| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 600,407 | G→T | 5.5% | R77R (CGG→CGT) | nrdR → | DNA‑binding transcriptional repressor NrdR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 600,407 | 0 | G | T | 5.5% | 350.3 / 6.8 | 108 | R77R (CGG→CGT) | nrdR | DNA‑binding transcriptional repressor NrdR |
| Reads supporting (aligned to +/- strand): ref base G (46/56); new base T (3/3); total (49/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.34e-01 | |||||||||||
Only 100 of 110 total aligned reads displayed.
GAGCAGGTGCGCCGCCGCCGTGAATGCGTGGCCTGCGGCGAGCGCTTCACCACCTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCTGGTGGTCGGTGAAATGGTCATGGCCGAGTTGCGCAAACTCGATGA > NC_002947/600258‑600553 | gAGCAGGTGCGCCGCCGCCGTGAATGCGTGGCCTGCGGCGAGCGCTTCACCACCTTCGAAACCGCCGAGCTGGTGCTTCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACgg > 1:156161/1‑150 (MQ=255) aGCAGGTGCGCCGCCGCCGTGAATGCGTGGCCTGCGGCGAGCGCTTCACCACCTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACggg < 2:1750400/150‑1 (MQ=255) gCAGGTGCGCCGCCGCCGTGAATGCGTGGCCTGCGGCGAGCGCTTCACCACCTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGc > 1:1076506/1‑150 (MQ=255) gCAGGTGCGCCGCCGCCGTGAATGCGTGGCCTGCGGCGAGCGCTTCACCACCTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGc < 1:1654079/150‑1 (MQ=255) cAGGTGCGCCGCCGCCGTGAATGCGTGGCCTGCGGCGAGCGCTTCACCACCTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGcc < 2:1934975/150‑1 (MQ=255) aGGTGCGCCGCCGCCGTGAATGCGTGGCCTGCGGCGAGCGCTTCACCACCTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGccc < 1:1895933/150‑1 (MQ=255) ggTGCGCCGCCGCCGTGAATGCGTGGCCTGCGGCGAGCGCTTCACCACCTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAACGCTGCGCGCTGTCATGCAACGGGCCCt < 1:1776562/150‑1 (MQ=255) ccgccgccgTGAATGCGTGGCCTGCGGCGAGCGCTTCACCACCTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGaaaa < 2:1141982/150‑1 (MQ=255) gccgccgTGAATGCGTGGCCTGCGGCGAGCGCTTCACCACCTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGc < 1:2284570/150‑1 (MQ=255) gccgcccGGAATGCGTGGCCTGCGGCGAGCGCTTCACCACCTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGc < 1:712940/150‑1 (MQ=255) ccgccgTGAATGCGTGGCCTGCGGCGAGCGCTTCACCACCTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCACGCAGGACGGCACGCGCCAACCCTTCGACTAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCg < 1:647525/150‑1 (MQ=255) gccgTGAATGCGTGGCCTGCGGCGAGCGCTTCACCACCTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCAGGAAAAGCGTc > 2:852217/1‑150 (MQ=255) cgTGAATGCGTGGCCTGCGGCGAGCGCTTCACCACCTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCg > 1:1053587/1‑150 (MQ=255) gTGAATGCGTGGCCTGCGGCGAGCGCTTCACCACCTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCgg < 2:484373/150‑1 (MQ=255) tGAATGCGTGGCCTGCGGCGAGCGCTTCACCACCTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGt > 2:1608394/1‑150 (MQ=255) gAATGCGTGGCCTGCGGCGAGCGCTTCACCACCTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTc > 1:274995/1‑150 (MQ=255) aTGCGTGGCCTGCGGCGAGCGCTTCACCACCTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAg < 2:156161/150‑1 (MQ=255) cTGCGGCGAGCGCTTCACCACCTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGCCGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAgcg > 2:730559/1‑150 (MQ=255) cTGCGGCGAGCGCTTCACCACCTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGCCGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAgcg > 2:729314/1‑150 (MQ=255) cggcgAGCGCTTCACCACCTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCt < 1:1846877/150‑1 (MQ=255) cgAGCGCTTCACCACCTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGa < 1:1835957/150‑1 (MQ=255) aGCGCTTCACCACCTTCGAAACCGCCGAGCTGGTGCTGTCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAg < 2:1735831/150‑1 (MQ=255) cTTCACCACCTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTgc < 2:2096560/150‑1 (MQ=255) ttCACCACCTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTgcg > 2:814224/1‑150 (MQ=255) ttCACCACCTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTgcg > 1:1099279/1‑150 (MQ=255) tCACCACCTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTgcgc < 1:2190957/150‑1 (MQ=255) tCACCACCTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTAAACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTgcgc < 1:755004/150‑1 (MQ=255) accaccTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATACAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTg > 1:1506758/1‑150 (MQ=255) caccTTCGAAACCGCCGAGCTGGTGCTGCCTCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGgc > 2:1405775/1‑150 (MQ=255) caccTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGgc > 2:1266330/1‑150 (MQ=255) caccTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGgc > 1:1662149/1‑150 (MQ=255) caccTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGgc > 2:341396/1‑150 (MQ=255) accTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGgcg > 2:317665/1‑150 (MQ=255) ccTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGgcgc > 2:1265815/1‑150 (MQ=255) cTTCGAAACCGCCGGGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGca < 2:1194861/150‑1 (MQ=255) cTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGca > 2:1156072/1‑150 (MQ=255) cTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGca < 1:814224/150‑1 (MQ=255) cTTCGAAACCGCCGAGCTGGTGCTGCCCAGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGca > 2:34811/1‑150 (MQ=255) ttCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCGTGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGcac > 2:630734/1‑150 (MQ=255) ttCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGcac > 2:357639/1‑150 (MQ=255) aCCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATACAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATNAag < 2:1506758/150‑1 (MQ=255) cgAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCg > 1:2369646/1‑150 (MQ=255) gTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCtgcgt < 1:357639/150‑1 (MQ=255) ccccGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGATCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACg > 2:447309/1‑150 (MQ=255) cGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGATCCGGCTGCGTGCGACGGGc < 1:2409430/150‑1 (MQ=255) cGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGc > 2:1175287/1‑150 (MQ=255) cGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCAAATCAAGAGCCGGCTGCGTGCGACGGGc < 2:750306/150‑1 (MQ=255) gCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGa < 2:1064541/150‑1 (MQ=255) tGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAgc > 2:581244/1‑150 (MQ=255) aTCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGgcg < 2:467538/114‑1 (MQ=255) aTCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGgcg > 1:467538/1‑114 (MQ=255) aTCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAgcgc < 2:2369646/150‑1 (MQ=255) tCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTCGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGcgcg > 1:800269/1‑150 (MQ=255) aaGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGaa < 1:317665/150‑1 (MQ=255) gCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTACGACGGGCGAGCGCGAAGt > 1:466253/1‑150 (MQ=255) aaGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTc < 1:34811/149‑1 (MQ=255) aCGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTccagt < 1:683718/150‑5 (MQ=255) cACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCt < 2:412869/150‑1 (MQ=255) cgcgCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCtgg < 1:1034014/150‑1 (MQ=255) cgcgCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCtgg < 1:1405775/150‑1 (MQ=255) cgcgCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCtgg < 1:1156072/150‑1 (MQ=255) cgcgCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCtgg > 1:376185/1‑150 (MQ=255) gcgnCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCtggt > 2:1507444/1‑150 (MQ=255) gcCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCGTCGTGCGACGGGCGAGCGCGAAGTCAAATCGCtggtgg > 1:622563/1‑150 (MQ=255) ccTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCTGGTGGTCGGTg < 2:1261609/150‑1 (MQ=255) ccTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCTGGTGGTCGGTg > 1:2025140/1‑150 (MQ=255) ttCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCaaa < 1:1518282/132‑1 (MQ=255) ttCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCaaa > 2:1518282/1‑132 (MQ=255) ttCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGc < 1:2024792/136‑1 (MQ=255) ttCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGc > 2:2024792/1‑136 (MQ=255) ttCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCTGGTGGTCGGTGaa > 1:919298/1‑150 (MQ=255) gcgacgaAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCTGGTGGTCGGTGaaa < 1:1287049/149‑1 (MQ=255) cgacgaAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCAAGCGCGAAGTCAAATCGCTGGTGGTCGGTGAAAt < 1:1175287/150‑1 (MQ=255) acgaAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCTGGTGGTCGGTGAAATgg < 1:1685467/150‑1 (MQ=255) cgaAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCTGGTGGTCGGTGAAATGGt < 2:2025140/150‑1 (MQ=255) cgaAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTACGACGGGCGAGCGCGAAGTCAAATCGCTGGTGGTCGGTGAAATGGt < 2:466253/150‑1 (MQ=255) gaagaaAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCtggtg < 2:2228915/135‑1 (MQ=255) gaagaaAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCtggtg > 1:2228915/1‑135 (MQ=255) gaagaaAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCTGGTGGTCGGTGAAATGGTc > 1:1425091/1‑150 (MQ=255) gaagaaAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCTGGTGGTCGGTGAAATGGTc > 2:729307/1‑150 (MQ=255) gaagaaAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCTGGTGGTCGGTGAAATGGTc < 1:341396/150‑1 (MQ=255) gaagaaAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCTGGTGGTCGGTGAAATGGTc > 1:1700152/1‑150 (MQ=255) aagaaAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCTGGTGGTCGGTGAAATGGTCa < 2:1076506/150‑1 (MQ=255) aaaaGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCTGGTGGTCGGTGAAATGGTCATgg < 1:729314/150‑1 (MQ=255) aaaaGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGGCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCTGGTGGTCGGTGAAATGGTCATgg < 1:730559/150‑1 (MQ=255) aaaGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCACATCGCTGGTGGTCGGTGAAATGGTCATGGc > 1:1083809/1‑150 (MQ=255) gcgcTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCTGGTGGTCGGTGAAATGGTCATGGCCGAGTTgc < 2:376185/150‑1 (MQ=255) gcgcTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCTGGTGGTCGGTGAAATGGTCATGGCCGAGTTgc < 2:644390/150‑1 (MQ=255) cgcTCGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCTGGTGGTCGGTGAAATGGTCATGGCCGAGTTgcg < 2:800269/150‑1 (MQ=255) gcTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCTGGTGGTCGGTGAAATGGTCATGGCCGAGTTgcgc > 2:1022621/1‑150 (MQ=255) aTGCAACGTGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCtggtg < 2:1182966/114‑1 (MQ=255) aTGCAACGTGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCtggtg < 2:1185961/114‑1 (MQ=255) aTGCAACGTGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCtggtg > 1:1186547/1‑114 (MQ=255) aTGCAACGTGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCtggtg > 1:1185961/1‑114 (MQ=255) aTGCAACGTGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCtggtg > 1:1182966/1‑114 (MQ=255) cAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCTGGTGGTCGGTGAAATGGTCATGGCCGAGTTGCGCAAACTCGAt < 1:581244/150‑1 (MQ=255) cAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCTGGTGGTCGGTGAAATGGTCATGGCCGAGTTGCGCAAACTCGAt < 1:929007/150‑1 (MQ=255) aaCGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGc > 1:1836606/1‑86 (MQ=255) aaCGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGc < 2:1836606/86‑1 (MQ=255) aCGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCTGGTGGTCGGTGAAATGGTCATGGCCGAGTTGCGCAAACTCGATGa > 2:2190962/1‑150 (MQ=255) | GAGCAGGTGCGCCGCCGCCGTGAATGCGTGGCCTGCGGCGAGCGCTTCACCACCTTCGAAACCGCCGAGCTGGTGCTGCCCCGGCTGATCAAGCAGGACGGCACGCGCCAGCCCTTCGACGAAGAAAAGCTGCGCGCTGGCATGCAACGGGCCCTGGAAAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCTGCGCTGGCGCACATCAAGAGCCGGCTGCGTGCGACGGGCGAGCGCGAAGTCAAATCGCTGGTGGTCGGTGAAATGGTCATGGCCGAGTTGCGCAAACTCGATGA > NC_002947/600258‑600553 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |