| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 537,193 | C→T | 5.6% | Q52* (CAG→TAG) | rplL → | 50S ribosomal protein L7/L12 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 537,193 | 0 | C | T | 5.6% | 288.6 / 2.9 | 98 | Q52* (CAG→TAG) | rplL | 50S ribosomal protein L7/L12 |
| Reads supporting (aligned to +/- strand): ref base C (43/48); new base T (3/3); total (47/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCTGACTAACGAACAAATCATCGAAGCAATCGGCCAGAAAACCGTTCTGGAAGTTGTTGAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTGGGCCTGAAAGAAGCCAAAGAGAAAGTCGATGGCGCTCCTCAGGTTGTAGCTGAAGGCGTTTC > NC_002947/537045‑537338 | tctGACTAACGAACAAATCATCGAAGCAATCGGCCAGAAAACCGTTCTGGAAGTTGTTGAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCa > 2:1640157/1‑150 (MQ=255) tGACTAACGAACAAATCATCGAAGCAATCGGCCAGAAAACCGTTCTGGAAGTTGTTGAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGa < 2:1826157/150‑1 (MQ=255) aCTAACGAACAAATCATCGAAGCAATCGGCCAGAAAACCGTTCTGGAAGTTGTTGAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGAcc > 2:646840/1‑150 (MQ=255) tAACGAACAAATCATCGAAGCAATCGGCCAGAAAACCGTTCTGGAAGTTGTTGAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGa > 2:954594/1‑150 (MQ=255) aCGAACAAATCATCGAAGCAATCGGCCAGAAAACCGTTCTGGAAGTTGTTGAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGt < 2:579957/150‑1 (MQ=255) aCGAACAAATCATCGAAGCAATCGGCCAGAAAACCGTTCTGGAAGTTGTTGAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGt > 2:367955/1‑150 (MQ=255) gAACAAATCATCGAAGCAATCGGCCAGAAAACCGTTCTGGAAGTTGTTGAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGc > 1:2397448/1‑139 (MQ=255) gAACAAATCATCGAAGCAATCGGCCAGAAAACCGTTCTGGAAGTTGTTGAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGc < 2:2397448/139‑1 (MQ=255) cAAATCATCGAAGCAATCGGCCAGAAACCCGTTCTGGAAGTTGTTGAGCTGATACTAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAAc < 2:2343147/150‑1 (MQ=255) cAAATCATCGAAGCAATCGGCCAGAAAACCGTTCTGGAAGTTGTTGAGCTGATCAAAGCAATGGAAGAAACCTTCGGCCCAACCCCTGCTTACTGCCG‑GCCATACCCGTCTCCTCCCCCTGGCTTTGTTG‑AAGAGCAGACCGAGTTCAAc < 1:646840/150‑1 (MQ=255) atcatcGAAGCAATCGGCCAGAAAACCGTTCTGGAAGTTGTTGAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACgtt < 2:1062088/150‑1 (MQ=255) atcatcGAAGCAATCGGCCAGAAAACCGTTCTGGAAGTTGTTGAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACgtt > 2:173168/1‑150 (MQ=255) atcatcGAAGCAATCGGCCAGAAAACCGTTCTGGAAGTTGTTGAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACgtt > 1:1646421/1‑150 (MQ=255) catcGAAGCAATCGGCCAGAAAACCGTTCTGGAAGTTGTTGAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACgttgt < 1:173168/150‑1 (MQ=255) atcGAAGCAATCGGCCAGAAAACCGTTCTGGAAGTTGTTGAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACgttgtt > 2:1840024/1‑150 (MQ=255) tcGAAGCAATCGGCCAGAAAACCGTTCTGGAAGTTGTTGAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTATCGCTGC‑TGTTGCCGATGCTGGAAGAGCACACGCGTGTGCTGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTc > 1:1116073/1‑150 (MQ=255) tcGAAGCAATCGGCCAGAAAACCGTTCTGGAAGTTGTTGAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCa > 2:2264299/1‑130 (MQ=255) tcGAAGCAATCGGCCAGAAAACCGTTCTGGAAGTTGTTGAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCa < 1:2264299/130‑1 (MQ=255) gCAATCGGCCAGAAAACCGTTCTGGAAGTTGTTGAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGtt < 1:1831544/150‑1 (MQ=255) aaTCGGCCAGAAAACCGTTCTGGAAGTTGTTGAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACgttgtt > 1:1830948/1‑142 (MQ=255) aaTCGGCCAGAAAACCGTTCTGGAAGTTGTTGAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACgttgtt < 2:1830948/142‑1 (MQ=255) gCCAGAAAACCGTTCTGGAAGTTGTTGAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCg > 2:389925/1‑150 (MQ=255) cAGAAAACCGTTCTGGAAGTTGTTGAGCTGATCAAAGCAATGGAAGAAACCTTCGGAGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGc > 1:363450/1‑150 (MQ=255) gAAAACCGTTCTGGAAGTTGTTGAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑ACCGGTGGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGa > 1:625196/1‑150 (MQ=255) cGTTCTGGAAGTTGTTGAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGaa > 2:1334253/1‑150 (MQ=255) cGTTCTGGAAGTTGTTGAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGaa > 2:1334004/1‑150 (MQ=255) gTTCTGGAAGTTGTTGAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGaaa > 1:278913/1‑150 (MQ=255) gTTCTGGAAGTTGTTGAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGaaa < 2:719293/150‑1 (MQ=255) gTTCTGGAAGTTGTTGAGCTGATCAAAGCAATGGAAGAAACCTCCGGCTGTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGaaa < 1:2090547/150‑1 (MQ=255) ttCTGGAAGTTGTTGAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAg > 2:1559741/1‑150 (MQ=255) gttgttGAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACgt > 2:1871303/1‑113 (MQ=255) gttgttGAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACgt < 1:1871303/113‑1 (MQ=255) tgttgAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGAt < 1:208160/150‑1 (MQ=255) tgttgAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGAt < 1:2326068/150‑1 (MQ=255) gttgAGCTGCTCAAAGCAATGAAAGAAACCTGCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTCGCGGGAGAAGTGCGAGAT‑AAC‑AAGTGCGTCGTTTAAGGCGGCGACAAGAAAGTGAACGTGATc > 2:2367790/1‑150 (MQ=255) tgAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCaa < 2:278913/150‑1 (MQ=255) gAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGtt < 2:1808277/117‑1 (MQ=255) gAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGtg > 1:1808277/1‑116 (MQ=255) aGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTTCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAgg < 1:1192903/150‑1 (MQ=255) aGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTTCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAgg < 1:1191844/150‑1 (MQ=255) cTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGTAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAAc > 2:1824306/1‑138 (MQ=255) cTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGTAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAAc < 1:1824306/138‑1 (MQ=255) cTGACCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGTAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAAc > 2:1824543/1‑138 (MQ=255) cTGACCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGTAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAAc < 1:1824543/138‑1 (MQ=255) tGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCg > 1:423422/1‑150 (MQ=255) aTCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGtt > 2:962498/1‑150 (MQ=255) aaaGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTcgc > 2:947998/1‑150 (MQ=255) aaGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTcgcg > 1:240183/1‑150 (MQ=255) aaGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCA‑‑‑GCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGagc < 2:1763033/150‑3 (MQ=255) gCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGaa < 1:1923481/150‑1 (MQ=255) aTGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTg > 2:2055876/1‑150 (MQ=255) ggAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGAc < 1:1559741/150‑1 (MQ=255) aagaaACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCg > 1:919784/1‑150 (MQ=255) agaaACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCgg > 2:1791472/1‑150 (MQ=255) ccTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGAGAACTGACCGGTCTgg < 2:635905/150‑1 (MQ=255) cTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTggg < 1:947998/150‑1 (MQ=255) cGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGtt > 2:2295686/1‑124 (MQ=255) cGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGtt < 1:2295686/124‑1 (MQ=255) cGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTGGGCCTGaa < 2:340557/150‑1 (MQ=255) gTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTGGGCCTGaaa > 1:1280284/1‑150 (MQ=255) cGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCACAGTTTGTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTGGGCCTGAAAGAAGc < 1:1334004/150‑1 (MQ=255) cGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTGGGCCTGAAAGAAGc < 1:1334253/150‑1 (MQ=255) gctgc‑tGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAAAGTGGTCAAGGCCGTTCGCGAACTGACCGGTCTGGGCCTGAAAGAAGcc > 1:259217/1‑150 (MQ=255) gc‑tgTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑CCGTGTGGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTGGGCCTGAAAGAAGCCaaa < 1:1452054/150‑1 (MQ=255) gc‑tgTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTGGGCCTGAAAGAAGCCaaa < 2:423422/150‑1 (MQ=255) tgTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCGGCCCGTGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTGGGCCTGAAAGAAGCCAAaga < 1:2367790/150‑1 (MQ=255) gTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCaa < 2:729670/104‑1 (MQ=255) gTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCaa > 1:729670/1‑104 (MQ=255) ttGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTGAGCCTTAAAGAAGCCAAAgaga > 1:721735/1‑150 (MQ=255) gCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTGGGCCTGAAAGAAGCCAAAGAGaaa < 2:1646421/150‑1 (MQ=255) gCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTGGGCCTGAAAGAAGCCAAAGAGaaa < 1:1840024/150‑1 (MQ=255) cGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTGGGCCTGAAAGAAGCCAAAGAGAAAGt < 2:1116073/150‑1 (MQ=255) tgctgGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTg > 1:1593260/1‑121 (MQ=255) tgctgGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTg < 2:1593260/121‑1 (MQ=255) cccAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTGGGCCTGAAAGAAGCCAAAGAGAAAGTCGATgg > 1:2284867/1‑147 (MQ=255) cccAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTGGGCCTGAAAGAAGCCAAAGAGAAAGTCGATgg < 2:2284867/147‑1 (MQ=255) cAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAgg > 2:1029879/1‑90 (MQ=255) cAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAgg < 1:1029879/90‑1 (MQ=255) ctgctgctgctgCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTGGGCCTGAAAGAAGCCAAAGAGAAAGTCGATGGCGctcctc > 2:295304/1‑150 (MQ=255) gctgctgctgcCGTTGTTG‑AAGAGCAGACCGAGTTTAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTGGGCCTGAAAGAAGCCAAAGAGAAAGTCGATGGCGCTCCTCAg < 1:246212/150‑1 (MQ=255) gctgctgctgcCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTGGGCCTGAAAGAAGCCAAAGAGAAAGTCGATGGCGCTCCTCAg > 1:1121843/1‑150 (MQ=255) ctgctgctgcCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTGGGCCTGAAAGAAGCCAAAGAGAAAGTCGATGGCGCTCCTCAgg < 1:367955/150‑1 (MQ=255) tgctgcCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTGGGc < 2:867284/106‑1 (MQ=255) tgctgcCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTGGGc > 1:867284/1‑106 (MQ=255) tgctgcCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTGGGCCTGAAAGAAGCCAAAGAGAAAGTCGATGGCGCTCCTCAGGTTGt > 2:2292948/1‑150 (MQ=255) tgctgcCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTGGGCCTGAAAGAAGCCAAAGAGAAAGTCGATGGCGCTCCTCAGGTTGt < 1:389925/150‑1 (MQ=255) ctgcCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTGGGCCTGAAAGAAGCCAAAGAGAAAGTCGATGGCGCTCCTCAGGTTGTAg > 1:1669207/1‑150 (MQ=255) tgcCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTGGGCCTGAAAGAAGCCAAAGAGAAAGTCGATGGCGCTCCTCAGGTTGTAGc > 2:192954/1‑150 (MQ=255) tgcCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTGGGCCTGAAAGAAGCCAAAGAGAAAGTCGATGGCGCTCCTCAGGTTGTAGc > 1:857247/1‑150 (MQ=255) ccGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTgg < 2:2077753/99‑1 (MQ=255) ccGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTgg > 1:2077753/1‑99 (MQ=255) gttgttG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTGGGCCTGAAAGAAGc < 2:892232/110‑1 (MQ=255) gttgttG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTGGGCCTGAAAGAAGc > 1:892232/1‑110 (MQ=255) gttgttG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTGGGCCTGAAAGAAGCCAAAGAGAAAGTCGATGGCGCTCCTCAGGTTGCACCTGaa < 2:1171873/150‑1 (MQ=255) ttgttg‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTGGGCCTGAAAGAAGCCAAAGAGAAAGTCGATGGCGCTCCTCAGGTTGTAGCTGAAg < 1:487704/150‑1 (MQ=255) ttgttg‑AAGAGCAGACCGAGTTCAACGTTGTTA‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACGGACCGGTCTGGGCCTGAAAGAAGCCAAAGAGAAAGTCGATGGCGCTCCTCAGGTTGTAGCTGAAg < 2:1117412/150‑1 (MQ=255) aaGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTGGGCCTGAAAGAAGCCAAAGAGAAAGACGATGGCGCTCCTCAGGTTGTAGCTGAAGGCGttt < 2:1280284/150‑1 (MQ=255) agagCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTGGGCCTGAAAGAAGCCAAAGAGAAAGTCGATGGCGCTCCTCAGGTTGTAGCTGAAGGCGTTTc < 1:2055876/150‑1 (MQ=255) gagCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTGGGCCTGAAAGAAGCCAAAGAGAAAGTCGATGGCGCTCCTCa > 1:1936131/1‑128 (MQ=255) gagCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTGGGCCTGAAAGAAGCCAAAGAGAAAGTCGATGGCGCTCCTCa < 2:1936131/128‑1 (MQ=255) | TCTGACTAACGAACAAATCATCGAAGCAATCGGCCAGAAAACCGTTCTGGAAGTTGTTGAGCTGATCAAAGCAATGGAAGAAACCTTCGGCGTTACCGCTGC‑TGTTGCCGCTGCTGGCCCAGCTGCTGCTGCTGCCGTTGTTG‑AAGAGCAGACCGAGTTCAACGTTGTTC‑TGGTTGAAGCCGGCGACAAGAAAGTGAACGTGATCAAGGCCGTTCGCGAACTGACCGGTCTGGGCCTGAAAGAAGCCAAAGAGAAAGTCGATGGCGCTCCTCAGGTTGTAGCTGAAGGCGTTTC > NC_002947/537045‑537338 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |