| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 537,582 | C→G | 6.2% | intergenic (+109/‑44) | PP_mr07 → / → rpoB | P26 ncRNA/DNA‑directed RNA polymerase subunit beta |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 537,582 | 0 | C | G | 6.2% | 297.4 / 9.8 | 99 | intergenic (+109/‑44) | PP_mr07/rpoB | P26 ncRNA/DNA‑directed RNA polymerase subunit beta |
| Reads supporting (aligned to +/- strand): ref base C (46/45); new base G (3/3); total (49/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.49e-01 | |||||||||||
Only 100 of 110 total aligned reads displayed.
TGAGCGAAAGGCTGATGGCTGGTGGCTTATGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATGGATGTGCCTTACCTCCTGGCCATCCAGCTGGATTCGTATC > NC_002947/537435‑537731 | tGAGCGAAAGGCTGATGGCTGGTGGCTTATGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCccgccg < 1:2443669/150‑1 (MQ=255) gAGCGAAAGGCTGATGGCTGGTGGCTTATGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCgg < 1:1037962/150‑1 (MQ=255) gAGCGAAAGGCTGATGGCTGGTGGCTTATGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCgg < 1:369023/150‑1 (MQ=255) gAGCGAAAGGCTGATGGCTGGTGGCTTATGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCgg < 2:600523/150‑1 (MQ=255) gAGCGAAAGGCTGATGGCTGGTGGCTTATGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGAGGTTTGCACGATTTTCTGGCTGCTCCCGCCgg < 1:911614/150‑1 (MQ=255) gCGAAAGGCTGATGGCTGGTGGCTTATGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGga < 2:2160092/150‑1 (MQ=255) cGAGAGGCTGATGGCTGGTGGCTTATGCCACCGGCCTTTTTCTTTTATTTGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGgag > 2:2292411/1‑150 (MQ=255) aaaGGCTGATGGCTGGTGGCTTATGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGTAGaa < 2:1912283/150‑1 (MQ=255) aaaGGCTGATGGCTGGTGGCTTATGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGaa < 1:2158781/150‑1 (MQ=255) aaaGGCTGATGGCTGGTGGCTTATGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGaa > 1:252745/1‑150 (MQ=255) aaaGGCTGATGGCTGGTGGCTTATGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGACGGGTGaa < 2:1912228/150‑1 (MQ=255) cTGATGGCTGGTGGCTTATGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCaa > 2:265462/1‑150 (MQ=255) tGGCTGGTGGCTTATGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACaa < 2:1058731/150‑1 (MQ=255) ggCTGGTGGCTTATGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAg > 2:881296/1‑150 (MQ=255) ggCCGGTGGCATAAGCCACCAGCCTTTTTCAGTTATTTGTGGCCGGTCAGGCCGGTCACGATAACGAGCTGCAAGACACGCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTTCTCCCACCGGGCGTAACCAAACGAg > 2:762999/1‑150 (MQ=255) gctgtgggCTTATGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCAGGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGc < 2:775601/144‑1 (MQ=255) tggtggCTTATGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAg > 2:2097029/1‑150 (MQ=255) cggtggCATAAGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAg > 2:891174/2‑150 (MQ=255) gtggCTTATGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGt < 1:2258679/150‑1 (MQ=255) tggCTTATGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTg > 2:370023/1‑150 (MQ=255) ttATGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGAcaa > 1:34016/1‑148 (MQ=255) cACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGTTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTgg < 1:2251632/150‑1 (MQ=255) cACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTgg < 1:370023/150‑1 (MQ=255) cACCGGCCTTTTTCAAAAATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTgg > 1:683418/1‑150 (MQ=255) aCCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTggg < 2:252745/150‑1 (MQ=255) aCCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGAACTGTTCCGTGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTggg < 2:683418/150‑1 (MQ=255) cGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCgg < 1:1176584/116‑1 (MQ=255) cGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCgg > 2:1176584/1‑116 (MQ=255) cGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGc > 2:1944732/1‑150 (MQ=255) gatATTGGTGGCCGGTCAGGCCGGTCTCGATAACGAGCTTCAACACACCCATTTGGATAGCGCAAAACAAGGGGTTTTCAATATTTTCTGGCTGCTCCCGCCCGGAGAAGCGAAAAAAGAAGGTGACCAAGCCTAGGAAAGCTGATGGCt > 2:363191/3‑150 (MQ=255) gTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTTCTCCCGGCGGGagcagc > 2:765023/1‑111 (MQ=255) gTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTTCTCCCGGCGGGagcagc < 1:765023/111‑1 (MQ=255) gTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTTCTCCCGGCGGGAGCAGcc > 2:1371811/1‑112 (MQ=255) gTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTTCTCCCGGCGGGAGCAGcc < 1:1371811/112‑1 (MQ=255) ggtggCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTc > 1:990257/1‑149 (MQ=255) ggtggCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCa < 2:2234965/150‑1 (MQ=255) gtggCCGGTCAGGCCGGTCCCGATAACGGGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCAt > 1:2412986/1‑150 (MQ=255) tggCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATa < 2:34016/150‑1 (MQ=255) cGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCACGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACt > 1:1142261/1‑150 (MQ=255) cGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCt > 2:1170338/1‑138 (MQ=255) cGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCt < 1:1170338/138‑1 (MQ=255) cGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACt > 1:1141974/1‑150 (MQ=255) gTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTga < 1:881296/150‑1 (MQ=255) gTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTga < 1:1997592/150‑1 (MQ=255) gTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTga < 1:952566/150‑1 (MQ=255) tCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTgag > 1:1082807/1‑150 (MQ=255) gCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTTCTCCCGGCGGgagca > 1:1167557/1‑88 (MQ=255) gCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTTCTCCCGGCGGgagca < 2:1167557/90‑3 (MQ=255) cGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGaaaaaa > 2:619109/1‑150 (MQ=255) tCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTCCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGt < 1:1132162/150‑1 (MQ=255) cGATAACGCGCTACACAACGCCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATc < 2:1879028/150‑1 (MQ=255) gAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTggg > 2:1650611/1‑102 (MQ=255) gAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTggg < 1:1650611/102‑1 (MQ=255) gCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATcc < 1:1904679/142‑1 (MQ=255) gCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATcc > 2:1904679/1‑142 (MQ=255) gCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACttt > 1:1501474/1‑150 (MQ=255) cAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTa > 2:2281939/1‑150 (MQ=255) cAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTa > 2:1723196/1‑150 (MQ=255) aaGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAg > 1:1823281/1‑150 (MQ=255) aGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGCATCCGCAAGGACTTTAGc > 2:1261829/1‑150 (MQ=255) gACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCa > 1:1912718/1‑150 (MQ=255) gACACCCATGTAGGTGGCGCAAACCAAGGGGTGTGCACGATTTTCTCGCTGCTACCGCCGGGAGAAGCCAAACGTGCAGGTGAACAACCTGGGGAAAGCTGGTGGCATACTCATACACTGAGAAAAAACGTATCCGCAAGGCCTTTAGCa > 2:76524/1‑150 (MQ=255) acacCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCaa < 1:1261829/150‑1 (MQ=255) cacCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAg < 2:1056444/150‑1 (MQ=255) acCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGt < 1:2153400/78‑1 (MQ=255) acCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGt > 2:2153400/1‑78 (MQ=255) acCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGt > 1:1942015/1‑150 (MQ=255) cccGTGTGGGTGGCGCAAACCAAGGGGTTTGAACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGtt < 2:1141974/150‑1 (MQ=255) cccATGTGGGGGGCGCAAACCAAGGGGTTTGCACGATTTGCTGGCTGCTCTCGTCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGtt < 2:1142261/150‑1 (MQ=255) gtgtgGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGcc > 1:2383762/2‑150 (MQ=255) aTGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACtt < 2:471698/138‑1 (MQ=255) aTGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGcc < 1:2097029/150‑1 (MQ=255) ggtggCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGaaaaa > 1:2248593/1‑115 (MQ=255) ggtggCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGaaaaa < 2:2248593/115‑1 (MQ=255) tggCGCAAACAAAGGGGTTTGCACGATTTTATGGCTGCTCGCTCCGGGAGAAGCCAAACAATCAGGTGACCAAGCTTGGGAACGCTGATGGCTTACTCATACACAGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTc > 2:626476/1‑150 (MQ=255) cgcAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATg < 2:1942015/150‑1 (MQ=255) cgcAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATg < 1:2292411/150‑1 (MQ=255) aaaCCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATGGAt < 1:891174/150‑1 (MQ=255) aaCCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCgg > 1:1475568/1‑40 (MQ=255) aaCCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCgg < 2:1475568/40‑1 (MQ=255) cACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATGGATGTGCCTTACCTCCTg > 1:769759/1‑150 (MQ=255) cACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATGGATGTGCCTTACCTCCTg < 2:1082807/150‑1 (MQ=255) aCGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTGCTCATACACTGAGAAAAAACGTATCAGCAATGGCGGTAGCAAGTGGCCGGACGTCATGGATGTGCCTTACCTCCTgg > 1:1741647/1‑150 (MQ=255) aCGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATGGATGTGCCTTACCTCNTgg < 2:1501474/150‑1 (MQ=255) aCGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATGGATGTGCCTTACCTCCTgg < 1:987818/150‑1 (MQ=255) gATTTTCTGGCTGCTCCCGCCGGGAGAAGCTAAACAAGCATGTGACCAAGCTGGGGAACGCTGATGGCtt < 2:1466135/70‑1 (MQ=255) gATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCtt > 1:1466135/1‑70 (MQ=255) gATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATGGATGTGCCTTACCTCCTGGcc > 1:429080/1‑150 (MQ=255) gATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATGGATGTGCCTTACCTCCTGGcc > 2:373475/1‑150 (MQ=255) cTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATGGATGTGCCTTACCTCCTGGCCATCCAg < 2:1612370/150‑1 (MQ=255) tgctCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATGGATGTGCCTTACCTCCTGGCCATCCAGCTGGa > 2:283128/1‑150 (MQ=255) tCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATGGATGTGCCTTACCTCCTGGCCATCCAGCTGGATTc > 1:2162986/1‑150 (MQ=255) cccGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATGGATGTGCCTTACCTCCTGGCCATCCAGCTGGATTCg < 1:265462/150‑1 (MQ=255) ccggcgGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGtt > 2:410373/1‑100 (MQ=255) ccgccgGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAAc > 2:1917581/1‑75 (MQ=255) ccgccgGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATGGATGTGCCTTACCTCCTGGCCATCCAGCTGGATTCGt > 1:418827/1‑150 (MQ=255) cgccgGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTAATCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATGGATGTGCCTTACCTCCTGGCCATCCAGCTGGATTCGTa > 1:1526952/1‑150 (MQ=255) gccgGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAAc < 1:1032962/73‑1 (MQ=255) gccgGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATGAATGTGCCTTTCCGCCGGTCCATCCAGCTGGATTCGtct > 2:980721/1‑148 (MQ=255) ccgGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCTTTTGCTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATGGATGTGCCTTACCTCCTGGCCATCCAGCTGGATTCGTATc < 1:626476/150‑1 (MQ=255) | TGAGCGAAAGGCTGATGGCTGGTGGCTTATGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATGGATGTGCCTTACCTCCTGGCCATCCAGCTGGATTCGTATC > NC_002947/537435‑537731 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |