| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,011,776 | A→T | 5.4% | K62M (AAG→ATG) | prfC → | peptide chain release factor 3 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,011,776 | 0 | A | T | 5.4% | 337.9 / 7.5 | 113 | K62M (AAG→ATG) | prfC | peptide chain release factor 3 |
| Reads supporting (aligned to +/- strand): ref base A (50/56); new base T (4/2); total (55/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.26e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.85e-01 | |||||||||||
Only 100 of 115 total aligned reads displayed.
TCGCAATCATTTCCCACCCCGACGCCGGTAAGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCACCCTGACCGCGGTGGACTCGGCGCTGATGGTG > NC_002947/1011632‑1011921 | tCGCAATCATTTCCCACCCCGACGCCGGTAAGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCTAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAagcagc < 2:1164576/150‑1 (MQ=255)tCGCAATCATTTCCCACCCCGACGCCGGTAAGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAagcagc < 2:1780541/150‑1 (MQ=255) gCAATCATTTCCCACCCCGACGCCGGTAAGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAgcgc < 1:2130332/150‑1 (MQ=255) tCATTTCCCACCCCGACGCCGGTAAGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGTGCGGCa < 1:1918449/150‑1 (MQ=255) tCATTTCCCACCCCGACGCCGGTAAGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCa > 1:282985/1‑150 (MQ=255) tttCCCACCCCGACGCCGGTAAGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCAtct < 1:1082024/150‑1 (MQ=255) cccACCCCGACGCCGGTAAGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCa > 2:1349665/1‑150 (MQ=255) cACCCCGACGCCGGTAAGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATc < 1:1717254/150‑1 (MQ=255) gACGCCGGTAAGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCaccacc > 1:581381/1‑150 (MQ=255) aCGCCGGTAAGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACATGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCt < 1:1496469/150‑1 (MQ=255) ccGGTAAGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCgg < 2:476938/150‑1 (MQ=255) cGGTAAGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCCCCTCGGt < 2:1355683/150‑1 (MQ=255) ggTAAGACCACCATCACCGAGAAGCCCGAAAAGGTGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTg > 1:663823/1‑150 (MQ=255) gTAAGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGCGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGa > 1:287850/1‑150 (MQ=255) tAAGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGAt < 2:688566/150‑1 (MQ=255) tAAGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGAt < 1:1686974/150‑1 (MQ=255) aaGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCCTCTCCATCACCACCTCGGTGATg > 1:121779/1‑150 (MQ=255) gACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCa < 2:544273/150‑1 (MQ=255) accaccATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCAGGTTGGTGCAg > 1:1283109/1‑150 (MQ=255) ccaccaTCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGt > 1:2350277/1‑150 (MQ=255) tCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGt > 1:309302/1‑150 (MQ=255) aCCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTAc > 1:1011959/1‑150 (MQ=255) cGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACcg > 2:307001/1‑150 (MQ=255) gaAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGa < 1:1169065/150‑1 (MQ=255) aaGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAg < 2:581381/150‑1 (MQ=255) ctgctgctgATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTTCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCTGAGCTGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGcac < 1:2274455/150‑1 (MQ=255) tgctgctgATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGcaca > 1:630209/1‑150 (MQ=255) gctgctgATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACAt < 1:1454751/150‑1 (MQ=255) tgctgATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATNACCACCTCGGTGATACAGTTCCCGTACCGCGAGCACATGa < 1:1935337/150‑1 (MQ=255) tgctgATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGa < 2:1705223/150‑1 (MQ=255) tgctgATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGa < 2:282985/150‑1 (MQ=255) tgctgATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCGCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGa > 1:1749377/1‑150 (MQ=255) cggtgATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACAtca < 2:381761/147‑3 (MQ=255) tgATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGGAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCa > 2:1037911/1‑150 (MQ=255) aTGGGCCAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAAc < 1:701050/150‑1 (MQ=255) gggCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCt < 2:2139537/150‑1 (MQ=255) ggCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTg > 1:1611205/1‑150 (MQ=255) ggaaGGCCATGGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGAGCGGCATATCCATCACCACCTCGGTGATGCAGTTCCCGCACGGCGATCACATGATCAACCTGc > 2:1215225/3‑150 (MQ=255) gCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGc < 2:1546171/150‑1 (MQ=255) aaGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCCCGAACTACAGGAGGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTc > 2:919329/1‑150 (MQ=255) aaGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTc < 1:897767/150‑1 (MQ=255) aGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCg > 2:1988702/1‑150 (MQ=255) ggCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGa < 2:1611205/150‑1 (MQ=255) gCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACAccccc < 1:307001/150‑1 (MQ=255) ggTACCGTAAAGTCGCGCAAGTCCGCCCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGaa < 2:1309546/150‑1 (MQ=255) cGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCgg < 1:212661/86‑1 (MQ=255) cGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCgg > 2:212661/1‑86 (MQ=255) cGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGa > 1:495735/1‑108 (MQ=255) cGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGa < 2:495735/108‑1 (MQ=255) cGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGa > 2:2373693/1‑129 (MQ=255) cGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGa < 1:2373693/129‑1 (MQ=255) cGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGaa < 1:1334562/145‑1 (MQ=255) cGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGaa > 2:1334562/1‑145 (MQ=255) gTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTtc > 2:570403/1‑150 (MQ=255) gTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTAGGCCTGGGAGGGCCGGGTGGCGGAGCGCAGCATCGCCAACACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTtc > 1:44383/1‑150 (MQ=255) gAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTtctc < 1:442389/150‑1 (MQ=255) gAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTtctc < 2:2408228/150‑1 (MQ=255) aaGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCg < 1:390846/150‑1 (MQ=255) tCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGaa < 1:326922/150‑1 (MQ=255) gcgcAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGa > 2:1734813/1‑150 (MQ=255) gcgcAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCAGACAAAAAAAAATTTTCGGAAGa > 2:1636020/1‑150 (MQ=255) aaGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACAcc < 1:570403/150‑1 (MQ=255) aaGTCCCACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACAcc < 2:44383/150‑1 (MQ=255) gTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGATGCCGCGCTGCTTCTCCAt < 2:1463619/60‑1 (MQ=21) gTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGATGCCGCGCTGCTTCTCCAt > 1:1463619/1‑60 (MQ=21) cGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGGCTTCTCGGAAGACACCTACCg > 2:383901/1‑150 (MQ=255) cGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCg > 1:632766/1‑150 (MQ=255) cGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCg > 1:2170008/1‑150 (MQ=255) gACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACAcccc < 1:676961/116‑1 (MQ=255) gACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACAcccc > 2:676961/1‑116 (MQ=255) aCCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCCCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCa > 2:1529509/1‑150 (MQ=255) ccGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCAc > 2:849219/1‑150 (MQ=255) cgccacgccaCCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCAcc < 2:121779/150‑1 (MQ=255) ccacgccacCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCACCCt > 1:690035/1‑150 (MQ=255) acgccacCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCACCCTGa < 1:397949/150‑1 (MQ=255) cTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATg < 2:1544085/58‑1 (MQ=255) cTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATg > 1:1544085/1‑58 (MQ=255) cTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCCCGAAGACTTCTCGGAAGACACCTACCGCACCCTGACCGCgga < 2:699487/150‑2 (MQ=255) cTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCACCCTGACCGCGGt < 2:2350277/150‑1 (MQ=255) tCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCAcc < 2:153972/138‑1 (MQ=255) tCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCAcc > 1:153972/1‑138 (MQ=255) tCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCACCCTGACCGCGGTg > 1:2445961/1‑150 (MQ=255) tCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCGCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCACCCTGACCGCGGTg > 2:2301102/1‑150 (MQ=255) gctggaAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCACCCTGACCGCGGTGGACTCGgc > 2:1004790/3‑150 (MQ=255) tggaAATGGAGAAGCAGCGCGGCATCTCCATCACCCACTATGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCACCCTGACCGCGGTGGACTCGgcgc < 1:725418/150‑1 (MQ=255) tggaAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCACCCTGACCGCGGTGGACTCGgcgc < 2:2445961/150‑1 (MQ=255) ggaAATGGAGGAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCACCCTGACCGCGGTGGACTCGGCGCt < 1:1037911/150‑1 (MQ=255) ggaAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCAcc < 1:1939783/127‑1 (MQ=255) aaaTGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCACCCTGACCGCGGTGGACTCGGCGCtta < 1:2301102/150‑3 (MQ=255) aaaTGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGCACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACCCCTCCCGCACCCTGACCGCGGTGGACTCGGCGCTGa < 2:1850380/150‑1 (MQ=255) aaTGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGGCTTCTCGGAAGACACCTACCGCACCCTGACCGCGGTGGACTCGGCGCTGAt < 1:383901/150‑1 (MQ=255) aTGGAGATGCCGCGCTGCTTCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCACCCTGACCGCGGTGGACTCGGCGCTGATg > 2:993032/1‑150 (MQ=255) aTGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCACCCTGACCGCGGTGGACTCGGCGCTGATg < 2:1011959/150‑1 (MQ=255) tGGAGATGCCGCGCTGCTTCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCACCCTGACCGCGGTGGACTCGGCGCTGATg < 2:2445022/149‑1 (MQ=255) tGGAGATGCCGCGCTGCTTCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCACCCTGACCGCGGTGGACTCGGCGCTGATg > 1:2445022/1‑149 (MQ=255) ggAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCACCCTGACCGCGGTGGACTCGGCGCTGATGGt > 2:1570475/1‑150 (MQ=255) ggAGAAGCAGCGCGGCAGCTCCATCCCCCCCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCACCCTGACCGCGGTGGACTCGGCGCTGATGGt < 2:845968/150‑1 (MQ=255) gagaAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACCCCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCACCCTGACCGCGGTGGACTCGGCGCTGATGGTg < 2:1749377/150‑1 (MQ=255) gaAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCACCCTGACCGCGGt < 2:1798491/129‑1 (MQ=255) gaAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCACCCTGACCGCGGt > 1:1798491/1‑129 (MQ=255) | TCGCAATCATTTCCCACCCCGACGCCGGTAAGACCACCATCACCGAGAAGCTGCTGCTGATGGGCAAGGCCATTGCCGTCGCCGGTACCGTGAAGTCGCGCAAGTCCGACCGCCACGCCACCTCCGACTGGATGGAAATGGAGAAGCAGCGCGGCATCTCCATCACCACCTCGGTGATGCAGTTCCCGTACCGCGAGCACATGATCAACCTGCTCGACACCCCCGGCCACGAAGACTTCTCGGAAGACACCTACCGCACCCTGACCGCGGTGGACTCGGCGCTGATGGTG > NC_002947/1011632‑1011921 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |