Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 78,124 | C→T | 5.8% | A117T (GCC→ACC) | fmt ← | methionyl‑tRNA formyltransferase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 78,124 | 0 | C | T | 5.8% | 397.6 / 9.3 | 136 | A117T (GCC→ACC) | fmt | methionyl‑tRNA formyltransferase |
Reads supporting (aligned to +/- strand): ref base C (57/71); new base T (3/5); total (60/76) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.12e-01 |
Only 100 of 138 total aligned reads displayed.
CGTGCAAGGTGCCGCCGGTGTCCTCGGCGCTGATCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGTTTCAGTGCGGCCAGTTCGGCCTGCGCATCGGCA > NC_002947/77977‑78272 | cGTGCAAGGTGCCGCCGGTGTCCTCGGCGCTGATCGGGGTGACTACCTGGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCAc < 1:514798/150‑1 (MQ=255) tGCAAGGTGCCGCCGGTGTCCTCGGCGCTGATCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACcg < 2:1669639/150‑1 (MQ=255) aaGGTGCCGCCGGTGTCCTCGGCGCTGATCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCgcgc > 2:1269723/1‑150 (MQ=255) gTGCCGCCGGTGTCCTCGGCGCTGATCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGTGCCGCGccga < 1:396688/150‑3 (MQ=255) cgccgGTGTCCTCGGCGCTGATCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTg > 2:1948819/1‑150 (MQ=255) gccgGTGTCCTCGGCGCTGATCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTgg < 1:2370454/150‑1 (MQ=255) ccgGTGTCCTCGGCGCTGATCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCC‑CTATCTCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGgc < 1:413151/150‑1 (MQ=255) tgtCCTCGGCGCTGATCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGgcagca < 1:340268/150‑1 (MQ=255) tCCTCGGCGCTGATCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAgg > 1:648452/1‑150 (MQ=255) cTCGGCGCTGATCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCa > 2:2412433/1‑135 (MQ=255) cTCGGCGCTGATCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCa < 1:2412433/135‑1 (MQ=255) cTCGGCGCTGATCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGa > 2:2070313/1‑150 (MQ=255) cGGCGCTGATCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAg < 2:2067469/150‑1 (MQ=255) gcgcTGATCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCg < 2:1815995/150‑1 (MQ=255) cgcTGATCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGt < 2:27887/150‑1 (MQ=255) cTGATCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTgg < 1:2008882/134‑1 (MQ=255) cTGATCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTgg > 2:2008882/1‑134 (MQ=255) cTGATCGGGGTGACTAACTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTgg < 1:1945056/150‑1 (MQ=255) cTGAGCGGGGTGACTACCTCGAGCAGCAGCGGGCCGTTGGCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTgg < 1:1047217/150‑1 (MQ=255) aTCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTg > 2:1784344/1‑150 (MQ=255) gggTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGa < 1:1301530/150‑1 (MQ=255) gggTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGa < 1:1470154/150‑1 (MQ=255) ggTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTTGAGCTGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGAt < 1:435408/150‑1 (MQ=255) ggTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGAt < 2:2168493/150‑1 (MQ=255) tGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGc < 1:633703/150‑1 (MQ=255) aCTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCaa < 1:1026695/150‑1 (MQ=255) aCCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAAccc < 1:222146/150‑1 (MQ=255) cTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCAGCGCTCACAGCTACCTCGGCACG‑TTGGATCTGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAg < 1:288967/150‑1 (MQ=255) gcagcaTCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCATCAGGGAAGCGTGGCTGTTGATGCAACCCAGGcgcg < 2:1280903/150‑1 (MQ=255) cagcaTCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAAGCCAGGCGCgg > 1:296980/1‑150 (MQ=255) cagcaTCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCgg < 1:1381764/150‑1 (MQ=255) cagcaTCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCgg < 2:2002290/150‑1 (MQ=255) gcaTCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACGTCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGa < 1:169273/150‑1 (MQ=255) caTCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGat < 2:1390301/150‑1 (MQ=255) tCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGCCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCCGCatat > 2:619176/1‑150 (MQ=255) cGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATc < 2:1123414/150‑1 (MQ=255) cGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATc < 1:2070313/150‑1 (MQ=255) cGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATc < 2:215945/150‑1 (MQ=255) ggCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGTGCCGCGccga < 2:1023656/98‑3 (MQ=255) ggCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGGCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGTGCCGCGccga > 1:1023656/1‑96 (MQ=255) gCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCaa > 2:217765/1‑130 (MQ=255) gCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCaa < 1:217765/130‑1 (MQ=255) cGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGca > 1:355090/1‑150 (MQ=255) tCCAGGCCGGCCTCCAT‑GTGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCaccacc > 2:2286392/1‑150 (MQ=255) tCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGTTGTTGATGCAACCCAGGCGCGGGATATCCAGCaccacc > 2:2376399/1‑150 (MQ=255) ccAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATg > 1:1940023/1‑119 (MQ=255) ccAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCt < 2:1012209/150‑1 (MQ=255) cAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTg < 1:1308602/150‑1 (MQ=255) cAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTg > 2:802483/1‑150 (MQ=255) ggccggccTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTTGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTg < 1:1101895/90‑1 (MQ=255) ggccggccTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTTGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTg > 2:1101895/1‑90 (MQ=255) ggccggccTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCg < 2:2113551/150‑1 (MQ=255) cggccTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGgcagca > 1:736711/1‑93 (MQ=255) cggccTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGgcagca < 2:736711/93‑1 (MQ=255) cggccTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGa > 1:1709806/1‑129 (MQ=255) cggccTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGa < 2:1709806/129‑1 (MQ=255) cggccTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCCGCACCACCTGCGGCa > 2:873104/1‑150 (MQ=255) cggccTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCa > 2:1528927/1‑150 (MQ=255) ggccTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAg < 1:873104/150‑1 (MQ=255) cTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGAt > 1:1895405/1‑150 (MQ=255) cTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGAt > 2:287437/1‑150 (MQ=255) ccAT‑GCGCATCACGGTCACGCCGCTTTCGGCGGCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCa < 2:2195940/150‑1 (MQ=255) aT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAgg < 1:544888/150‑1 (MQ=255) gcgcATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGcc > 1:428643/1‑150 (MQ=255) cATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTa < 1:2191957/150‑1 (MQ=255) aTCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAg < 1:2432864/107‑1 (MQ=255) aTCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAg > 2:1397828/1‑150 (MQ=255) aTCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAg > 1:2372585/1‑150 (MQ=255) aTCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGAGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAg > 2:2432864/1‑107 (MQ=255) aTCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACCCCATGACTGG‑TGATGATGATTCCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAg < 2:663255/150‑1 (MQ=255) cGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGa < 1:2443558/150‑1 (MQ=255) cGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGa < 2:1089545/150‑1 (MQ=255) ggTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGAc < 2:780379/150‑1 (MQ=255) tCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCa < 1:2129142/150‑1 (MQ=255) aCGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACt > 2:671085/1‑150 (MQ=255) aCGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACt > 2:2212564/1‑150 (MQ=255) cgccgcTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTa > 2:2263422/1‑150 (MQ=255) ccgcTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTAcc > 1:1565365/1‑150 (MQ=255) cTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATc > 2:2429865/1‑150 (MQ=255) gCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATc > 1:133745/1‑98 (MQ=255) cGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTg < 1:1195191/150‑1 (MQ=255) tCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGt < 1:79076/150‑1 (MQ=255) tCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGt > 2:1033448/1‑150 (MQ=255) gCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGttt > 2:440261/1‑150 (MQ=255) ccAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGTTTc > 1:1132271/1‑150 (MQ=255) cAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGTTTCa > 2:567923/1‑150 (MQ=255) aGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGTTTCAg < 2:30818/150‑1 (MQ=255) gCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGTCAGCAGGGAAGCGTGGTTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGTTTCAGt < 1:2376399/150‑1 (MQ=255) gCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTgg > 1:2002876/1‑143 (MQ=255) cACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGTTTCAGTGCGGc < 1:2286392/150‑1 (MQ=255) cACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGAACAAGGTCGAGCACCAGCACTAGCAACATTTCTGGGTTCAGTGCGGc > 2:21311/1‑150 (MQ=255) aCGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGTTTCAGTGCGGcc > 1:2308569/1‑150 (MQ=255) acgctggCGCGGTGCCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTg > 1:1466639/6‑126 (MQ=255) gATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGTTTCAGTGCGGCCAGTTCGGCCTg > 2:583740/1‑150 (MQ=255) gcgcGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGTTTCAGTGCGGCCAGTTCGGCCTGCGCAt > 2:1974056/1‑150 (MQ=255) gcgcGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGTTTCAGTGCGGCCAGTTCGGCCTGCGCAt > 2:783946/1‑150 (MQ=255) cgcgGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCTATACTACCTGCGGCTGGATTAGGCCGTAGGCGACCACTACCATCAGGTCTGGTTTCAGTGCGGCCAGTTGGGGCTGCGCATc > 1:1994646/1‑150 (MQ=255) cgcgGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGTTTCAGTGCGGCCAGTTCGGCCTGCGCATc < 2:428643/150‑1 (MQ=255) cACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGt > 2:1340411/1‑116 (MQ=255) cACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGt < 1:1340411/116‑1 (MQ=255) | CGTGCAAGGTGCCGCCGGTGTCCTCGGCGCTGATCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGTTTCAGTGCGGCCAGTTCGGCCTGCGCATCGGCA > NC_002947/77977‑78272 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |