Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 1,031,923 | T→A | 5.7% | L5* (TTG→TAG) ‡ | PP_0889 → | hypothetical protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 1,031,923 | 0 | T | A | 5.7% | 321.5 / 8.7 | 105 | L5* (TTG→TAG) ‡ | PP_0889 | hypothetical protein |
Reads supporting (aligned to +/- strand): ref base T (47/52); new base A (4/2); total (51/54) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.28e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.14e-01 |
Only 100 of 109 total aligned reads displayed.
CAATATCTCGGCCACCGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGTGGCAGAACGACCCTGCCACCCTCGACTGGCAGG > NC_002947/1031774‑1032072 | cAATATCTCGGCCACCGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCtt > 2:1661047/1‑150 (MQ=255) cAATATCTCGGCCACCGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCtt < 1:772330/150‑1 (MQ=255) tctcGGCCACCGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCcg < 1:260979/150‑1 (MQ=255) tctcGGCCACCGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCcg > 1:1524598/1‑150 (MQ=255) tcGGCCACCGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCcgcg > 2:122748/1‑150 (MQ=255) ggCCACCGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGaa > 1:1688306/1‑150 (MQ=255) ggCCACCGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGaa < 2:2223739/150‑1 (MQ=255) ccACCGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAgg < 1:238805/150‑1 (MQ=255) cACCGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTAATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAggc < 2:1280291/150‑2 (MQ=255) aCCGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGc > 2:1671256/1‑150 (MQ=255) aCCGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCAAGCCcgcgctcaca > 1:2194395/1‑144 (MQ=255) aCCGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCAAGCCcgcgct > 2:1476761/1‑144 (MQ=255) ccGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCt < 2:2216178/150‑1 (MQ=255) ccGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCt < 1:793632/150‑1 (MQ=255) cGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTg < 2:1688306/150‑1 (MQ=255) gCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGc > 2:2192064/1‑150 (MQ=255) aCGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCaa > 1:1443349/1‑150 (MQ=255) cGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCaaa < 1:1589770/150‑1 (MQ=255) gggCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGCTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAg < 2:1299824/150‑1 (MQ=255) cTGGGCATGCACCGACGAAATCTTCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCNCCTNCAACTGTGAGCGCGNGCTTGCCCGCGAAGGGCTGCAAAGCAGTc < 1:122748/150‑1 (MQ=255) ggCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCa > 2:2062606/1‑150 (MQ=255) ggCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCa > 2:2081691/1‑150 (MQ=255) aTGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATc < 1:2171012/150‑1 (MQ=255) cACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAg > 1:443300/1‑150 (MQ=255) cACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAg < 2:828624/150‑1 (MQ=255) cACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTCGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAg > 1:176820/1‑150 (MQ=255) ccGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGTTTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGc < 2:981625/150‑1 (MQ=255) ccGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGc < 1:1715033/150‑1 (MQ=255) cGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCg > 2:1579947/1‑150 (MQ=255) gacggacgTCGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGa < 1:1284720/150‑1 (MQ=255) gTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGAt > 1:195474/1‑150 (MQ=255) cAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCGATGCGAGCTCGATGAAg < 2:2435519/150‑1 (MQ=255) gcgcAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGt > 2:109881/1‑150 (MQ=255) gcAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTAc < 2:1524598/150‑1 (MQ=255) aaGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTg > 2:632408/1‑150 (MQ=255) aGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGt < 1:2316511/150‑1 (MQ=255) aGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGt < 1:1147332/150‑1 (MQ=255) tGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCCCCGGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCGGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTgg < 1:191077/150‑1 (MQ=255) gCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGt > 2:1278306/1‑150 (MQ=255) gCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTgc > 2:320591/1‑150 (MQ=255) gCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTgc < 1:632408/150‑1 (MQ=255) ggTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCt > 2:1687704/1‑150 (MQ=255) gTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTg > 2:1662858/1‑150 (MQ=255) gTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGCAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTg < 1:856204/150‑1 (MQ=255) ttCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTgg < 2:443300/150‑1 (MQ=255) ggCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTg < 1:1671256/150‑1 (MQ=255) cgcTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTCCTGTTGGTCATCCTTGCGCTGGTTGCa > 2:824456/1‑150 (MQ=255) cgcTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCa < 2:1477842/150‑1 (MQ=255) tGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTgg < 1:230468/127‑1 (MQ=255) tGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTgg > 2:230468/1‑127 (MQ=255) aTTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAg < 1:366536/150‑1 (MQ=255) tCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAgcg > 1:2049919/1‑150 (MQ=255) cTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCTAAGGGCTGCAAAGTAGTcc > 2:1376612/1‑88 (MQ=255) cTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGTAGTcc < 1:1376612/88‑1 (MQ=255) ttATCGATGATGTTGGCCTGTTCGCGGGGGTATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCa > 1:1639911/1‑150 (MQ=255) ttATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCAAGCCcgcgctc > 1:1644329/1‑68 (MQ=255) ttATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCAAGCCcgcgctc < 2:1644329/71‑4 (MQ=255) aTCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCaaa < 1:1661047/150‑1 (MQ=255) aTCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCaaa < 1:1566078/150‑1 (MQ=255) gatgatGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCt > 1:346844/1‑150 (MQ=255) tgatgTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGATAGCGCCAACGCGGa > 2:1320708/1‑150 (MQ=255) tgTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCaaa < 1:1168623/142‑1 (MQ=255) tgTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCaaa > 2:1168623/1‑142 (MQ=255) tGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGc < 1:1566225/84‑1 (MQ=255) tGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGc > 2:1566225/1‑84 (MQ=255) tGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTg < 1:1062620/150‑1 (MQ=255) gCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGc < 1:1250875/150‑1 (MQ=255) ccTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCtt > 2:2428257/1‑112 (MQ=255) ccTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCtt < 1:2428257/112‑1 (MQ=255) gggggAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCa < 1:2062606/150‑1 (MQ=255) gggggAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCa < 2:195474/150‑1 (MQ=255) aTCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGTGGCa < 2:1639911/150‑1 (MQ=255) tCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCACTCCGGGCACCGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGTGGCAg > 1:884505/1‑150 (MQ=255) gCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGaa > 1:233380/1‑123 (MQ=255) gCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGaa < 2:233380/123‑1 (MQ=255) gCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGa > 1:1294865/1‑134 (MQ=255) gCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGa < 2:1294865/134‑1 (MQ=255) gCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGTGGCAGAAc > 1:113023/1‑150 (MQ=255) gCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGTGGCAGAAc > 1:2432951/1‑150 (MQ=255) ccttcTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGATTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGTGGCAGAAc > 1:1664538/5‑150 (MQ=255) cTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGTGGCAGAACg < 1:1278306/150‑1 (MQ=255) cTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGGTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGTGGCAGAACGAcc > 2:595442/1‑150 (MQ=255) tGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCa < 2:2080134/43‑1 (MQ=255) tGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCa > 1:2080134/1‑43 (MQ=255) tGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAgcgc > 2:197066/1‑108 (MQ=255) tGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAgcgc < 1:197066/108‑1 (MQ=255) tGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGTg > 2:123882/1‑138 (MQ=255) tGCAACTGTGAGCGCGGGCTTGCCAGCTAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGTg < 1:123882/138‑1 (MQ=255) gCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGTAGACTGGCCTGACCCGCAGTGGCAGAACGACCCt < 1:1662858/150‑1 (MQ=255) gCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGTGGCAGAACGACCCt > 2:281180/1‑150 (MQ=255) gCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCGCGATGAAGGTGCTGTTGGTCATCCTTGCCCTGGTTGCAGGTAGCGCCAAAGCTGAAACCTGGACATGTCGGCAGGGGCAGAACGACCCt > 2:180579/1‑150 (MQ=255) tgAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGTGGCAGAACGACCCTGCCAccc > 1:922209/1‑150 (MQ=255) ccttcgcgGGCAAGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGTGGCAGAACGACCCTGCCAccc > 2:351375/5‑150 (MQ=255) aGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTg > 2:36999/1‑113 (MQ=255) aGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGTGGCAGAACGACCCTGCCACCCTc > 1:505040/1‑150 (MQ=255) gggCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGTGGCAGAACGACCCTg < 1:1722307/137‑1 (MQ=255) gggCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGTGGCAGAACGACCCTg > 2:1722307/1‑137 (MQ=255) ggCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCATTGCTGAAGACTGGCCTGACCCGCAGTGGCAGAACGACCCTGCCACCCTCGACTgg < 1:888594/150‑1 (MQ=255) ttGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGTGGCAGAACGACCCTGCCACCCTCGACTGGCAg > 1:2272487/1‑150 (MQ=255) tGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGTGGCAGAACGACCCTGCCACCCTCGACTGGCAgg < 1:1579947/150‑1 (MQ=255) | CAATATCTCGGCCACCGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGTGGCAGAACGACCCTGCCACCCTCGACTGGCAGG > NC_002947/1031774‑1032072 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |