Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 5,427,963 | A→T | 8.5% | L63Q (CTG→CAG) | rhlE‑I ← | ATP‑dependent RNA helicase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 5,427,963 | 0 | A | T | 8.5% | 415.7 / 22.0 | 138 | L63Q (CTG→CAG) | rhlE‑I | ATP‑dependent RNA helicase |
Reads supporting (aligned to +/- strand): ref base A (67/59); new base T (6/6); total (73/65) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01 |
Only 100 of 139 total aligned reads displayed.
TGACCCCGCCATACACCGCGTAAGTAGTCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACCGGGGTCGGGGTGGTGTAGTCCAGTTGCTGCAGCGTGCG > NC_002947/5427814‑5428111 | tGACCCCGCCATACACCGCGTAAGTAGTCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCa > 2:823188/1‑150 (MQ=255) cccGCCATACACCGCGTAAGTAGTCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGgcg > 2:1575447/1‑150 (MQ=255) ccGCCATACACCGCGTAAGTAGTCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCTGgcgc > 2:1874335/1‑150 (MQ=255) cGCCATACACCGCGTAAGTAGTCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCt > 1:1611687/1‑150 (MQ=255) ccATACACCGCGTAAGTAGTCAGCGGCAGGTTCTCGGCGTATTCGCGCAAGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTgc < 1:127403/150‑1 (MQ=255) tACACCGCGTAAGTAGTCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCTGGCGCTggagg < 1:1874335/150‑2 (MQ=255) acCGCGTAAGTAGTCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGcaca > 1:2382232/1‑150 (MQ=255) acCGCGTAAGTAGTCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGcaca > 1:714667/1‑150 (MQ=255) ccGCGTAAGTAGTCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCAcag > 2:1705117/1‑150 (MQ=255) cgcgTAAGTAGTCAGCGGCAGGTTCTCGGCGTATTCGCGCATGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCAcagg < 1:1711883/150‑1 (MQ=255) cgcgTAAGTAGTCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCAcagg > 2:1585350/1‑150 (MQ=255) gcgTAAGTAGTCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGAGCGGCAGCCcaggc > 1:174352/1‑150 (MQ=255) aaGTAGTCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAggg < 2:429133/150‑1 (MQ=255) agtCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCaaa < 2:714667/150‑1 (MQ=255) gtCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAg < 1:1792296/150‑1 (MQ=255) tCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCCGCACCATGTCGCGGATCGAGTTGCTGACCAATTTAAAACTCTCTAGGGCCAGGCGCTGCAGCACAGGCAGGGCAAAGc > 1:1740166/1‑150 (MQ=255) tCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGc > 1:2442458/1‑150 (MQ=255) tCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGc > 1:84300/1‑150 (MQ=255) tCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGc > 2:1654038/1‑150 (MQ=255) gCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCgg < 2:84300/150‑1 (MQ=255) cAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCTGGCGCTgga > 1:412755/1‑123 (MQ=255) cAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCaaa < 2:909794/141‑1 (MQ=255) ttCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTg > 1:209631/1‑150 (MQ=255) tctcGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGc < 1:1705117/150‑1 (MQ=255) tctcGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGc < 1:1575447/150‑1 (MQ=255) tctcGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGc < 2:1624447/150‑1 (MQ=255) cGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTAc < 1:99049/150‑1 (MQ=255) ttCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTAGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGt < 2:1385285/150‑1 (MQ=255) gttgttGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCTGGCGCTggaggg < 2:2051115/104‑6 (MQ=255) gttgttGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGc > 1:1078054/1‑150 (MQ=255) ttgtGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGcc < 2:2442458/150‑1 (MQ=255) gtgCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCAt > 1:450941/1‑150 (MQ=255) gtgCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGAAATCAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCAt < 1:23458/150‑1 (MQ=255) gtgCACCTGCTCGGCCAGCCCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCAt > 1:81093/1‑150 (MQ=255) gCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCa < 1:1590797/150‑1 (MQ=255) gCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCa > 1:29830/1‑150 (MQ=255) gCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCa < 1:827019/150‑1 (MQ=255) cACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAg > 1:1910596/1‑150 (MQ=255) aCCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAgg > 2:188252/1‑150 (MQ=255) cTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTc > 2:419105/1‑150 (MQ=255) cTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTc > 2:418939/1‑150 (MQ=255) cTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTcgcg < 1:425508/150‑1 (MQ=255) cGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGcggc < 2:1740166/150‑1 (MQ=255) cGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGcggc > 1:139936/1‑150 (MQ=255) ggCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGcggcc > 2:1197430/1‑150 (MQ=255) cAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGcggccggc < 1:74073/150‑1 (MQ=255) aGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCggccggcc > 1:1188266/1‑150 (MQ=255) tCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGc > 1:971612/1‑150 (MQ=255) gAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCAcgg > 2:1420697/1‑150 (MQ=255) tGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCAcggcgg < 1:2350809/150‑1 (MQ=255) gggTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCggg < 1:1197430/150‑1 (MQ=255) gTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGTGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGa < 2:1188266/150‑1 (MQ=255) gTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGTCAGCACGGCGGGGa < 2:1383261/150‑1 (MQ=255) gTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGa > 1:1678694/1‑150 (MQ=255) ccAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCa < 2:1560692/120‑1 (MQ=255) ccAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCa > 1:1560692/1‑120 (MQ=255) cAGCACCAAGGCGCGGATCGAGTTGCTGGCGACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGc > 2:51967/1‑150 (MQ=255) cAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGc > 2:255857/1‑150 (MQ=255) aGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCt < 2:2382232/150‑1 (MQ=255) cACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCttt > 2:152437/1‑150 (MQ=255) cACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCttt < 1:823188/150‑1 (MQ=255) aCCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTg > 1:2173675/1‑150 (MQ=255) cAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATg < 1:268895/142‑1 (MQ=255) cAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGc > 2:677534/1‑150 (MQ=255) aaGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGcc < 2:209631/150‑1 (MQ=255) gATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACcgg < 1:1137731/150‑1 (MQ=255) aTCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACcggg < 2:1078054/150‑1 (MQ=255) aTCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACcggg < 2:1678694/150‑1 (MQ=255) gAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACcggggtc > 2:1581527/1‑150 (MQ=255) aGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACcggggtcg > 2:356777/1‑150 (MQ=255) gTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACcggggtcgg > 2:271632/1‑150 (MQ=255) gTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGACGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACcggggtcgg > 1:1046309/1‑150 (MQ=255) ttGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACcggggtcggg < 1:434122/150‑1 (MQ=255) ttGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACcggggtcggg < 1:433441/150‑1 (MQ=255) ttGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGAAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACcggggtcggg > 1:662908/1‑150 (MQ=255) gCTGGACTCCTTTCCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACcggggtcggggt < 2:662908/150‑1 (MQ=255) cTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACCGGGGTCGGggtg < 1:1420697/150‑1 (MQ=255) tGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGTTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACCGGGGTCGGggtgg > 2:1374717/1‑150 (MQ=255) tGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGc < 2:1201534/130‑1 (MQ=255) tGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGc > 1:1201534/1‑130 (MQ=255) ggCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACCGGGGTCGGggtggt < 1:1581527/150‑1 (MQ=255) cACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACCGGGGTCGGGGTGGTGTa < 1:418939/150‑1 (MQ=255) cACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACCGGGGTCGGGGCGGTGTa > 2:776020/1‑150 (MQ=255) cACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGACAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACCGGGGTCGGGGTGGTGTa > 1:1290698/1‑150 (MQ=255) aCCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGTGGATGGCTTTGGCCTGCACCGGGGTCGGGGTGGTGTAg > 2:267545/1‑150 (MQ=255) aCCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACCGGGGTCGGGGTGGTGTAg > 1:965474/1‑150 (MQ=255) cctctcGCCCCACAGCCCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATAAGGTCGCGGCCGGCCAGCTCGGCGGGGATGGCTTTGGCCTGCACCGGGGTCGGGGTGGTGTAGTc < 2:1110823/148‑1 (MQ=255) ttCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCTGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACCGGGGTCGGGGTGGTGTAGTcc < 2:81093/150‑1 (MQ=255) ttCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCCCCGGGGACGGGCGGGTGTAGTcc > 2:413564/1‑150 (MQ=255) tctcGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACCGGGGGCGGGGTGGTGTAGTCCa > 1:3201/1‑150 (MQ=255) tcGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACCGGGGTCGGGGTGGTGTAGTCCAGt > 2:1895708/1‑150 (MQ=255) cccTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACCGGGGTCGGGGTGGTGTAGTCCAGTtgc < 2:450941/150‑1 (MQ=255) gcAGCGCCTGGCGCTGGAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACCGGGGTCGGggtg < 2:1376904/130‑1 (MQ=255) gcAGCGCCTGGCGCTGGAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACCGGGGTCGGggtg > 1:1376904/2‑131 (MQ=255) aGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACCGGGGTCGGGGTGGTGTAGTCCAGTTGCTGCAGc < 1:490131/150‑1 (MQ=255) gcgcCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGc > 2:2235079/1‑109 (MQ=255) gcgcCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGAGTACCGGGGATGGCTTTGGCCTGCACCGTGGGCGGGGTGGTGTAGTCCAGTTGCTGCAGCg > 1:25162/1‑150 (MQ=255) gcCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACcgtggtcggggt < 2:700897/125‑1 (MQ=255) gcCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACcggggtcggggt > 1:700897/1‑125 (MQ=255) gcCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACCGGGGTCGGGGTGGTGTAGTCCAGTTGCTGCAGCGTg > 2:1979352/1‑150 (MQ=255) | TGACCCCGCCATACACCGCGTAAGTAGTCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACCGGGGTCGGGGTGGTGTAGTCCAGTTGCTGCAGCGTGCG > NC_002947/5427814‑5428111 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |