Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 150,829 G→T 5.1% L41M (CTG→ATG)  PP_0142 ← ABC transporter permease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947150,8290GT 5.1% 414.1 / 5.2 127L41M (CTG→ATG) PP_0142ABC transporter permease
Reads supporting (aligned to +/- strand):  ref base G (57/63);  new base T (3/4);  total (60/67)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 131 total aligned reads displayed.

CAGCGCCTGGCTGGCTTCAGGCAGCGCGTGGGTGCAGTGCGACAGGCGCTCGGAGCCTAGCAGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTGGGGTTGGTCATAGGCTCCATGCAATTGACTCGGCGCTAAGGCTTAGGG  >  NC_002947/150680‑150977
                                                                                                                                                     |                                                                                                                                                       
cagcGCCTGGCTGGCTTCAGGCAGCGCGTGGGTGCAGTGCGACAGGCGCTCGGAGCCTAGCAGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAg                                                                                                                                                         <  1:1676526/150‑1 (MQ=255)
cagcGCCTGGCTGGCTTCAGGCAGCGCGTGGGTGCAGTGCGACAGGCGCTCGGAGCCTAGCAGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAg                                                                                                                                                         >  2:1422746/1‑150 (MQ=255)
         gctggctTCAGGCAGCGCGTGGGTGCAGTGCGACAGGCGCTCGGAGCCTAGCAGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGcgctcgct                                                                                                                                                >  1:714965/1‑150 (MQ=255)
          ctggctTCAGGCAGCGCGTGGGTGCAGTGCGACAGGCGCTCGGAGCCTAGCAGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCgctcgctc                                                                                                                                               >  1:117293/1‑150 (MQ=255)
           tggctTCAGGCAGCGCGTGGGTGCAGTGCGACAGGCGCTCGGAGCCTAGCAGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCCTGcgctcgcatt                                                                                                                                              <  1:1326163/150‑4 (MQ=255)
           tggctTCAGGCAGCGCGTGGGTGCAGTGCGACAGGCGCTCGGAGCCTAGCAGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGctct                                                                                                                                              >  2:1865588/1‑150 (MQ=255)
            ggctTCAGGCAGCGCGTGGGTGCAGTGCGACAGGCGCTCGGAGCCTAGCAGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCtctc                                                                                                                                             >  1:1304044/1‑150 (MQ=255)
               ttCAGGCAGCGCGTGGGTGCAGTGCGACAGGCGCTCGGAGCCTAGCAGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTcgcg                                                                                                                                          >  1:192535/1‑150 (MQ=255)
               ttCAGGCAGCGCGTGGGTGCAGTGCGACAGGCGCTCGGAGCCTAGCAGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTcgcg                                                                                                                                          >  1:2114568/1‑150 (MQ=255)
                  aGGCAGCGCGTGGGTGCAGTGCGACAGGCGCTCGGAGCCTAGCAGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCtt                                                                                                                                       >  2:2074417/1‑150 (MQ=255)
                    gCAGCGCGTGGGTGCAGTGCGACAGGCGCTCGGAGCCTAGCAGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGa                                                                                                                                     >  1:433174/1‑150 (MQ=255)
                     cAGCGCGTGGGTGCAGTGCGACAGGCGCTCGGAGCCTAGCAGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAg                                                                                                                                    <  1:470753/150‑1 (MQ=255)
                     cAGCGCGTGGGTGCAGTGCGACAGGCGCTCGGAGCCTAGCAGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAg                                                                                                                                    <  1:323228/150‑1 (MQ=255)
                     cAGCGCGTGGGTGCAGTGCGACAGGCGCTCGGAGCCTAGAAGTATACGGTGCACCGAAGCGCCGGCAGTGTCCAGTCTGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAg                                                                                                                                    <  1:534455/150‑1 (MQ=255)
                      aGCGCGTGGGTGCAGTGCGACAGGCGCTCGGAGCCTAGCAGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAg                                                                                                                                                         >  1:852366/1‑128 (MQ=255)
                      aGCGCGTGGGTGCAGTGCGACAGGCGCTCGGAGCCTAGCAGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAg                                                                                                                                                         <  2:852366/128‑1 (MQ=255)
                       gcgcGTGGGTGCAGTGCGACAGGCGCTCGGAGCCTAGCAGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGt                                                                                                                                  <  1:1209031/150‑1 (MQ=255)
                           gTGGGTGCAGTGCGACAGGCGCTCGGAGCCTAGCAGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGAGCAGGCTCTCGCTCTCGCGCTTGAGGTTGGc                                                                                                                              >  2:896179/1‑150 (MQ=255)
                            tGGGTGCAGTGCGACAGGCGCTCGGAGCCTAGCAGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCg                                                                                                                             <  1:731472/150‑1 (MQ=255)
                               gTGCAGTGCGACAGGCGCTCGGAGCCTAGCCGTTAGGAAAGTCGAGCCGACCGCTCATGGACCAGGGGGAACTCCAGTCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAg                                                                                                                          >  1:645429/1‑150 (MQ=255)
                                  cAGTGCGACAGGCGCTCGGAGCCTAGCAGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAgtgt                                                                                                                       <  1:1059520/150‑1 (MQ=255)
                                   aGTGCGACAGGCGCTCGGAGCCTAGCAGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCCTGcgctcgcatt                                                                                                                                              >  2:1788875/1‑123 (MQ=255)
                                   aGTGCGACAGGCGCTCGGAGCCTAGCAGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGtgtg                                                                                                                      >  2:1530655/1‑150 (MQ=255)
                                   aGTGCGACAGGCGCTCGGAGCCTAGCAGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGtgtg                                                                                                                      >  2:1375729/1‑150 (MQ=255)
                                      gCGACAGGCGCTCGGAGCCTAGCAGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCa                                                                                                                   <  1:862150/150‑1 (MQ=255)
                                        gACAGGCGCTCGGAGCCTAGCAGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAgg                                                                                                                 >  2:2417440/1‑150 (MQ=255)
                                        gACAGGCGCTCGGAGCCTAGCACTTAGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCGTGAGGTTGGCGTAGTGTGCCAgg                                                                                                                 <  2:1195699/150‑1 (MQ=255)
                                           aGGCGCTCGGAGCCTAGCAGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGTTGGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTc                                                                                                              <  1:896179/150‑1 (MQ=255)
                                            ggCGCTCGGAGCCTAGCAGTTCGGCCAGCAGTGACGCGCCGGCAGTGTCCAGGCTGTCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTcc                                                                                                             <  2:1245643/150‑1 (MQ=255)
                                            ggCGCTCGGAGCCTAGCAGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTcc                                                                                                             >  1:345232/1‑150 (MQ=255)
                                                    gAGCCTAGCAGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGc                                                                                                                              <  1:2383983/125‑1 (MQ=255)
                                                    gAGCCTAGCAGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGc                                                                                                                              >  2:2383983/1‑125 (MQ=255)
                                                      gCCTAGCAGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCa                                                                                                            >  1:1519250/1‑141 (MQ=255)
                                                        cTAGCAGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTaa                                                                                                 >  1:397771/1‑150 (MQ=255)
                                                         tAGCAGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAAt                                                                                                >  1:1645920/1‑150 (MQ=255)
                                                         tAGCAGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAAt                                                                                                >  2:2084880/1‑150 (MQ=255)
                                                             aGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACg‑‑c                                                                                          >  1:187198/1‑150 (MQ=255)
                                                              gTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACg‑‑ca                                                                                         <  2:397771/150‑1 (MQ=255)
                                                              gTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCACGCTGGAGGTTGGGGTAGTGGGCCAGGTGCCAGTCACCGGTAATACg‑‑ca                                                                                         <  2:1466589/150‑1 (MQ=255)
                                                               ttCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACg‑‑cgg                                                                                        <  1:1264764/150‑3 (MQ=255)
                                                               ttCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCAGTAATACg‑‑cag                                                                                        <  1:2417440/150‑1 (MQ=255)
                                                                 cGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGGCCATCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACg‑‑caggc                                                                                      >  1:1376971/1‑150 (MQ=255)
                                                                  ggCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACg‑‑caggca                                                                                     <  1:1422746/150‑1 (MQ=255)
                                                                   gcaagcagcGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACg‑‑caggcag                                                                                    <  1:506579/147‑1 (MQ=255)
                                                                    ccAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑caggcagg                                                                                   >  1:1908230/1‑150 (MQ=255)
                                                                     cagcagCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGGGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑Caggcaggc                                                                                  <  1:896754/150‑1 (MQ=255)
                                                                     cagcagCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCg                                                                                                     >  1:2111414/1‑133 (MQ=255)
                                                                     cagcagCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCg                                                                                                     <  2:2111414/133‑1 (MQ=255)
                                                                     cagcagCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑Caggcaggc                                                                                  >  2:1567846/1‑150 (MQ=255)
                                                                                cgcCGGCAGTGTCCAGGCGGCCCAACTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGgctgc                                                                      <  1:373363/150‑1 (MQ=255)
                                                                                  ccGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGctgctg                                                                    <  2:1645920/150‑1 (MQ=255)
                                                                                   cGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGCGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTgg                                                                   >  2:1031780/1‑150 (MQ=255)
                                                                                    ggCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGgt                                                                  <  2:345232/150‑1 (MQ=255)
                                                                                     gCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGTTCTCGCGCTTGAGGTTGGCGTAgtgt                                                                                                                       >  1:1983151/1‑99 (MQ=255)
                                                                                     gCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAgtgt                                                                                                                       <  2:1983151/99‑1 (MQ=255)
                                                                                         tgtCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCa                                                             <  1:2074417/150‑1 (MQ=255)
                                                                                         tgtCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCa                                                             <  1:1375729/150‑1 (MQ=255)
                                                                                           tCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAgg                                                           >  1:2281684/1‑150 (MQ=255)
                                                                                           tCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAgg                                                           <  2:2192719/150‑1 (MQ=255)
                                                                                           tCCAGGCGGCCCAACTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCg                                                                                                     >  1:1801334/1‑111 (MQ=255)
                                                                                           tCCAGGCGGCCCAACTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCg                                                                                                     <  2:1801334/111‑1 (MQ=255)
                                                                                            ccAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTg                                                                                                                                <  1:559088/83‑1 (MQ=255)
                                                                                            ccAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTg                                                                                                                                >  2:559088/1‑83 (MQ=255)
                                                                                               ggcggcCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAgg                                                                                                                                   <  1:1524690/77‑1 (MQ=255)
                                                                                               ggcggcCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAgg                                                                                                                                   >  2:1524690/1‑77 (MQ=255)
                                                                                                    cccAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTg                                                  >  2:1772007/1‑150 (MQ=255)
                                                                                                     ccAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTgg                                                 <  2:6214/150‑1 (MQ=255)
                                                                                                       aGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTgggg                                               >  2:1308803/1‑150 (MQ=255)
                                                                                                         ctggctgAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTGGGGtt                                             <  2:1471627/150‑1 (MQ=255)
                                                                                                          tggctgAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTGGGGTTg                                            <  1:2084880/150‑1 (MQ=255)
                                                                                                          tggctgAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTGGGGTTg                                            <  2:1674262/150‑1 (MQ=255)
                                                                                                          tggctgAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCAAAAGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTGGGGTTg                                            >  1:1221436/1‑150 (MQ=255)
                                                                                                              tgAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGGGCCAGGGTCCAGGCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTGGGGTTGGTCa                                        >  2:1892611/1‑150 (MQ=255)
                                                                                                              tgAGGTCGGCGACGGTGTCGGAAGGGCAATGCGAGCGCAGGCTCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTGGGGTTGGTCa                                        <  2:2336989/150‑1 (MQ=255)
                                                                                                                 ggTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTGGGGTTGGTCATAg                                     >  1:822825/1‑150 (MQ=255)
                                                                                                                  gTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTGGGGTTgg                                           >  2:688660/1‑143 (MQ=255)
                                                                                                                  gTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTGGGGTTgg                                           <  1:688660/143‑1 (MQ=255)
                                                                                                                  gTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTGGGGTTGGTCATAgg                                    >  2:231660/1‑150 (MQ=255)
                                                                                                                   tCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTGGGGTTGGTCATCGGc                                   >  2:544022/1‑150 (MQ=255)
                                                                                                                       cGACGGTGTCGGCAGGGCAATGCGAGAGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTGGGGTTGGTCATAGGCTCCa                               <  1:1567846/150‑1 (MQ=255)
                                                                                                                         aCGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTGGGGTTGGTCATAGGCTCCATg                             <  2:822825/150‑1 (MQ=255)
                                                                                                                             tgtCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTGGGGTTGGTCATAGGCTCCAt                              >  1:322804/1‑145 (MQ=255)
                                                                                                                             tgtCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTGGGGTTGGTCATAGGCTCCAt                              <  2:322804/145‑1 (MQ=255)
                                                                                                                             tgtCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTGGGGTTGGTCATAGGCTCCATGCAAt                         <  2:117293/150‑1 (MQ=255)
                                                                                                                              gtCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTCGTGTCCAGGGTGGCGCTGGGGTTGGTCATAGGCTCCATGCAAtt                        <  1:47485/150‑1 (MQ=255)
                                                                                                                                 ggCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTggg                                                <  2:2077828/123‑1 (MQ=255)
                                                                                                                                 ggCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTGGGGTTGGTCATAGGCTCCATGCAATTGAc                     >  1:1420607/1‑150 (MQ=255)
                                                                                                                                   cAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTGGGGTTGGTCATAGGCTCCATGCAATTGACTc                   <  2:2114568/150‑1 (MQ=255)
                                                                                                                                      ggCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTGGGGTTgg                                           >  2:1918234/1‑123 (MQ=255)
                                                                                                                                      ggCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTGGGGTTGGTCATAGGCTCCATGCAATTGACTCGgc                >  2:66290/1‑150 (MQ=255)
                                                                                                                                      ggCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTGGGGTTGGTCATAGGCTCCATGCAATTGACTCGgc                >  1:1118807/1‑150 (MQ=255)
                                                                                                                                      ggCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTGGGGTTGGTCATAGGCTCCATGCAATTGACTCGgc                >  2:1445940/1‑150 (MQ=255)
                                                                                                                                       gCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTggg                                                <  2:1652370/117‑1 (MQ=255)
                                                                                                                                       gCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTggg                                                >  1:1652370/1‑117 (MQ=255)
                                                                                                                                            gCGAGCGCCTGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTGGGGTTGGTCATAGGCTCCATGCAATTGACTc                   <  2:666028/141‑1 (MQ=255)
                                                                                                                                              gAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTg                                                  >  1:1576361/1‑108 (MQ=255)
                                                                                                                                               aGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTGGGGTTGGTCATAGGCTCCATGCAATTGACTCGGCGCTAAGGCt       <  1:872718/150‑1 (MQ=255)
                                                                                                                                                  gcAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTGGGGTTGGTCATAGGCTCCATGCAATTGACTCGGCGCTAAGGCTTAg    <  1:216279/150‑1 (MQ=255)
                                                                                                                                                    aGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTGGGGTTGGTCATAGGCTCCATGCAATTGACTCGGCGCTAAGGCTTAggg  <  1:1445940/150‑1 (MQ=255)
                                                                                                                                                    aGGCGCTCGCTCCTGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCTGAGGGTGTCGATCCGTC‑‑GCCGCCTGGGCGGCTGGTTTCCATGGTGGCGCTGGGGTTGGTCATAGGCTCCATGCAATTGACTCGGCGCTAAGGCTTAggg  <  1:544022/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                       
CAGCGCCTGGCTGGCTTCAGGCAGCGCGTGGGTGCAGTGCGACAGGCGCTCGGAGCCTAGCAGTTCGGCCAGCAGCGAAGCGCCGGCAGTGTCCAGGCGGCCCAGCTGGCTGAGGTCGGCGACGGTGTCGGCAGGGCAATGCGAGCGCAGGCGCTCGCTCTCGCGCTTGAGGTTGGCGTAGTGTGCCAGGGTCCAGTCACCGGTAATACG‑‑CAGGCAGGCCGGTTGGCTGCTGGTGTCCAGGGTGGCGCTGGGGTTGGTCATAGGCTCCATGCAATTGACTCGGCGCTAAGGCTTAGGG  >  NC_002947/150680‑150977

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: