Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,843,556 G→C 5.8% G41A (GGC→GCC)  PP_5122 → GMC family oxidoreductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,843,5560GC 5.8% 436.8 / 14.1 137G41A (GGC→GCC) PP_5122GMC family oxidoreductase
Reads supporting (aligned to +/- strand):  ref base G (62/67);  new base C (4/4);  total (66/71)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.37e-01

Only 100 of 145 total aligned reads displayed.

ATCTGAAAACAACAAGAGCATCGCCAATGCCTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTACGCCAGCCTGTACCAGGAAGGGCTGGGGCGCATGAGC  >  NC_002947/5843409‑5843704
                                                                                                                                                   |                                                                                                                                                    
aTCTGAAAACAACAAGAGCATCGCCAATGCCTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCcggcg                                                                                                                                                    >  2:1046270/1‑150 (MQ=255)
  cTGAAAACAACAAGAGCATCGCCAATGCCTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCggcggc                                                                                                                                                  <  1:1836501/150‑1 (MQ=255)
    gAANACAACAAGAGCATCGCCAATGCCTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGAGCGGCAGTGGTGCCGGCGgcgc                                                                                                                                                >  2:1504673/1‑150 (MQ=255)
    gAAAACAACAAGAGCATTGCCAATGCCTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGgcgc                                                                                                                                                >  1:791523/1‑150 (MQ=255)
         caacaaGAGCATCGCCAATGCCTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGTCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGccacca                                                                                                                                           >  1:820846/1‑150 (MQ=255)
         caacaaGAGCATCGCCAATGCCTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGccacca                                                                                                                                           >  2:2175830/1‑150 (MQ=255)
           acaaGAGCATCGCCAATGCCTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGt                                                                                                                                         >  1:763779/1‑150 (MQ=255)
               gagCATCGCCAATGCCTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGTCAGTGGTGCCGGCGGCGCCACCAGTgcgc                                                                                                                                     <  1:1046270/150‑1 (MQ=255)
                agCATCGCCAATGCCTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCa                                                                                                                                    <  1:1034560/150‑1 (MQ=255)
                agCATCGCCAATGCCTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCa                                                                                                                                    <  1:2428766/150‑1 (MQ=255)
                   aTCGCCAATGCCTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGAt                                                                                                                                 <  2:1058330/150‑1 (MQ=255)
                     cGCCAATGCCTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGc                                                                                                                               >  1:1447092/1‑150 (MQ=255)
                       ccAATGCCTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTc                                                                                                                             >  1:29115/1‑150 (MQ=255)
                         aaTGCCTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAg                                                                                                                           >  1:680790/1‑150 (MQ=255)
                         aaTGCCTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAg                                                                                                                           >  1:1805289/1‑150 (MQ=255)
                             ccTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCt                                                                                                                       >  1:580857/1‑150 (MQ=255)
                              cTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTg                                                                                                                      >  2:447966/1‑150 (MQ=255)
                              cTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGAGAAGATGTTGTGCGCTg                                                                                                                      >  2:510682/1‑150 (MQ=255)
                               tGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCCGTGCGCAGATGCTCAGCGCTGc                                                                                                                     >  1:639353/1‑150 (MQ=255)
                                   cccGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCCCGACCTGGTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGt                                                                                                                 >  2:1800996/1‑150 (MQ=255)
                                   cccGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGt                                                                                                                 >  2:1800801/1‑150 (MQ=255)
                                   cccGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGt                                                                                                                 >  2:1368160/1‑150 (MQ=255)
                                    ccGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGtt                                                                                                                >  1:2151980/1‑150 (MQ=255)
                                       aCCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCa                                                                                                             >  2:1269871/1‑150 (MQ=255)
                                         ccGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAg                                                                                                           <  1:938718/150‑1 (MQ=255)
                                         ccGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACATGTAAATGAAATCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAg                                                                                                           <  2:2019871/150‑1 (MQ=255)
                                             ttCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTAc                                                                                                       <  1:2289471/150‑1 (MQ=255)
                                                gCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTActgc                                                                                                    <  2:321922/150‑1 (MQ=255)
                                                 ccAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCg                                                                                                                   >  1:1061388/1‑134 (MQ=255)
                                                 ccAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTActgct                                                                                                   >  1:2317999/1‑150 (MQ=255)
                                                 ccAAGGCATCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTActtct                                                                                                   >  2:816068/1‑150 (MQ=255)
                                                   aaGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGa                                                                                                 <  1:466571/150‑1 (MQ=255)
                                                   aaGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCCGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGa                                                                                                 >  1:541212/1‑150 (MQ=255)
                                                       ccTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCAAGACCTGGTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGCTTCAAGGTACTGCTGATCga                                                                                             >  2:2167685/1‑150 (MQ=255)
                                                        cTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCgaa                                                                                            <  1:1632475/150‑1 (MQ=255)
                                                        cTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCgaa                                                                                            <  1:2011406/150‑1 (MQ=255)
                                                        cTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGCACTGCTGATCgaa                                                                                            >  2:607812/1‑150 (MQ=255)
                                                           gAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCgaagaa                                                                                         <  1:349737/150‑1 (MQ=255)
                                                            aaCGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGaagaag                                                                                        <  2:1447092/150‑1 (MQ=255)
                                                             aCGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAgg                                                                                       <  2:580857/150‑1 (MQ=255)
                                                               gcgGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGCCCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGcc                                                                                     <  1:257812/150‑1 (MQ=255)
                                                                 ggCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCt                                                                                                                       <  2:1760578/114‑1 (MQ=255)
                                                                 ggCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCt                                                                                                                       >  1:1760578/1‑114 (MQ=255)
                                                                 ggCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCaa                                                                                                            >  2:1367228/1‑125 (MQ=255)
                                                                 ggCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCaa                                                                                                            <  1:1367228/125‑1 (MQ=255)
                                                                 ggCTGGATCACCCACGACGCCTCGCGCCCGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGAAGTGATGCCGGCGGCGACACCAGTCCGTTGAAGTTGTGGTCTTCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCa                                                                                   >  1:2378396/1‑150 (MQ=255)
                                                                  gCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCAc                                                                                  <  2:2329657/150‑1 (MQ=255)
                                                                    tGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCcggcg                                                                                                                                                    >  1:338803/1‑82 (MQ=255)
                                                                      gATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGaa                                                                              >  1:2108292/1‑150 (MQ=255)
                                                                        tCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCgaa                                                                                            >  2:2249927/1‑134 (MQ=255)
                                                                        tCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCgaa                                                                                            <  1:2249927/134‑1 (MQ=255)
                                                                         cACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGNGCTGCCNGTTTCAAGGTACNGCTGATCGAAGAAGGCCCACTGAANAc                                                                           <  1:2167685/150‑1 (MQ=255)
                                                                           cccACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACca                                                                         <  2:1805289/150‑1 (MQ=255)
                                                                             cACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACcagc                                                                       >  2:469059/1‑150 (MQ=255)
                                                                              acgacgCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACcagca                                                                      >  1:2314177/1‑150 (MQ=255)
                                                                               cgacgCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGTTGATCGAAGAAGGCCCACTGAAGACcagcag                                                                     <  2:29115/150‑1 (MQ=255)
                                                                                   gCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGAAATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGAt                                                                 <  1:125920/150‑1 (MQ=255)
                                                                                               gAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACctgctg                                                     <  2:763779/150‑1 (MQ=255)
                                                                                                aGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCCCCCGCTgg                                                    <  2:2314177/150‑1 (MQ=255)
                                                                                                aGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTgg                                                    <  2:2314131/150‑1 (MQ=255)
                                                                                                 gCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGa                                                                                                 <  2:1919359/104‑1 (MQ=255)
                                                                                                 gCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGa                                                                                                 >  1:1919359/1‑104 (MQ=255)
                                                                                                  cACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCaa                                                                                                            <  2:2438789/92‑1 (MQ=255)
                                                                                                   aCGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGgaga                                                 <  2:1861420/150‑1 (MQ=255)
                                                                                                   aCGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGgaga                                                 <  2:541212/150‑1 (MQ=255)
                                                                                                     gACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGtt                                                                                                                <  1:2110793/85‑1 (MQ=255)
                                                                                                     gACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGtt                                                                                                                >  2:2110793/1‑85 (MQ=255)
                                                                                                     gACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGc                                               >  1:2049716/1‑150 (MQ=255)
                                                                                                     gACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGc                                               >  1:1559260/1‑150 (MQ=255)
                                                                                                      aCCTGTTTTTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGTCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCg                                              >  2:1483972/1‑150 (MQ=255)
                                                                                                       ccTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGAGCCAACTACCTGCTGGAGAGCGa                                             >  1:122210/1‑150 (MQ=255)
                                                                                                        cTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGaa                                            <  2:877677/150‑1 (MQ=255)
                                                                                                         tGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAg                                           <  2:160768/150‑1 (MQ=255)
                                                                                                                  aGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTACGCCa                                  >  1:1869770/1‑150 (MQ=255)
                                                                                                                  aGGCCGACATTGCCATGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTACGCCa                                  <  2:2439781/150‑1 (MQ=255)
                                                                                                                    gCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTACGCCAGc                                <  2:2131333/150‑1 (MQ=255)
                                                                                                                      cGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGaa                                                                              >  2:143431/1‑102 (MQ=255)
                                                                                                                      cGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGaa                                                                              <  1:143431/102‑1 (MQ=255)
                                                                                                                             gCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGAc                                                                           >  1:2264201/1‑98 (MQ=255)
                                                                                                                             gCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGAc                                                                           <  2:2264201/98‑1 (MQ=255)
                                                                                                                               cGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCa                                                                                   <  2:576392/88‑1 (MQ=255)
                                                                                                                                gTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTACGCCAGCCTGTACCAGGaa                    <  1:1119228/150‑1 (MQ=255)
                                                                                                                                gTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTACGCCAGCCTGTACCAGGaa                    <  2:154461/150‑1 (MQ=255)
                                                                                                                                 tGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTACGCCAGCCTGTACCAGGAAg                   >  2:549850/1‑150 (MQ=255)
                                                                                                                                    tCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGc                                               <  1:590783/119‑1 (MQ=255)
                                                                                                                                    tCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTACGCCAGCCTGTACCAGGAAGGGc                <  1:1302615/150‑1 (MQ=255)
                                                                                                                                      ggCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTACGCCAGCCTGTACCAGGAAGGGCTg              <  1:475730/150‑1 (MQ=255)
                                                                                                                                      actggtggcgCCGCCGGCACCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTACGCCAGc                                <  1:508640/128‑1 (MQ=255)
                                                                                                                                       gCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTACGCCAGCCTGTACCAGGAAGGGCTgg             <  1:1414380/150‑1 (MQ=255)
                                                                                                                                       ctggtggcgCCGCCGGCACCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTa                                       >  2:1871932/4‑124 (MQ=255)
                                                                                                                                       ctggtggcgCCGCCGGCACCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTa                                       <  1:1871932/121‑1 (MQ=255)
                                                                                                                                        tggtggcgCCGCCGGCACCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACcagcag                                                                     <  1:919285/91‑1 (MQ=255)
                                                                                                                                        tggtggcgCCGCCGGCACCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCGGATCGAAGAAGGCCCACTGAAGACcagcag                                                                     >  2:919285/3‑93 (MQ=255)
                                                                                                                                        cAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTACGCCAGCCTGTACCAGGAAGGGCTggg            <  1:1568343/150‑1 (MQ=255)
                                                                                                                                          gtggcgCCGCCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGaa                                                                              <  2:1112603/82‑1 (MQ=255)
                                                                                                                                             gtgCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTACGCCAGCCTGTACCAGGAAGGGCTGGGGCGCa       <  1:1800996/150‑1 (MQ=255)
                                                                                                                                             gtgCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTACGCCAGCCTGTACCAGGAAGGGCTGGGGCGCa       <  1:1800801/150‑1 (MQ=255)
                                                                                                                                              tgCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTACGCCAGCCTGTACCAGGAAGGGCTGGGGCGCAt      >  1:1249945/1‑150 (MQ=255)
                                                                                                                                                ccGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAACACCAGCAGCGATTTCCACCTGCTGGAGAGCGTAGCCTACGCCAGCCTGTACCAGGAAGGGCTGGGGCGCATGa    <  1:556394/150‑1 (MQ=255)
                                                                                                                                                 cggcggCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTACGCCAGCCTGTACCAGGAAGGGCTGGGGCGCATGAg   >  2:606242/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
ATCTGAAAACAACAAGAGCATCGCCAATGCCTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTACGCCAGCCTGTACCAGGAAGGGCTGGGGCGCATGAGC  >  NC_002947/5843409‑5843704

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑