109/150‑1 (MQ=255) gAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGgt > 1:358558/1‑150 (MQ=255) aaaTAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGgtg < 1:2305408/150‑1 (MQ=255) tAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATTGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTc > 2:1278617/1‑150 (MQ=255) ggAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCAt > 2:80624/1‑150 (MQ=255) gAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGCTGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCACGGTTCCCATCAGATCCCCCCGTGTTCAtt > 2:915763/1‑150 (MQ=255) aTTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAAACGTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGAt > 1:1591347/1‑150 (MQ=255) ttATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAGCCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGAtg < 2:2179862/150‑1 (MQ=255) ttATGGTTGCTGGGCCGGATGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACTTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGAtg < 2:532354/150‑1 (MQ=255) gTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGAAGCCTAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATgttgtt < 1:511959/150‑1 (MQ=255) ggCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATc > 2:1019706/1‑115 (MQ=255) ggCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATc < 1:1019706/115‑1 (MQ=255) ggCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCtttt > 1:1129627/1‑150 (MQ=255) ccGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCAtt < 2:527035/132‑1 (MQ=255) ccGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCAtt > 1:527035/1‑132 (MQ=255) ccGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTg > 1:1531735/1‑150 (MQ=255) cGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGc < 1:985575/150‑1 (MQ=255) ggCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCt < 2:1805741/150‑1 (MQ=255) cTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGa < 1:80624/150‑1 (MQ=255) cTGCCGCGATGGCATGGCCAGAGCCGACCAAAAGCCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGa < 1:2302859/150‑1 (MQ=255) cgcgATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCttttt < 2:454310/141‑1 (MQ=255) cgcgATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCttttt > 1:454310/1‑141 (MQ=255) gcgATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCttttt < 1:1471425/140‑1 (MQ=255) gcgATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCttttt > 2:1471425/1‑140 (MQ=255) gcgATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACaa < 2:732628/150‑1 (MQ=255) gcgATGGCATGGCCAGAGCCGACGAAAAGTCCGGCG‑CATTGTTGGCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACaa < 1:1205136/150‑1 (MQ=255) tggcatggcCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCATGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACaaggaa < 1:420450/150‑1 (MQ=255) gggcatggcCAGAGCCGACGAAAAGTACGGCGCCGCTGCT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACaaggaa < 2:1591347/149‑1 (MQ=255) atggcCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGAc < 1:1609051/150‑1 (MQ=255) atggcCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGAc > 2:1679046/1‑150 (MQ=255) atggcCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGCACAAGGtttca < 1:1022303/93‑4 (MQ=39) atggcCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGCACAAGGtttca > 2:1022303/1‑90 (MQ=255) cAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAAGCTTGTGCAAGGTTGCCATCAGATCGCACGGTGTTCATTGATGTTGTTCTCTTTTCAATGCTACACGGAACGACGGGCa > 2:733694/1‑150 (MQ=255) agagCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAGACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAg < 1:828097/150‑1 (MQ=255) agagCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTTCTGACACAAGGAAGGACGGGCAg < 2:1697585/150‑1 (MQ=255) gagCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAgg < 1:473477/150‑1 (MQ=255) gacgaAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAg < 2:295163/150‑1 (MQ=255) acgaAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAgg > 1:2128609/1‑150 (MQ=255) gaAAAGTCCGGCGCCGATGAT‑GCCGGCGATTGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAGGTACGGGCAGGCGTAGGCg > 1:120794/1‑150 (MQ=255) gaAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACATTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGa < 1:560333/122‑1 (MQ=255) gaAAAGTACGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACATTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGa > 2:560333/1‑122 (MQ=255) gTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAGGCGaaaaa > 2:2023184/1‑150 (MQ=255) gcgcCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCTCACGGTGTTCCTTGATGTTGGTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAGGCGAAAAATAtct < 1:2123698/150‑1 (MQ=255) gcCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAGGCGAAAAATATCTcc < 1:856857/150‑1 (MQ=255) atgat‑gCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAGGCGAAAAATATCTCCTTTg < 2:1475221/150‑1 (MQ=255) at‑gCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAGGCGAAAAATATCTCCTTTGaaa < 2:1531735/150‑1 (MQ=255) ggCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAGGCGAAAAATATCTCCTTTGAAATCAAt > 2:364196/1‑150 (MQ=255) ggCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAGGCGAAAAATATCTCCTTTGAAATCAAt < 1:1888959/150‑1 (MQ=255) ggACAGCATCGTTACGTGACGTGGCGTGAAACCTGGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAGGCGAAAAATATCTCCTTTGAAATCAATAAGTCg > 2:1969933/1‑150 (MQ=255) gACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGAtg > 2:2409911/1‑73 (MQ=255) gACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGAtg < 1:2409911/73‑1 (MQ=255) gACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAGGCGAAAAATATCTCCTTTGAAATCAATAAGTCGa < 2:120794/150‑1 (MQ=255) aGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAGGCGAAAAATATCTCCTTTGAAATCAATAAGTCGacac > 1:667076/1‑150 (MQ=255) cATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAGGCGAAAAat < 1:390256/120‑1 (MQ=255) cATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAGGCGAAAAat > 2:390256/1‑120 (MQ=255) aTCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAGGCGAAAAATATCTCCTTTGAAATCAATAAGTCGACACgtt > 2:698649/1‑150 (MQ=255) ttACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAGGCGAAAAATATCTCCTTTGAAATCAATAAGTCGACACGTTGTTc < 2:1129627/150‑1 (MQ=255) tgatggcaaCCTTGCACAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAGGCGAAAAATATCTCCTTTGAAATCAATAAGTCGACACGTTGTTCGCGCGCtgttg > 2:425358/8‑150 (MQ=255) cTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAGGCGAAAAATATCTCCTTTGAAATCAATAAGTCGACACGTTGTTCGCGCGCTgttgtt < 1:2119893/150‑1 (MQ=255) atggcaaCCTTGCACAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAGGCGAAAAATATCTCCTTTGAAATCAATAAGTCGACACGTTGTTCGCGCGCTgttgtt < 1:425358/145‑1 (MQ=255) ttGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAGGCGAAAAATATCTCCTTTGAAATCAATAAGTCGACACGTTGTTCGCGCGCTGttgttg > 1:221540/1‑150 (MQ=255) ttGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAGGCGAAAAATATCTCCTTTGAAATCAATAAGTCGACACGTTGTTCGCGCGCTGttgttg > 2:1701213/1‑150 (MQ=255) aaaCCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAGGCGAAAAATATCTCCTTTGAAATCAATAAGTCGACACGTTGTTCGCGCGCTGTTGTTGata > 2:327771/1‑150 (MQ=255) aaCCTTGTGCAAGGTTGCCATAAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAGGCGAAAAATATCTCCTTTGAAATCAATAAGTCGaca > 1:2286153/1‑124 (MQ=255) aaCCTTGTGCAAGGTTGCCATAAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAGGCGAAAAATATCTCCTTTGAAATCAATAAGTCGaca < 2:2286153/124‑1 (MQ=255) aCCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAGGCGAAAAATATCTCCTTTGAAATCAATAAGTCGACACGTTGTTCGCGCGCTgttgtt > 1:2132694/1‑144 (MQ=255) aCCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAGGCGAAAAATATCTCCTTTGAAATCAATAAGTCGACACGTTGTTCGCGCGCTgttgtt < 2:2132694/144‑1 (MQ=255) ccTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAGGCGAAAAATATCTCCTTTGAAATCAATAAGTCGACACGTTGTTCGCGCGCTGTTGTTGATAttt > 2:1859786/1‑150 (MQ=255) tgtgCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTACTAACAGAAGGAAGGACGGGCAGGCGTAGGCGAAAAATATCTCCTTTGAAATCAATAAGTCGACACGTTGTTCGCCCGCTGTTGTTGATATTTGGc < 1:1207198/150‑1 (MQ=255) | ACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGAT‑GCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAGGCGAAAAATATCTCCTTTGAAATCAATAAGTCGACACGTTGTTCGCGCGCTGTTGTTGATATTTGGC > NC_002947/5415643‑5415939 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |