| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 514,023 | C→T | 6.4% | intergenic (+54/+23) | yhfA → / ← PP_0426 | hypothetical protein/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 514,023 | 0 | C | T | 6.4% | 255.6 / 4.4 | 89 | intergenic (+54/+23) | yhfA/PP_0426 | hypothetical protein/membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (47/35); new base T (2/4); total (49/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CTGTCGGCGGAAAAGTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATG > NC_002947/513877‑514172 | cTGTCGGCGGAAAAGTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGGAGCGGGTTCACCCGCTTCCa < 1:479422/150‑1 (MQ=255)cTGTCGGCGGAAAAGTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCa > 2:885990/1‑150 (MQ=255) ggAAAAGTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGc > 1:1934546/1‑150 (MQ=255) ggAAAAGTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGc > 2:797746/1‑150 (MQ=255) gAAAAGTATTGCTCGGCTTCGATCATGATCGCGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGTGTGAACCCGCTCCCACCCGCGGcc > 2:374584/1‑150 (MQ=255) aaaGTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCAc > 1:566394/1‑140 (MQ=255) aaaGTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCAc < 2:566394/140‑1 (MQ=255) aaGTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCgg < 2:407140/150‑1 (MQ=255) gTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGc < 2:1283001/150‑1 (MQ=255) aTTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGa < 1:885990/150‑1 (MQ=255) ttGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACACGCGGCCCGGGCGAg > 1:668599/1‑150 (MQ=255) cTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGttt > 2:2031583/1‑150 (MQ=255) cTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGAGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCGCCCACCCGCGGCCCGGGCGAGttt > 2:1210939/1‑150 (MQ=255) ccGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCAAAGGGTATAAAGTAAAAGCTTTGGATAAAAGCGGAAAGGTTGGGGTGGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTc > 1:2123155/2‑150 (MQ=255) cTTCGACCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGtt < 1:116491/150‑1 (MQ=255) ttCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTg > 2:869724/1‑150 (MQ=255) aTGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAGGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAggg < 2:2173935/150‑1 (MQ=255) gCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGcc < 1:566917/150‑1 (MQ=255) tCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCgg > 1:1702188/1‑150 (MQ=255) aGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGGTTTGCAGCCCTTGTGGAAGCGGGTGAACCGGCTGCCGCCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAg < 2:1387208/150‑1 (MQ=255) cGTGCCGGGGTTGAGACTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAggg < 1:1633726/150‑1 (MQ=255) cGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGt > 2:745759/1‑121 (MQ=255) cGGGGTTGAGATTACCCATGGCTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGt < 1:745759/121‑1 (MQ=255) gTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCa > 2:991649/1‑150 (MQ=255) gTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCa > 1:637284/1‑150 (MQ=255) ttGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCaa > 1:1027583/1‑150 (MQ=255) tACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGc < 2:1934546/150‑1 (MQ=255) ccATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGa > 2:1334258/1‑150 (MQ=255) ccATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGa > 1:401106/1‑150 (MQ=255) aTGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAAcc > 2:1382646/1‑140 (MQ=255) aTGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAAcc < 1:1382646/140‑1 (MQ=255) tGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAgg > 2:291507/1‑149 (MQ=255) gTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACgg < 1:803084/150‑1 (MQ=255) aaTCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGG‑AGCGGGTTCACCCGCTTCCAcaa < 2:1824716/78‑3 (MQ=25) aaTCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGG‑AGCGGGTTCACCCGCTTCCAcaa > 1:1824716/1‑76 (MQ=25) aTCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTa > 1:381162/1‑150 (MQ=255) tAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAgcgc > 1:764663/1‑150 (MQ=255) gagCTGCGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCt < 1:991649/150‑1 (MQ=255) gCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCGGGGCGAGTTTCAGTGGCTCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTgg < 1:291507/150‑1 (MQ=255) cTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGc > 1:1425794/1‑150 (MQ=255) gTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCaa < 1:1466044/150‑1 (MQ=255) ttAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAAc < 1:554365/150‑1 (MQ=255) aaGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCg < 2:637284/150‑1 (MQ=255) gCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAATTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTc > 2:873163/1‑150 (MQ=255) gCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGAGAGGTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTc > 2:697742/1‑150 (MQ=255) tGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTccc > 2:1447265/1‑150 (MQ=255) cGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCttt < 1:869724/150‑1 (MQ=255) gggCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTg < 1:544910/150‑1 (MQ=255) gggCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTg < 1:2031583/150‑1 (MQ=255) ccGCTTTGCAGCCCTTGTGGAAGCGGGTGAANCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGa < 1:597087/79‑1 (MQ=255) ccGCTGTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGa > 2:597087/1‑79 (MQ=255) cGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTaa < 2:2373747/150‑1 (MQ=255) cTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTgg < 1:339364/121‑1 (MQ=255) cTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTgg > 2:339364/1‑121 (MQ=255) cTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAAc > 1:1686441/1‑150 (MQ=255) tttGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTg < 1:1049327/143‑1 (MQ=255) tttGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTg > 2:1049327/1‑143 (MQ=255) ttGCAGCCCTTGTGGAAGCGGGTTTACTCGCTTCCACCCGCGGCCGGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTTAACCGCTCCCGGCGCTTTTGGTAACCCa < 2:416798/150‑1 (MQ=255) gCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAgg < 2:83427/150‑1 (MQ=255) cAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGc > 1:1284215/1‑150 (MQ=255) ttGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAgg < 1:904128/143‑1 (MQ=255) ttGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAgg > 2:904128/1‑143 (MQ=255) ttGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGcc < 2:2123155/150‑1 (MQ=255) tgGGAGCGGGTTCACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGa > 2:236090/1‑150 (MQ=255) ggaGCGGGTTCACCCGCTTCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGctt < 1:122063/91‑1 (MQ=255) ggaGCGGGTTCACCCGCTTCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGctt > 2:122063/3‑93 (MQ=255) gAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATa > 1:1726352/1‑150 (MQ=255) gAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATa > 2:426938/1‑150 (MQ=255) aaGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTACACCAACCCGAGCCAGATaa > 2:2274798/1‑150 (MQ=255) gCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCGGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCCACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAAcc > 2:122633/1‑150 (MQ=255) gCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAAcc < 2:1686441/150‑1 (MQ=255) cGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAAccc < 2:1027583/150‑1 (MQ=255) aaCCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGcc < 1:2290390/150‑1 (MQ=255) cccGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCg > 1:2192610/1‑150 (MQ=255) ccGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGCACGCCTTCGCCAC‑CCGTGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGa > 1:1615473/1‑150 (MQ=255) ccGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTg < 2:2283876/91‑1 (MQ=255) ccGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTg > 1:2283876/1‑91 (MQ=255) ccGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCgg < 1:1945106/107‑1 (MQ=255) ccGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCgg > 2:1945106/1‑107 (MQ=255) ccGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTgg < 1:1973578/116‑1 (MQ=255) ccGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTgg > 2:1973578/1‑116 (MQ=255) ccGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGa > 2:2255597/1‑150 (MQ=255) ccGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGa > 1:1162852/1‑150 (MQ=255) ccGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGa > 1:1768026/1‑150 (MQ=255) ccGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCAGa > 1:129141/1‑150 (MQ=255) gCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATc < 2:1425794/150‑1 (MQ=255) gCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATc < 2:668599/150‑1 (MQ=255) tCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAATCCCCAGCCCGATCAt > 1:2078700/1‑150 (MQ=255) tCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCAt > 1:1608746/1‑150 (MQ=255) cccACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCGCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATg < 2:2168386/150‑1 (MQ=255) cccACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATg < 2:1284215/150‑1 (MQ=255) | CTGTCGGCGGAAAAGTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAG‑ACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATG > NC_002947/513877‑514172 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |