Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 6,072,960 G→A 8.0% P451L (CCG→CTG)  PP_5327 ← phosphate ABC transporter permease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029476,072,9600GA 8.0% 290.0 / 9.5 103P451L (CCG→CTG) PP_5327phosphate ABC transporter permease
Reads supporting (aligned to +/- strand):  ref base G (50/44);  new base A (3/6);  total (53/50)
Fisher's exact test for biased strand distribution p-value = 3.10e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 104 total aligned reads displayed.

GTGCATGATCTTCTGGTCCAGGTGCAGGTACGGGTAGTTTCCATCCACCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTCACGCACGGTGCGCGGAATTCGCGCCAGGCCTTCTTCGGTGGCCACGATCACCACCGGTACCGCCAGCAATGCCAGGGT  >  NC_002947/6072812‑6073108
                                                                                                                                                    |                                                                                                                                                     
gTGCATGATCTTCTGGTCCAGGTGCAGGTACGGGTAGTTTCCATCCACCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCgg                                                                                                                                                      <  1:1294401/150‑1 (MQ=255)
     tGATCTTCTGGTCCAGGTGCAGGTACGGGTAGTTTCCATCCACCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGTTTCGCAGCGAGGATCATGCCGGTCATCATGGCCGGGCTgg                                                                                                                                                 >  1:22961/1‑150 (MQ=255)
        tcttctGGTCCAGGTGCAGGTACGGGTAGTTTCCATCCACCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCa                                                                                                                                             >  2:997346/1‑150 (MQ=255)
           tctGGTCCAGGTGCAGGTACGGGTAGTTTCCATCCACCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATgg                                                                                                                                          <  2:961112/150‑1 (MQ=255)
           tctGGTCCAGGTGCAGGTACGGGTAGTTTCCATCCACCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATgg                                                                                                                                          <  1:1586140/150‑1 (MQ=255)
              ggTCCAGGTGCAGGTACGGGTAGTTTCCATCCACCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCa                                                                                                                                       <  1:924460/150‑1 (MQ=255)
              ggTCCAGGTGCAGGTACGGGTAGTTTCCATCCACCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGCCACGGGCCACAGCGAGGATCCTGCCGGTCACCATGGCCAGCCCGGCCATgatga                                                                                                                                       <  2:1727510/150‑5 (MQ=255)
              ggTCCAGGTGCAGGTACGGGTAGTTTCCATCCACCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATACGCGTCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCACCATGGCCAGCCCGGCCATgatga                                                                                                                                       <  2:1661888/150‑5 (MQ=255)
              ggTCCAGGTGCAGGTACGGGTAGTTTCCATCCACCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCACCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCACCATGGCCAGCCCGGCCATgatga                                                                                                                                       <  2:1662080/150‑5 (MQ=255)
                tCCAGGTGCAGGTACGGGTAGTTTCCATCCACCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAgg                                                                                                                                     >  1:1508911/1‑150 (MQ=255)
                 ccAGGTGCAGGTACGGGTAGTTTCCATCCACCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCAGCCCGGCCATgatgaccg                                                                                                                                    <  1:1470434/150‑8 (MQ=255)
                  cAGGTGCAGGTACGGGTAGTTTCCATCCACCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGAc                                                                                                                                   >  1:583600/1‑150 (MQ=255)
                        cAGGTACGGGTAGTTTCCATCCACCGGCAGCGACGGCGCCAGCTTCACCACTCCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGAtttt                                                                                                                             <  2:583600/150‑1 (MQ=255)
                           gTACGGGTAGTTTCCATCCACCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCca                                                                                                                          >  1:1102481/1‑150 (MQ=255)
                           gTACGGGTAGTTTCCATCCACCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCca                                                                                                                          <  1:705258/150‑1 (MQ=255)
                           gTACGGGTAGTTTCCATCCACCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCca                                                                                                                          >  1:1988658/1‑150 (MQ=255)
                           gTACGGGTAGTTTCCATCCACCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCca                                                                                                                          >  1:1714374/1‑150 (MQ=255)
                             aCGGGTAGTTTCCATCCACCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCcaca                                                                                                                        <  2:493428/150‑1 (MQ=255)
                               gggTAGTTTCCATCCACCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGACCGGCGCCCGAGCGAGGATCATGCCGGTCATCATGGCCAGCCTGACCATGGGCAGGACGATTTTCCACAgg                                                                                                                      >  1:644368/1‑150 (MQ=255)
                                ggTAGTTTCCATCCACCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAggg                                                                                                                     >  2:2176712/1‑150 (MQ=255)
                                 gTAGTTTCCATCCACCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGt                                                                                                                    >  2:214138/1‑150 (MQ=255)
                                     tttCCATCCACCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCg                                                                                                                >  1:1247889/1‑150 (MQ=255)
                                        ccatccaCCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGTGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGca                                                                                                             <  2:1304658/150‑2 (MQ=255)
                                          atccaCCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCAt                                                                                                                                            <  1:2345812/117‑1 (MQ=255)
                                          atccaCCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCAt                                                                                                                                            >  2:2345812/1‑117 (MQ=255)
                                          atccaCCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCtt                                                                                                           >  1:1677065/1‑150 (MQ=255)
                                          atccaCCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCtt                                                                                                           >  1:130547/1‑150 (MQ=255)
                                           tccaCCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCAGCCCGGCCATgat                                                                                                                                         <  2:1181339/119‑3 (MQ=255)
                                           tccaCCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCAGCCCGGCCATgat                                                                                                                                         >  1:1181339/1‑117 (MQ=255)
                                           taaaCCGGCAGCGAAGCGGCCCACATCAACACAACTACCAACATCAGCTTCACCTCGACGTCCCCAGCCCTGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGCGCTGGCCATCGGCAGGACGCTTTTCCACACGGTCCCCGCCCTg                                                                                                          >  2:983345/4‑150 (MQ=255)
                                             caCCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGt                                                                                                        >  1:2382349/1‑150 (MQ=255)
                                             caCCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATAGCCGGGCTGGCCATGGGCAGGACGATTTTCcaca                                                                                                                        <  1:204893/134‑1 (MQ=255)
                                             caCCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCAACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGt                                                                                                        >  1:2382468/1‑150 (MQ=255)
                                              aCCGGCAGCGACGGCGCCAGCTTCACCACACCAAACAACATAATGGTCGGTACCTGGCGTTCGGCACGGGCAAAAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGtt                                                                                                       <  1:1116685/150‑1 (MQ=255)
                                                cGGCAGCGACGGCGCCAGCCGCACCACCTCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTgc                                                                                                     <  1:988989/150‑1 (MQ=255)
                                                  gCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCa                                                                                                                                       >  1:684880/1‑114 (MQ=255)
                                                  gCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCa                                                                                                                                       <  2:684880/114‑1 (MQ=255)
                                                    aGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGAAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGccc                                                                                                 <  1:2133626/150‑1 (MQ=255)
                                                           gcgcCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCa                                                                                          <  1:217574/150‑1 (MQ=255)
                                                             gcCAGCTTCACCACACCTACCAGCATCAGCGGCGCCGCTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGc                                                                                        >  2:836546/1‑150 (MQ=255)
                                                             gcCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCacc                                                                                        >  1:1215373/1‑148 (MQ=255)
                                                             gcCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGc                                                                                        <  1:997346/150‑1 (MQ=255)
                                                             gcCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGc                                                                                        >  1:1595973/1‑150 (MQ=255)
                                                             gcCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGc                                                                                        <  2:1988658/150‑1 (MQ=255)
                                                             gcCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGGCTCGGCCTTGGTTGCGCCCAACGCCAGc                                                                                        >  1:2263417/1‑150 (MQ=255)
                                                               cAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTc                                                                                                                            <  1:2383574/112‑1 (MQ=255)
                                                               cAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTc                                                                                                                            >  2:2383574/1‑112 (MQ=255)
                                                                 gCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGc                                                                                    <  2:606201/150‑1 (MQ=255)
                                                                   ttcaatacacCTACCAGCTTCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCt                                                                                  >  2:1912161/7‑150 (MQ=255)
                                                                   ttCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCt                                                                                  >  1:2413825/1‑150 (MQ=255)
                                                                   ttCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCt                                                                                  >  2:922962/1‑150 (MQ=255)
                                                                      accacACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTca                                                                               <  2:1247889/150‑1 (MQ=255)
                                                                       ccacACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTcac                                                                              >  1:2421909/1‑150 (MQ=255)
                                                                       ccacACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTcac                                                                              >  2:1386604/1‑150 (MQ=255)
                                                                        cacaCCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAg                                                                                     >  2:1712283/1‑142 (MQ=255)
                                                                        cacaCCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAg                                                                                     <  1:1712283/142‑1 (MQ=255)
                                                                         acacCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACCGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTcacgc                                                                            >  1:651433/1‑150 (MQ=255)
                                                                         acacCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATgg                                                                                                                                          >  2:2105321/1‑88 (MQ=255)
                                                                         acacCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATgg                                                                                                                                          <  1:2105321/88‑1 (MQ=255)
                                                                             cTACCAGCATCAGCGGCGCCACTTCGACGCCGACACGAACCACAGCGACGATCATGGCGCTCATCATGTCGAGACTGCCACCCCGGTGCTGTACTACCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGTGCCGTCACGCACgg                                                                        >  1:543945/1‑150 (MQ=255)
                                                                              tACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTCACGCACGGt                                                                       >  1:376345/1‑150 (MQ=255)
                                                                                ccANCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTCACGCACGGTgc                                                                     >  2:1499531/1‑150 (MQ=255)
                                                                                  aGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTCACGCACGGTgcgc                                                                   >  2:2171129/1‑150 (MQ=255)
                                                                                  aGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTCACGCACGGTgcgc                                                                   <  2:1595973/150‑1 (MQ=255)
                                                                                       cAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTCACGCACGGTGCGCGGAAt                                                              <  1:1912161/150‑1 (MQ=255)
                                                                                         gcggcgCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTCACGCACGGTGCGCGGAATTc                                                            <  2:376345/150‑1 (MQ=255)
                                                                                           ggcgCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTCACGCACGGTGCGCGGAATTcgc                                                          <  1:495499/150‑1 (MQ=255)
                                                                                            gagcCACTTCGCTGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTCACGCACGGTGCGCGGAATTcgcg                                                         <  1:983345/148‑1 (MQ=255)
                                                                                             cgcCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTCACGCCCGGTGCGCGGAATTCgcgc                                                        >  2:747790/1‑150 (MQ=255)
                                                                                                cACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTCACGCACGGTGCGCGGAATTCGCGCCAg                                                     >  2:749925/1‑150 (MQ=255)
                                                                                                 aCTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATgg                                                                                                                                          <  1:999326/64‑1 (MQ=255)
                                                                                                  cTTCGGCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTCACGCACGGTGCGCGGAATTCGCGCCAGGc                                                   <  2:984727/150‑1 (MQ=255)
                                                                                                   ttCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTcacgcac                                                                          <  1:1837118/126‑1 (MQ=255)
                                                                                                   ttCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTcacgcac                                                                          >  2:1837118/1‑126 (MQ=255)
                                                                                                      gCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTCACGCACGGTGCGCGGAATTCGCGCCAGGCcttc                                               <  1:922962/150‑1 (MQ=255)
                                                                                                         ggcggcACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTCACGCACGGTGCGCGGAATTCGCGCCAGGCCttcttc                                            <  1:2171129/150‑1 (MQ=255)
                                                                                                         ggcggcACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTCACGCACGGTGCGCGGAATTCGCGCCAGGCCttcttc                                            <  2:130547/150‑1 (MQ=255)
                                                                                                          gcggcACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTCACGCACGGTGCGCGGAATTCGCGCCAGGCCTTCTTCg                                           >  2:558997/1‑150 (MQ=255)
                                                                                                             gcACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCGAGCGAGCCTTCACGCACGGTGCGCGGAATTCGCGCCAGGCCTTCTTCGGTg                                        <  1:171221/150‑1 (MQ=255)
                                                                                                             gcACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTCACGCACGGTGCGCGGAATTCGCGCCAGGCCTTCTTCGGTg                                        >  1:1123514/1‑150 (MQ=255)
                                                                                                             gcACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTCACGCACGGTGCGCGGAATTCGCGCCAGGCCTTCTTCGGTg                                        <  2:2413825/150‑1 (MQ=255)
                                                                                                                 gggCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTCACGCACGGTGCGCGGAATTCGCGCCAGGCCTTCTTCGGTGGCCa                                    >  1:7845/1‑150 (MQ=255)
                                                                                                                              gATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGATCCTTAACGCACGTTGCGCGGAATTCgcgc                                                        <  2:1076742/117‑1 (MQ=255)
                                                                                                                              gATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTCACGCACGGTGCGCGGAATTCGCGCCAGGCCTTCTTCGGTGGCCACGATCACCACCgg                       >  1:1447632/1‑150 (MQ=255)
                                                                                                                              gATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTAACGCACGGTGCGCGGAATTCgcgc                                                        >  1:1076742/1‑117 (MQ=255)
                                                                                                                                  aTGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTg                                                                                                          <  2:935499/63‑1 (MQ=255)
                                                                                                                                  aTGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTg                                                                                                          >  1:935499/1‑63 (MQ=255)
                                                                                                                                  aTGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTCACGCACGGTGCGCGGAATTCGCGCCAGGCCTTCTTCGGTGGCCACGATCACCACCGGNAcc                   <  2:1508911/150‑1 (MQ=255)
                                                                                                                                   tGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTCACGCACGGTGCGCGGAATTCGCGCCAGGCCTTCTTCGGTGGCCACGATCACCACCGGTACCg                  >  1:2098499/1‑150 (MQ=255)
                                                                                                                                    gCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTCACGCACGGTGCGCGGAATTCGCGCCAGGCCTTCTTCGGTGGCCACGATCACCACCGGTACCGc                 <  1:2162856/150‑1 (MQ=255)
                                                                                                                                      cGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTCACGCACGGTGCGCGGAATTCGCGCCAGGCCTTCTTCGGTGGCCACGATCACCACCGGTACCGCCa               <  1:1499531/150‑1 (MQ=255)
                                                                                                                                       ggTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTCACGCACGGTGCGCGGAATTCGCGCCAGGCCTTCTTCGGTGGCCACGATCACCACCGGTACCGCCAg              <  2:644368/150‑1 (MQ=255)
                                                                                                                                       ggTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTCACGCACGGTGCGCGGAATTCGCGCCAGGCCTTCTTCGGTGGCCACGATCACCACCGGTACCGCCAg              >  2:1438336/1‑150 (MQ=255)
                                                                                                                                            ccatGGCCAGCCCGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTCACGCACGGTGCGCGGAATTCGCGCCAGGCCTTCTTCGGTGGCCACGATCACCACCGGTACCGCCa               <  2:1232818/143‑1 (MQ=255)
                                                                                                                                                ggCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTgc                                                                                                     <  2:2329848/54‑1 (MQ=255)
                                                                                                                                                ggCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTgc                                                                                                     >  1:2329848/1‑54 (MQ=255)
                                                                                                                                                 gCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTCACGCACGGTGCGCGGAATTCGCGCCAGGCCTTCTTCGGTGGCCACGATCACCACCGGTACCGCCAGCAATGCCAgg    >  1:2305153/1‑150 (MQ=255)
                                                                                                                                                   cGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTCACGCACGGTGCGCGGAATTCGCGCCAGGCCTTCTTCGGTGGCCACGATCACCACCGGTACCGCCAGCAATGc        >  2:88387/1‑144 (MQ=255)
                                                                                                                                                   cGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTCACGCACGGTGCGCGGAATTCGCGCCAGGCCTTCTTCGGTGGCCACGATCACCACCGGTACCGCCAGCAATGc        <  1:88387/144‑1 (MQ=255)
                                                                                                                                                   cGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTCACGCACGGTGCGCGGAATTCGCGCCAGGCCTTCTTCGGTGGCCACGATCACCACCGGTACCGCCAGCAATGCCAGGGt  <  1:1544387/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
GTGCATGATCTTCTGGTCCAGGTGCAGGTACGGGTAGTTTCCATCCACCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCGAGGATCATGCCGGTCATCATGGCCGGGCTGGCCATGGGCAGGACGATTTTCCACAGGGTCTCGGCCTTGGTTGCGCCCAACGCCAGCGAGCCTTCACGCACGGTGCGCGGAATTCGCGCCAGGCCTTCTTCGGTGGCCACGATCACCACCGGTACCGCCAGCAATGCCAGGGT  >  NC_002947/6072812‑6073108

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: