Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 78,125 | A→G | 5.1% | G116G (GGT→GGC) | fmt ← | methionyl‑tRNA formyltransferase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 78,125 | 0 | A | G | 5.1% | 416.5 / 6.5 | 138 | G116G (GGT→GGC) | fmt | methionyl‑tRNA formyltransferase |
Reads supporting (aligned to +/- strand): ref base A (58/72); new base G (3/4); total (61/77) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.68e-01 |
Only 100 of 141 total aligned reads displayed.
CGTGCAAGGTGCCGCCGGTGTCCTCGGCGCTGATCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGTTTCAGTGCGGCCAGTTCGGCCTGCGCATCGGCATT > NC_002947/77977‑78274 | tGCAAGGTGCCGCCGGTGTCCTCGGCGCTGATCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACcg < 2:1669639/150‑1 (MQ=255) aaGGTGCCGCCGGTGTCCTCGGCGCTGATCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCgcgc > 2:1269723/1‑150 (MQ=255) gTGCCGCCGGTGTCCTCGGCGCTGATCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGTGCCGCGccga < 1:940473/150‑3 (MQ=255) cgccgGTGTCCTCGGCGCTGATCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTg > 2:1948819/1‑150 (MQ=255) gccgGTGTCCTCGGCGCTGATCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTgg < 1:2370454/150‑1 (MQ=255) ccgGTGTCCTCGGCGCTGATCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCC‑CTATCTCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGgc < 1:413151/150‑1 (MQ=255) tgtCCTCGGCGCTGATCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGgcagca < 1:340268/150‑1 (MQ=255) cTCGGCGCTGATCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCa < 1:2412433/135‑1 (MQ=255) cTCGGCGCTGATCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGa > 2:2070313/1‑150 (MQ=255) cTCGGCGCTGATCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGa > 1:30818/1‑150 (MQ=255) tCGGCGCTGATCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGaa < 2:254122/150‑1 (MQ=255) gcgcTGATCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCAGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCg < 1:2409415/150‑1 (MQ=255) cTGATCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTgg < 1:2008882/134‑1 (MQ=255) cTGATCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTgg > 2:2008882/1‑134 (MQ=255) cTGATCGGGGTGACTAACTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTgg < 1:1945056/150‑1 (MQ=255) cTGAGCGGGGTGACTACCTCGAGCAGCAGCGGGCCGTTGGCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTgg < 1:1047217/150‑1 (MQ=255) aTCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTg > 2:1784344/1‑150 (MQ=255) gggTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGa < 1:1301530/150‑1 (MQ=255) gggTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGa < 2:702654/150‑1 (MQ=255) ggTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTTGAGCTGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGAt < 1:435408/150‑1 (MQ=255) ggTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGAt < 2:2222146/150‑1 (MQ=255) tGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGc < 1:633703/150‑1 (MQ=255) aCTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCaa < 1:1026695/150‑1 (MQ=255) ccTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGACGCGTGGATGTTGATGCAAcccg > 2:1715572/1‑149 (MQ=255) cTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCAGCGCTCACAGCTACCTCGGCACG‑TTGGATCTGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAg < 1:288967/150‑1 (MQ=255) agcagcATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGgcgc < 2:217998/150‑1 (MQ=255) gcagcaTCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCATCAGGGAAGCGTGGCTGTTGATGCAACCCAGGcgcg < 2:1280903/150‑1 (MQ=255) cagcaTCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCgg < 1:1381764/150‑1 (MQ=255) caTCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGat < 2:1390301/150‑1 (MQ=255) tCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGCCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCCGCatat > 2:619176/1‑150 (MQ=255) cGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATc < 1:2070313/150‑1 (MQ=255) cGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATc < 2:1123414/150‑1 (MQ=255) cGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATc < 2:215945/150‑1 (MQ=255) ggCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGTGCCGCGccga < 2:1023656/98‑3 (MQ=255) ggCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGGCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGTGCCGCGccga > 1:1023656/1‑96 (MQ=255) gCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGCTCGACGAGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAg > 1:412213/1‑150 (MQ=255) gCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCaa > 2:217765/1‑130 (MQ=255) gCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCaa < 1:217765/130‑1 (MQ=255) cGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGca > 1:355090/1‑150 (MQ=255) gtgtCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGcacc > 1:780379/1‑150 (MQ=255) tCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGTTGTTGATGCAACCCAGGCGCGGGATATCCAGCaccacc > 2:2376399/1‑150 (MQ=255) ccAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATg < 2:1940023/119‑1 (MQ=255) cAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTg > 2:802483/1‑150 (MQ=255) aGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGc > 2:544888/1‑150 (MQ=255) ggccggccTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTTGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTg > 2:1101895/1‑90 (MQ=255) ggccggccTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTTGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTg < 1:1101895/90‑1 (MQ=255) ggccggccTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCg < 2:2113551/150‑1 (MQ=255) cggccTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGgcagca > 1:736711/1‑93 (MQ=255) cggccTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGa > 1:1709806/1‑129 (MQ=255) cggccTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCCGCACCACCTGCGGCa > 2:873104/1‑150 (MQ=255) cggccTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCa > 2:1528927/1‑150 (MQ=255) ggccTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAg < 1:873104/150‑1 (MQ=255) gccTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTGAACGGCACG‑CGGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCGGTTGATGCAACCCAGGCGCGGGATCTCCTGCAATAGCTGCGGNAgg > 1:1565988/1‑150 (MQ=255) cTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGAt > 1:1895405/1‑150 (MQ=255) cTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGAt > 2:287437/1‑150 (MQ=255) ccAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCa < 2:2396536/150‑1 (MQ=255) ccAT‑GCGCATCACGGTCACGCCGCTTTCGGCGGCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCa < 2:2195940/150‑1 (MQ=255) cAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAg < 1:559135/150‑1 (MQ=255) cAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAg < 1:1219871/150‑1 (MQ=255) aT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAgg < 1:544888/150‑1 (MQ=255) cATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTa < 1:2191957/150‑1 (MQ=255) aTCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAg < 1:2432864/107‑1 (MQ=255) aTCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAg > 1:2372585/1‑150 (MQ=255) aTCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGAGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAg > 2:2432864/1‑107 (MQ=255) aTCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACCCCATGACTGG‑TGATGATGATTCCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAg < 2:663255/150‑1 (MQ=255) cGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGa < 2:1089545/150‑1 (MQ=255) ggTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGAc < 2:780379/150‑1 (MQ=255) tCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCa < 1:2129142/150‑1 (MQ=255) aCGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACt > 2:671085/1‑150 (MQ=255) cgccgcTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTa > 2:2263422/1‑150 (MQ=255) gccgcTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTAc < 1:1403205/150‑1 (MQ=255) gccgcTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTAc > 2:2152936/1‑150 (MQ=255) ccgcTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTAcc > 1:1565365/1‑150 (MQ=255) cTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATc < 1:2263422/150‑1 (MQ=255) cTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATc > 2:2429865/1‑150 (MQ=255) gCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATc > 1:133745/1‑98 (MQ=255) tCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGt > 2:1033448/1‑150 (MQ=255) gCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGttt > 2:440261/1‑150 (MQ=255) ccAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGTTTc > 1:1132271/1‑150 (MQ=255) gCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTgg > 1:2002876/1‑143 (MQ=255) gCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTgg < 2:2002876/143‑1 (MQ=255) cACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGTTTCAGTGCGGc < 1:2286392/150‑1 (MQ=255) cgtggaag‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGTTTCAGTGCGGcc < 2:304493/143‑1 (MQ=255) aCGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGTTTCAGTGCGGcc > 1:2308569/1‑150 (MQ=255) cACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGTTTCAGTGCGGCCAGtt < 1:1784344/150‑1 (MQ=255) tGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGTTTCAGTGCGGCCAGTTCGGcc < 1:440261/150‑1 (MQ=255) ggATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGTTTCAGTGCGGCCAGTTCGGCCt > 1:1313172/1‑150 (MQ=255) acgctggCGCGGTGCCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTg > 1:1466639/6‑126 (MQ=255) acgctggCGCGGTGCCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTg < 2:1466639/121‑1 (MQ=255) gATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGTTTCAGTGCGGCCAGTTCGGCCTg > 2:583740/1‑150 (MQ=255) aTCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGTTTCAGTGCGGCCAGTTCGGCCTgc < 2:2075214/150‑1 (MQ=255) gcgcGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGTTTCAGTGCGGCCAGTTCGGCCTGCGCAt > 2:1974056/1‑150 (MQ=255) gcgcGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGTTTCAGTGCGGCCAGTTCGGCCTGCGCAt > 2:783946/1‑150 (MQ=255) gcgcGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGTTTCAGTGCGGCCAGTTCGGCCTGCGCAt > 1:245714/1‑150 (MQ=255) cgcgGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGTTTCAGTGCGGCCAGTTCGGCCTGCGCATc < 1:1948819/150‑1 (MQ=255) cgcgGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGTTTCAGTGCGGCCAGTTCGGCCTGCGCATc < 2:428643/150‑1 (MQ=255) cACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGt > 2:1340411/1‑116 (MQ=255) aCCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGTTTCAGTGCGGCCAGTTCGGCCTGCGCATCGGCAtt > 1:1255788/1‑150 (MQ=255) aCCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGTTTCAGTGCGGCCAGTTCGGCCTGCGCATCGGCAtt > 1:2060839/1‑150 (MQ=255) aCCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATAAGGCCGTAGGCGACCACTACCATCAGGTCTGGTTTCAGTGCGGCCAGTTCGGCCTGCGCATCGGCAtt < 1:802483/150‑1 (MQ=255) | CGTGCAAGGTGCCGCCGGTGTCCTCGGCGCTGATCGGGGTGACTACCTTGAGCAGCATCGGGCCGGTGTCCAGGCCGGCCTCCAT‑GCGCATCACGGTCACGCCGCTTTCGGCGTCGCCAGCTTCCACGGCACG‑CTGGATCGGCGCGGCACCGCGCCAGCGTGGCAGCAGGGAAGCGTGGCTGTTGATGCAACCCAGGCGCGGGATATCCAGCACCACCTGCGGCAGGATCAGGCCGTAGGCGACCACTACCATCAGGTCTGGTTTCAGTGCGGCCAGTTCGGCCTGCGCATCGGCATT > NC_002947/77977‑78274 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |