BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	5,743,906	G→T	5.7%	A672E (GCG→GAG)	glgP ←	glycogen phosphorylase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	5,743,906	0	G	T	5.7%	387.3 / 6.4	121	A672E (GCG→GAG)	glgP	glycogen phosphorylase
Reads supporting (aligned to +/- strand): ref base G (61/53); new base T (4/3); total (65/56)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.75e-01

Only 100 of 124 total aligned reads displayed.

GGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAGGTCAGGCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGCCGCCGGGATGATGCTCTCGGCCAGGCTGACGTTGTAGTTGGGCAGGAACACCACCTTCAGCAGGCCGCGC  >  NC_002947/5743761‑5744055

ggCTATGGCATCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAGGTCAGGCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCAcc                                                                                                                                                   >  1:1541452/1‑150 (MQ=255)

 gCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAGGTCAGGCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCa                                                                                                                                                  >  2:1991073/1‑150 (MQ=255)

  cTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAGGTCAGGCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCAt                                                                                                                                                 <  2:734273/150‑1 (MQ=255)

     tGGCAGCATTGGCGCCAAAATCACCGGCACTCTTGCTCACTTCAACCTGCTGCGAGGTCAGGCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGa                                                                                                                                              <  2:2336759/150‑1 (MQ=255)

     tGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAGGTCAGGCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGCGCTCACCATTgg                                                                                                                                              <  1:1099180/150‑2 (MQ=255)

       gcagcaTTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAGGTCAGGCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAgg                                                                                                                                            <  1:1722449/150‑1 (MQ=255)

       gcagcaTTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAGGTCAGGCCAAAGATG‑AACATGTTGACGGCCCCCACCTGTTGGCACATCTCCACACCGGCCCCATCAACCGCGGCAATGTTGGGCGCACAATTTAgg                                                                                                                                            >  2:1098833/1‑150 (MQ=255)

        cagcaTTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAGGTCAGGCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGGGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGc                                                                                                                                           >  1:22602/1‑150 (MQ=255)

         agcaTTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAGGTCAGGCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGcc                                                                                                                                          >  2:1346310/1‑150 (MQ=255)

             ttGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAGGTCAGGCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAAc                                                                                                                                      <  1:254140/150‑1 (MQ=255)

                gcgcCAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAGGTCAGGCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGTCAATGGTGAGCGCACCATTGAGGCCGAACTTc                                                                                                                                   <  2:1344856/150‑1 (MQ=255)

                   ccAAAATCACCGGCACGCTTGCGCGCTTCATCCCGATGTGAGGTCAGGCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATg                                                                                                                                <  2:190249/150‑1 (MQ=255)

                   ccAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAGGTCAGGCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATg                                                                                                                                >  2:1724462/1‑150 (MQ=255)

                       aaTCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAGGTCAGGCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGc                                                                                                                            <  2:1474941/150‑1 (MQ=255)

                        aTCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAGGTCAGGCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCt                                                                                                                           <  2:1541452/150‑1 (MQ=255)

                         tCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAGGTCAGGCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTg                                                                                                                          >  1:715244/1‑150 (MQ=255)

                           aCCGCCACGCTTGCGCGCTTCAACATGCTGCGAGGGCAGACCGAAGGTG‑GACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGt                                                                                                                        >  1:461247/1‑150 (MQ=255)

                              ggCACGCTTGCGCGCTTCAACCTGCTGCGAGGTCAGGCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTAcc                                                                                                                     >  1:247062/1‑150 (MQ=255)

                               gCACGCTTGCGCGCTTCAACCTGCTGCGAAGTACGGTGAAA‑ATGTAATATGTTGTCGGCTCCCACCTGTTAGCACGTCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCg                                                                                                                    <  1:2377591/150‑1 (MQ=255)

                                 aCGCTTGCGCGCTTCAACCTGCTGCGAGGTCAGGCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGc                                                                                                                            >  2:2075241/1‑140 (MQ=255)

                                 aCGCTTGCGCGCTTCAACCTGCTGCGAGGTCAGGCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGc                                                                                                                            <  1:2075241/140‑1 (MQ=255)

                                 aCGCTTGCGCGCTTCAACCTGCTGCGAGGTCAGGCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGa                                                                                                                  >  1:394515/1‑150 (MQ=255)

                                   gCTTGCGCGCTTCAACCTGCTGCGAGGTCAGGCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTg                                                                                                                          <  2:825387/140‑1 (MQ=255)

                                   gCTTGCGCGCTTCAACCTGCTGCGAGGTCAGGCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTg                                                                                                                          >  1:825387/1‑140 (MQ=255)

                                       gcgcgcTTCAACCTGCTGCGAGGTCAGGCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCAAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTc                                                                                                            <  2:557882/150‑1 (MQ=255)

                                         gcgcTTCAACCTGCTGCGAGGTCAGGCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGt                                                                                                          <  2:2083542/150‑1 (MQ=255)

                                           gcTTCAACCTGCTGCGAGGTCAGGCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCAACGTTGGCTCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTaa                                                                                                        <  1:289990/150‑1 (MQ=255)

                                                aaCCTGCTGCGAGGTCAGGCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCcgc                                                                                                   >  1:2114842/1‑150 (MQ=255)

                                                     gctgcGAGGTCAGGCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTgg                                                                                              <  2:1618381/150‑1 (MQ=255)

                                                     gctgcGAGGTCAGGCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTgg                                                                                              <  1:2065469/150‑1 (MQ=255)

                                                       tgcGAGGTCAGGCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGat                                                                                            >  2:2309403/1‑150 (MQ=255)

                                                           aGGTCAGGCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCt                                                                                        <  2:2114842/150‑1 (MQ=255)

                                                             gTCAGGCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGc                                                                                      >  2:776660/1‑150 (MQ=255)

                                                              tCAGGCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTGCGTAACCCGCGGTGGATAgctgct                                                                                     >  1:104929/1‑150 (MQ=255)

                                                               cAGGCCAAAGATG‑AACGTGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTc                                                                                    <  2:1218741/150‑1 (MQ=255)

                                                                  gCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGa                                                                                 >  2:2280378/1‑150 (MQ=255)

                                                                  gCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGa                                                                                 >  2:1763317/1‑150 (MQ=255)

                                                                  gCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGa                                                                                 >  2:406896/1‑150 (MQ=255)

                                                                    cAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGaaa                                                                               >  2:11855/1‑150 (MQ=255)

                                                                    cAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGaaa                                                                               >  2:586639/1‑150 (MQ=255)

                                                                     aaaGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAg                                                                              >  2:959384/1‑150 (MQ=255)

                                                                     aaaGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGCCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAg                                                                              <  1:366900/150‑1 (MQ=255)

                                                                     aaaGATG‑AACATGTTGTAGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAAGGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACGCGCGGTGGATATCTGTCCGGAAAg                                                                              >  2:363713/1‑150 (MQ=255)

                                                                        gATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTc                                                                           <  1:586639/150‑1 (MQ=255)

                                                                        gATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTc                                                                           <  1:1709187/150‑1 (MQ=255)

                                                                         aTG‑AACATGTTGTCGGCCCCCACATGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTcc                                                                          <  2:1763230/150‑1 (MQ=255)

                                                                           g‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTccgc                                                                        >  1:354005/1‑150 (MQ=255)

                                                                             aaCATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTcggcc                                                                       >  1:991405/1‑150 (MQ=255)

                                                                                 tgttgtCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTccgccgccg                                                                   <  2:580606/150‑1 (MQ=255)

                                                                                  gttgtCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATg                                                                                                                                >  1:1934025/1‑88 (MQ=255)

                                                                                  gttgtCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATg                                                                                                                                <  2:1934025/88‑1 (MQ=255)

                                                                                  gttgtCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGCCGCCgg                                                                  >  1:136336/1‑150 (MQ=255)

                                                                                        ggCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCAtt                                                                                                                                                >  1:845857/1‑66 (MQ=255)

                                                                                        ggCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCAtt                                                                                                                                                <  2:845857/66‑1 (MQ=255)

                                                                                         gCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGCCGCCGGGatgatg                                                           >  2:1345882/1‑150 (MQ=255)

                                                                                             ccACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCATAGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGACGCCGGGATGATGctct                                                       >  1:866904/1‑150 (MQ=255)

                                                                                              cACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAATGTCCGCCGCCGGGATGATGCtctc                                                      <  1:917956/150‑1 (MQ=255)

                                                                                              cACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGCCGCCGGGATGATGCtctc                                                      >  1:2312227/1‑150 (MQ=255)

                                                                                               aCCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCgg                                                                                                 >  1:589775/1‑106 (MQ=255)

                                                                                               aCCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGCCGCCGGGATGATGCTCTCg                                                     >  1:1564969/1‑150 (MQ=255)

                                                                                                 cTGTTCGCACATATCCACGTTGTCGCCATCGAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGCCGCCGGGATGATGCTCTAGGc                                                   >  2:1402975/1‑150 (MQ=255)

                                                                                                    ttCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCt                                                                                                                           <  1:97648/75‑1 (MQ=255)

                                                                                                       gCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCcgc                                                                                                   >  1:1148930/1‑96 (MQ=255)

                                                                                                       gCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGCCGCCGGGATGATGCTCTCGGCCAGGCt                                             >  1:1915045/1‑150 (MQ=255)

                                                                                                       gCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGCCGCCGGGATGATGCTCTCGGCCAGGCt                                             >  2:2127931/1‑150 (MQ=255)

                                                                                                         acaTCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGCCGCCGGGATGATGCTCTCGGCCAg                                                <  1:2326125/145‑1 (MQ=255)

                                                                                                         acaTCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGCCGCCGGGATGATGCTCTCGGCCAGGCTGa                                           >  1:1766964/1‑150 (MQ=255)

                                                                                                          aaTCTCCACGTTGGCGCCAGCCAGAGAGCCAATGGTGAGCGCACCATTGCGGCCGAACTTCATGTTGCTGGTAAAGGAAGCTAAGTAACCCGCGGTTGATATCTGCTCAGAAAGGTCCGCCGCCGGGATGATGCACTCGGCCAGGCTGAc                                          <  1:501473/149‑1 (MQ=255)

                                                                                                           aTCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGatat                                                                                          >  2:1245620/1‑101 (MQ=255)

                                                                                                           aTCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGatat                                                                                          <  1:1245620/101‑1 (MQ=255)

                                                                                                             ctcCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGCCGCCGGGATGATGCTCTCGGCCAGGCTGACGtt                                       <  2:247062/150‑1 (MQ=255)

                                                                                                              tcCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGt                                                                            <  2:340423/112‑1 (MQ=255)

                                                                                                              tcCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGt                                                                            >  1:340423/1‑112 (MQ=255)

                                                                                                              tcCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGCCGCCGGGATGATGCTCTCGGCCAGGCTGACGTTg                                      <  1:529492/150‑1 (MQ=255)

                                                                                                               ccACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGCCGCCGGGATGATGCTCTCGGCCAGGCTGACGCTGt                                     >  2:1983532/1‑150 (MQ=255)

                                                                                                                cACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGCCGCCGGGATGATGCTCTCGGCCAGGCTGACGTTGTa                                    >  1:1575056/1‑150 (MQ=255)

                                                                                                                cACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGAGGTGGATATCTGCTCGGAAAGGTCCGCCGCCGGGATGTTGCTCTCGGCCAGGCTGACGTTGTa                                    <  2:394515/150‑1 (MQ=255)

                                                                                                                    ttGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGCCGCCGGGATGATGCTCTCGGCCAGGATGACGTTGTAGTTg                                <  1:2028214/150‑1 (MQ=255)

                                                                                                                     tGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGCCGCCGGGATGATGCTCTCGGCCAGGCTGACGTTGTAGTTgg                               <  1:2280378/150‑1 (MQ=255)

                                                                                                                         gcCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGt                                                                                                >  2:2398915/1‑81 (MQ=255)

                                                                                                                         gcCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGCCGCCGGGATGATGCTCTCGGCCAGGCTGACGTTGTAGTTGGGCAg                           >  2:539616/1‑150 (MQ=255)

                                                                                                                         gcCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGCCGCCGGGATGATGCTCTCGGCCAGGCTGACGTTGTAGTTGGGCAg                           <  1:1955512/150‑1 (MQ=255)

                                                                                                                            aTCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGCCGCCGGGGTGATGCTCTCGGCCAGGCTGACGTTTGGGTGGGGCGGGaa                        >  1:491172/1‑150 (MQ=255)

                                                                                                                            aTCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGCCGCCGGGATGATGCTCTCGGCCAGGCTGACGTTGTAGTTGGGCAggca                        <  2:1566119/150‑3 (MQ=255)

                                                                                                                             tCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGCCGCCGGGATGATGCTCTCGGCCAGGCTGACGTTGTAGTTGGGCAGGAac                       <  1:1724462/150‑1 (MQ=255)

                                                                                                                             tCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGCCGCCGGGATGATGCTCTCGGCCAGGCTGACGTTGTAGTTGGGCAGGAac                       >  1:56829/1‑150 (MQ=255)

                                                                                                                               cAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGCCGCCGGGATGATGCTCTCgg                                                    <  2:848034/119‑1 (MQ=255)

                                                                                                                               cAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGCCGCCGGGATGATGCTCTCgg                                                    >  1:848034/1‑119 (MQ=255)

                                                                                                                               cAGGGTGCCAATGGTGAGCGCAACATTGAGGCCGAACTTCATATTGCTGGTAACGGAAGCTTCGTAACCCGCGGTGGATATATGCTCGGAAAGGTCCGCCGCCGGGATGATGCTCTCGGCCAGGCTGACGTTGTAGTTGGGCAGGAacac                     >  2:1040864/1‑150 (MQ=255)

                                                                                                                                  ggcctcAATGGTGCGCTCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGCCGCCGGGATGATGCtctc                                                      <  2:795139/109‑1 (MQ=255)

                                                                                                                                   gTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGCCGCCGGGATGATGCTCTCGGCCAGGCTGACGTTGTAGTTGGGCAGGAACaccacc                 <  1:1428742/150‑1 (MQ=255)

                                                                                                                                      tcAATGGTGCGCTCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGCCGCCGGGGTGATGCTCTCGGCCAGGCTGACGTTGTAGtt                                 >  2:1185439/2‑131 (MQ=255)

                                                                                                                                      tcAATGGTGCGCTCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGCAAAGGTCCGCCGCCGGGATGATGCTCTCGGCCAGGCTGACGTTGTAGtt                                 <  1:1185439/130‑1 (MQ=255)

                                                                                                                                      tcAATGGTGCGCTCACCATTGAGGCACTACCGGATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGCCGCCGGGATGATGCTCTCGGCCAGGCTGACGTTGTAGTTGGGCAGGAACACCACCTTc              >  1:1024594/2‑150 (MQ=255)

                                                                                                                                        aaTGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGCCGCCGGGATGATGCTCTCGGCCAGGCTGACGTTGTAGTTGGGCAGGAACACCACCTTcag            >  1:1724281/1‑150 (MQ=255)

                                                                                                                                          tgttGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGCCGCCGGGATGATGCTCTCGGCCAGGCTGACGTTGTAGTTGGGCAGGAACACCACCTTcagca          <  2:368478/147‑1 (MQ=255)

                                                                                                                                             tGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAATCTTCGTGACCCGCGGTGGATATCTGCTCGGGGGGGTCCGCCGCCGGGATGATGCTCTCGGCCAGGCTGACGTTGTAGTTGGGCAGGAACACCACCTTCAGCAGGc       <  1:1345882/150‑1 (MQ=255)

                                                                                                                                              gAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGCCGCCGGGATGATGCTCTCGGCCAGGCTGACGTTGTAGTTGGGCAGGAACACCACCTTCAGCAGGcc      >  2:968906/1‑150 (MQ=255)

                                                                                                                                                 cgcACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGCCGCCGGGATGATGCTCTCGGCCAGGCTGACGTTGTAGTTGGGCAGGAACACCACCTTCAGCAGGCcgcg   >  1:689662/1‑150 (MQ=255)

                                                                                                                                                  gcACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGCCGCCGGGATGATGCTCTCGGCCAGGCTGACGTTGTAGTTGGGCAGGAACACCACCTTCAGCAGGCCgcgc  >  1:130806/1‑150 (MQ=255)

GGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAGGTCAGGCCAAAGATG‑AACATGTTGTCGGCCCCCACCTGTTCGCACATCTCCACGTTGGCGCCATCCAGGGTGCCAATGGTGAGCGCACCATTGAGGCCGAACTTCATGTTGCTGGTACCGGAAGCTTCGTAACCCGCGGTGGATATCTGCTCGGAAAGGTCCGCCGCCGGGATGATGCTCTCGGCCAGGCTGACGTTGTAGTTGGGCAGGAACACCACCTTCAGCAGGCCGCGC  >  NC_002947/5743761‑5744055

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`