| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,005,623 | C→A | 7.2% | L184M (CTG→ATG) ‡ | PP_0867 → | FecA‑like outer membrane receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,005,623 | 0 | C | A | 7.2% | 299.1 / 6.6 | 96 | L184M (CTG→ATG) ‡ | PP_0867 | FecA‑like outer membrane receptor |
| Reads supporting (aligned to +/- strand): ref base C (50/39); new base A (2/5); total (52/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.41e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.00e-01 | |||||||||||
AGCGTGGTACAGAACCACCCTGGGGCACGCACTGTGGTACGCCGCGAGGCAATGGTGGAGAAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATGGCCAGCCACAGCTGTCGATGGCACCGATTTCTTCTGGCAACCTCGACAGCATC > NC_002947/1005479‑1005772 | agCGTGGTACAGAACCACCCTGGGGCACGCACTGTGGTACGCCGCGAGGCAATGGTGGAGAAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGACAGA‑CCCTGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCg < 1:1357975/150‑1 (MQ=255) cGTGGTACAGAACCACCCTGGGGCACGCACTGTGGTACGCCGCGAGGCAATGGTGGAGAAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCCACGGGACCGGTGGCAGCGACCTGTCGCt < 2:1251028/150‑1 (MQ=255) tGGTACAGAACCACCCTGGGGCACGCACTGTGGTACGCCGCGAGGCAATGGTGGAGAAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGa > 1:2348807/1‑150 (MQ=255) tGGTACAGAACCACCCTGGGGCACGCACTGTGGTACGCCGCGAGGCAATGGTGGAGAAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGa > 1:2432649/1‑150 (MQ=255) tGGTACAGAACCACCCTGGGGCACGCACTGTGGTACGCCGCGAGGCAATGGTGGAGAAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGa > 1:637265/1‑150 (MQ=255) tGGTACAGAACCACCCTGGGGCACGCACTGTGGTACGCCGCGAGGCAATGGTGGAGAAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACAGGTCGCTgc < 2:566522/150‑2 (MQ=255) gggTACAGAACCACCCTGGGGCACGCACTGTGGTACGCCGCGAGGCAATGGTGGAGAAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCCGCGACAGGTCGCTgc < 2:1673792/149‑2 (MQ=255) ggTACAGAACCACCCTGGGGCACGCACTGTGGTACGCCGCGAGGCAATGGTGGAGAAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGaa > 1:1507536/1‑150 (MQ=255) tACAGAACCACCCTGGGGCACGCACTGTGGTACGCCGCGAGGCAATGGTGGAGAAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCGACGGGACCGGTGGCAGCGACCTGTCGCTGAACg > 2:562088/1‑150 (MQ=255) tACAGAACCACCCTGGGGCACGCACTGTGGTACGCCGCGAGACAATGGTGGAGAAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACg > 2:2021169/1‑150 (MQ=255) cAGAACCACCCTGGGGCACGCACTGTGGTACGCCGCGAGGCAATGGTGGAGAAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTg > 2:2112723/1‑150 (MQ=255) aGAACCACCCTGGGGCACGCACTGTGGTACGCCGCGAGGCAATGGTGGAGAAGGGCGCAATGAACGTGCGCGGCGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTg‑g > 1:1747664/1‑150 (MQ=255) gAACCACCCTGGGGCACGCACTGTGGTACGCCGCGAGGCAATGGTGGAGAAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTg‑gg > 1:940194/1‑150 (MQ=255) aaCCACCCTGGGGCACGCACTGTGGTACGCCGCGAGGCAATGGTGGAGAAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACAGGTCGCTgc < 2:1856962/142‑2 (MQ=255) aaCCACCCTGGGGCACGCACTGTGGTACGCCGCGAGGCAATGGTGGAGAAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACAGGTCGCTgc > 1:1856962/1‑141 (MQ=255) aaCCACCCTGGGGCACGCACTGTGGTACGCCGCGAGGCAATGGTGGAGAAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACAGGTCGCTgc > 1:862559/1‑141 (MQ=255) aaCCACCCTGGGGCACGCACTGTGGTACGCCGCGAGGCAATGGTGGAGAAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACAGGTCGCTgc < 2:862559/142‑2 (MQ=255) ccaccCTGGGGCACGCACTGTGGTACGCCGCGAGGCAATGGTGGAGAAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGt > 1:354379/1‑150 (MQ=255) caccCTGGGGCACGCACTGTGGTACGCCGCGAGGCAATGGTGGAGAAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTa > 1:813510/1‑150 (MQ=255) cccTGGGGCACGCACTGTGGTACGCCGCGAGGCAATGGTGGAGAAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTAcg > 2:449348/1‑150 (MQ=255) ccTGGGGCACGCACTGTGGTACGCCGCGAGGCAATGGTGGAGAAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTAcgc > 1:388450/1‑150 (MQ=255) gcacgcacTGTGGTACGCCGCGAGGCAATGGTGGAGAAGGGCGCAATGAACGTGCGAACAGTGCTGCGCGG‑ATCGGCCGGGGTGCAGGTGCAGGACTCCAACGGGACCGGTGGAAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCtt > 1:1485358/1‑150 (MQ=255) cacgcacTGTGGTACGCCGCGAGGCAATGGTGGAGAAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTa > 2:820688/1‑150 (MQ=255) cacgcacTGTGGTACGCCGCGAGGCAATGGTGGAGAAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAATGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTa > 2:1211925/1‑150 (MQ=255) cTGTGGTACGCCGCGAGGCAATGGTGGAGAAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTcgc < 1:2040479/150‑1 (MQ=255) tgtgGTACGCCGCGAGGCAATGGTGGAGAAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTcgcg < 1:939069/150‑1 (MQ=255) tgtgGTACGCCGCGAGGCAATGGTGGAGAAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGCGGCCACCAGCGATCGCAGAACGCT‑TCCGAACCCGGCCTTACTTcgcg > 2:1842414/1‑150 (MQ=255) gccgcGAGGCAATGGTGGAGAAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTcgc > 2:267187/1‑150 (MQ=255) ccgcGAGGCAATGGTGGAGAAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTcgcc > 1:2074724/1‑150 (MQ=255) cgcgAGGCAATGGTGGAGAAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCt < 2:2307975/131‑1 (MQ=255) cgcgAGGCAATGGTGGAGAAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCt > 1:2307975/1‑131 (MQ=255) gCAATGGTGGAGAAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAAc < 2:1398359/108‑1 (MQ=255) gCAATGGTGGAGAAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAAc > 1:1398359/1‑108 (MQ=255) aTGGTGGAGAAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACg < 2:2398039/150‑1 (MQ=255) aTGGCGGAGAGGGGCGAAATGACCGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACCTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACg < 1:1027524/150‑1 (MQ=255) gagaAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACTGCTGACGACGGGCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTg > 1:146858/1‑150 (MQ=255) gggCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGa > 2:1123603/1‑150 (MQ=255) gcgcAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATg < 2:637265/150‑1 (MQ=255) cgcAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATgg < 1:282088/150‑1 (MQ=255) cgcAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATgg < 2:940194/150‑1 (MQ=255) aaTGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCAt < 2:56717/150‑1 (MQ=255) aCGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCgg < 1:2021169/150‑1 (MQ=255) cgcgACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGgccgcc > 2:1259617/1‑150 (MQ=255) gACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTc < 2:2143733/150‑1 (MQ=255) gACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTc < 1:2126658/150‑1 (MQ=255) gACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCATTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCNTTc < 2:1507536/150‑1 (MQ=255) aCGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTcg > 1:1536558/1‑150 (MQ=255) tgctgcGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCgcgc > 2:532775/1‑150 (MQ=255) gctgcGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGcc > 1:597399/1‑150 (MQ=255) tgcGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGt < 1:1259617/150‑1 (MQ=255) tgcGCCGCATC‑CCCGGCGCGCAAGTGCAGGACTCCAACGGGACAGGTAGTA‑AGACAAGACATTTATTGAGTGGCATCCGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGt < 1:2112723/150‑1 (MQ=255) gcgcGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTg‑g < 2:2116842/71‑1 (MQ=255) gcgcGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTg‑g > 1:2116842/1‑71 (MQ=255) gcgcGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTa > 1:1201685/1‑150 (MQ=255) gcgGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGAAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATg < 2:1485358/150‑1 (MQ=255) ggCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATGgc > 2:2274478/1‑150 (MQ=255) atacacGGCGTGAAAGTTCAAGAAGCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑AGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATGgccag > 2:279412/6‑150 (MQ=255) cccGGCGTGCAATTGCAGGACTCCAACGGGAGCGGTGGGAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTATCGCCGCGCTCCACGGCACTGAACCATGGCAGCCCGGCCGCCTTCGCGCCGTATGgccagcca > 2:534414/1‑150 (MQ=255) cccGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATGgccagcca > 1:267660/1‑150 (MQ=255) ccGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATGGCCAGCcac > 1:1573783/1‑150 (MQ=255) ccGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATGGCCAGCcac > 1:2045392/1‑150 (MQ=255) cGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATGCCGGCCGCCTTCGCGCCGTATGGCCAGCcaca > 1:1819534/1‑150 (MQ=255) cGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATGACGATCGCCTTCGCGCCGTATGGCCAGCcaca > 1:1819871/1‑150 (MQ=255) cGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATGGCCAGCcaca < 2:2348807/150‑1 (MQ=255) cGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATGGCCAGCCACAGCt < 2:1483896/150‑1 (MQ=255) aaGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATGGCCAGCCACAGCTGTCGa < 2:561665/150‑1 (MQ=255) aGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATGGCCAGCCACAGCTGTCGAt < 2:1201685/150‑1 (MQ=255) aGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATGGCCAGCCACAGCTGTCGAt < 1:2031256/150‑1 (MQ=255) tGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATGGCCAGCCACAGCTGTCGATgg < 1:820688/150‑1 (MQ=255) cacgACCCCAACGGGACCGGTGGCAGCGACCTGTCGCTCAACTTG‑GGCGAACGCGGCCTTACTTCGCCCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCTGCCGCCTTCGCGCCGTATGGCCAGCCACAGCTGTCGATGGCa < 1:778124/147‑1 (MQ=255) aGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATGGCCAGCCACAGCTGTCGATGGCAc < 2:1536558/150‑1 (MQ=255) gACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTg < 2:1582443/42‑1 (MQ=255) gACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTg > 1:1582443/1‑42 (MQ=255) aCTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATGGCCAGCCACAGCTGTCGATGGCACCGa > 2:1581996/1‑150 (MQ=255) aCTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGAATCCCGGCCGCCTTCGCGCCGTATGGCCAGCCACAGCTGTCGATGGCACCGa < 1:2274478/150‑1 (MQ=255) cTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATGGCCAGCCACAGCTGTCGCTGGCACCGAt > 1:1072217/1‑150 (MQ=255) tCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTcg > 1:439616/1‑112 (MQ=255) tCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTcg < 2:439616/112‑1 (MQ=255) tCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATGGCCAGCCACAGCTGTCGATGGCACCGAtt > 1:2350760/1‑150 (MQ=255) tCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATGGCCAGCCACAGCTGTCGATGGCACCGAtt > 2:1869943/1‑150 (MQ=255) cAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATGGCCAGCCACAGCTGTCAATGGCACCGATttc > 1:518538/1‑150 (MQ=255) cAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCACGGCACGGGACTGATCGATGGCATCCCGAAAGCCTTCACGCCGTATGGCCAGCCACAGCTGTCGATGCCACCGATttc > 1:533773/1‑150 (MQ=255) cGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATGGCCAGCCACAGCTGTCGATGGCACCGATttcttc < 2:597399/150‑1 (MQ=255) cGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATGGCCAGCCACAGCTGTCGATGGCACCGATttcttc < 1:1211925/150‑1 (MQ=255) cGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATGGCCAGCCACAGCTGTCGATGGCACCGATttcttc < 2:267660/150‑1 (MQ=255) cGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATGGCCAGCCACAGCTGTCGATGGCACCGATttcttc < 2:2074724/150‑1 (MQ=255) gggACCGGTGGCTTCGACCTGTCGCTGAACGTG‑GGCGTCCCCTGCCGTACTGCAAGTTTTCCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATGGCCAGCCACAGCTGTCGATGGCACCGATTtcttct > 2:1263911/1‑150 (MQ=255) gggACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCACCCCGGCCGCCTTCGCGCCGTATGGCCAGCCACAGCTGTCGATGGCACCGATTtcttct < 2:2432649/150‑1 (MQ=255) ggACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATGGCCAGCCACAGCTGTCGATGGCACCGATTTCTTCTg < 2:354379/150‑1 (MQ=255) gACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATGGCCAGCCACAGCTGTCGATGGCACCGATTtcttct < 1:1684791/148‑1 (MQ=255) gACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATGGCCAGCCACAGCTGTCGATGGCACCGATTtcttct > 2:1684791/1‑148 (MQ=255) cGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATGGCCAGCCACAGCTGTCGATgg > 2:2294285/1‑131 (MQ=255) cGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATGGCCAGCCACAGCTGTCGATgg < 1:2294285/131‑1 (MQ=255) gCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATGGCCAGCCACAGCTGTCGATGGCACCGATTTCTTCTGGCAACCTCg > 1:766555/1‑150 (MQ=255) cAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCCTCCCGGCCGCCTTCGCGCCGTATGGCCAGCCACAGCTGTCGATGGCACCGATTTCTTCTGGCAACCTCGa < 1:1123603/150‑1 (MQ=255) cAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATGGCCAGCCACAGCTGTCGATGGCACCGATTTCTTCTGGCAACCTCGa > 2:380879/1‑150 (MQ=255) cTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATGGCCAGCCACAGCTGTCGAt > 1:972373/1‑116 (MQ=255) cTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATGGCCAGCCACAGCTGTCGAt < 2:972373/116‑1 (MQ=255) cTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATGGCCAGCCACAGCTGTCGATGGCACCGATTTCTTCTGGCAACCTCGACAGCATc < 1:2294215/150‑1 (MQ=255) | AGCGTGGTACAGAACCACCCTGGGGCACGCACTGTGGTACGCCGCGAGGCAATGGTGGAGAAGGGCGCAATGAACGTGCGCGACGTGCTGCGCGGCATC‑CCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAACGTG‑GGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGCCGTATGGCCAGCCACAGCTGTCGATGGCACCGATTTCTTCTGGCAACCTCGACAGCATC > NC_002947/1005479‑1005772 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |