| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,529,408 | C→G | 6.4% | intergenic (‑574/+20) | ydfG ← / ← livF‑II | bifunctional NADP‑dependent 3‑hydroxy acid dehydrogenase/malonic semialdehyde reductase/ABC transporter ATP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,529,408 | 0 | C | G | 6.4% | 247.3 / 7.3 | 78 | intergenic (‑574/+20) | ydfG/livF‑II | bifunctional NADP‑dependent 3‑hydroxy acid dehydrogenase/malonic semialdehyde reductase/ABC transporter ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base C (34/39); new base G (3/2); total (37/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.64e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.67e-01 | |||||||||||
TGAGCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAGCGCATGGTTGGCG > NC_002947/5529260‑5529557 | tGAGCGATATGCCACCATGTTTTCCACAGGCGGCTCCACCCTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGctgcact < 2:96929/150‑1 (MQ=255) gCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGctgcactgca < 2:1091640/150‑1 (MQ=255) gATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGc < 2:1892955/150‑1 (MQ=255) atGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCAGTGCAGcccc < 2:107805/150‑1 (MQ=255) atGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGcccc < 1:93903/150‑1 (MQ=255) atGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGcccc < 1:1629417/150‑1 (MQ=255) gCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCtt > 1:1416090/1‑150 (MQ=255) ccaccaTGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTa < 2:2252222/150‑1 (MQ=255) caccaTGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTaa < 2:1303902/150‑1 (MQ=255) caccaTGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTaa > 2:1443087/1‑150 (MQ=255) caccaTGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTaa > 2:2046240/1‑150 (MQ=255) caccaTGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTaa < 1:2001616/150‑1 (MQ=255) accaTGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGTAGGGGGCTGCACTGCAGCCCCTTAac < 1:1640784/150‑1 (MQ=255) tttCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTc > 2:1894939/1‑150 (MQ=255) ttCCACAGGCGGCTCCACACTATCCGTGGAAAAGTGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCa < 1:2213816/150‑1 (MQ=255) ccACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGt < 2:727527/150‑1 (MQ=255) acacTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGa > 2:1628899/1‑147 (MQ=255) acacTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGa < 1:1628899/147‑1 (MQ=255) acacTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCACATTAACACAACTCAGTGCCCGCCCAGATaa < 1:2233181/150‑1 (MQ=255) cTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCg < 2:1416090/150‑1 (MQ=255) tATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGt > 2:1996924/1‑150 (MQ=255) tCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTa < 1:1451047/150‑1 (MQ=255) tCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTa < 1:2309443/150‑1 (MQ=255) cGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACg < 2:2215690/150‑1 (MQ=255) cGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACg < 1:1996924/150‑1 (MQ=255) gTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGc > 2:1340801/1‑150 (MQ=255) gTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCGGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGc > 2:1639735/1‑150 (MQ=255) tGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTGACGCa > 2:1733304/1‑150 (MQ=255) ggAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCAc < 1:2398238/150‑1 (MQ=255) aaanGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACtt > 2:1509686/1‑150 (MQ=255) aaaaGAGTTGGCCTGTGGAAACAATAACCTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACtt > 1:1243495/1‑150 (MQ=255) aaGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGcccc > 2:817242/1‑106 (MQ=255) aaGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGcccc < 1:817242/106‑1 (MQ=255) ttGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGctgcactgca > 1:207918/1‑96 (MQ=255) ttGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGctgcactgca < 2:207918/96‑1 (MQ=255) ttGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCAtt < 1:2046240/150‑1 (MQ=255) tGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTg < 1:1988995/150‑1 (MQ=255) gCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGAc > 1:1445247/1‑150 (MQ=255) gCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGAc < 1:1894939/150‑1 (MQ=255) ccTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGGGTCGAGCATTTTAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGAcc < 2:1243495/150‑1 (MQ=255) cTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGTTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCa > 2:2373826/1‑150 (MQ=255) cTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCa > 1:1962016/1‑150 (MQ=255) cTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTCAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCa > 1:986656/1‑150 (MQ=255) tgtgGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGTTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCaa < 1:2373826/150‑1 (MQ=255) gttgAAACAATTGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAAc < 2:531/147‑1 (MQ=255) ggAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAg > 1:198966/1‑150 (MQ=255) aaaCAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGtt > 1:2110909/1‑150 (MQ=255) aaCAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACCCCTCAGTGCCCGCCCAGCTAAGCGTTACGCACTTCCTCACTGACCTCCAGTTc < 2:1912017/150‑1 (MQ=255) aaTGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTg > 2:2246700/1‑150 (MQ=255) aTGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGc > 1:1151689/1‑150 (MQ=255) ggCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGccc > 1:2450976/1‑150 (MQ=255) gCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGcccg < 1:1443087/150‑1 (MQ=255) gCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGcccg < 1:1340801/150‑1 (MQ=255) taaaGGAATATGGGTGTCTTTCGGCCGAAAATTACTACGTGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGcccggtccc < 2:2358674/148‑1 (MQ=255) aaGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGcccggtcccga > 1:2358674/1‑149 (MQ=255) gggTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCAGTGCAGcccc < 1:2006666/66‑1 (MQ=255) gggTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCAGTGCAGcccc > 2:2006666/1‑66 (MQ=255) gtgtgtTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTcc > 1:697392/1‑108 (MQ=255) gtgtgtTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTcc < 2:697392/108‑1 (MQ=255) tttCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGaa < 1:761569/143‑1 (MQ=255) tttCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGaa > 2:761569/1‑143 (MQ=255) tttCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGccc < 1:1093556/150‑1 (MQ=255) cgtgagaAGTGAACGACAAGTTTTCCACATTGAGAAGGGGGCTCCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGTTATGCTTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATCCGGATCTTCCCGtt < 2:986656/147‑1 (MQ=255) cGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGtt > 2:1943607/1‑150 (MQ=255) cGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGtt < 1:1509686/150‑1 (MQ=255) ggAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATcac > 1:1044451/1‑150 (MQ=255) ggAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATcac < 1:1943607/150‑1 (MQ=255) gACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGcccg < 2:1928371/110‑1 (MQ=255) gACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGcccg > 1:1928371/1‑110 (MQ=255) ttttCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCt < 1:1806461/81‑1 (MQ=255) ttttCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCt > 2:1806461/1‑81 (MQ=255) cacaTTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGAc < 2:2450976/150‑1 (MQ=255) acaTTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGcc > 1:677612/1‑96 (MQ=255) acaTTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGcc < 2:677612/96‑1 (MQ=255) gagaAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGAc > 1:376459/1‑77 (MQ=255) gagaAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGAc < 2:376459/77‑1 (MQ=255) aaGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAgc > 1:485539/1‑150 (MQ=255) aaggggCTGCAGTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAgcg > 2:413288/3‑150 (MQ=255) ggggCTGCAGTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAGCGCa > 2:941352/1‑150 (MQ=255) ggggCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGACCGTTAACCATCACATAGGCCCGGTCCGACAGTTTCAGCGCa > 2:2018211/1‑150 (MQ=255) ggCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGCTCCGCCAGTTTCCGCGCagg > 2:134053/1‑148 (MQ=255) gCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAGCGCATgg > 1:1415411/1‑150 (MQ=255) tgcagtgcagCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAGCGCATGGtt > 2:1536863/1‑150 (MQ=255) tgcactgcaGCGCCGCAACACCACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAGCGCATGGtt < 2:1962016/150‑1 (MQ=255) tgcactgcaGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGc < 2:1731613/103‑1 (MQ=255) tgcactgcaGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGc > 1:1731613/1‑103 (MQ=255) tgcactgcaGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGGCATGCGAATCCGCCCGTTGACCAGCACATAGGCCCGGTCCGACAGTTTCAGCGCATGGtt > 2:2343607/1‑150 (MQ=255) gcactgcaGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAGCGCATGGTTg < 2:1415411/150‑1 (MQ=255) actgcaGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTAATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAGCGCATGGTTGGc > 2:2398223/1‑150 (MQ=255) ctgcaGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAGCGCATGGTTGGCg < 2:485539/150‑1 (MQ=255) | TGAGCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAGCGCATGGTTGGCG > NC_002947/5529260‑5529557 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |