| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,189,041 | A→G | 5.2% | intergenic (+25/+17) | PP_1038 → / ← tatC‑I | hypothetical protein/Sec‑independent protein translocase protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,189,041 | 0 | A | G | 5.2% | 365.4 / 5.0 | 123 | intergenic (+25/+17) | PP_1038/tatC‑I | hypothetical protein/Sec‑independent protein translocase protein |
| Reads supporting (aligned to +/- strand): ref base A (55/61); new base G (4/3); total (59/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.09e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.67e-01 | |||||||||||
Only 100 of 123 total aligned reads displayed.
GGAAGAGTGGAAGGTGGAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGAAAACACATCCGGCGGTGTCA > NC_002947/1188893‑1189188 | ggAAGAGTGGAAGGTGGAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCAc < 1:1435640/150‑1 (MQ=255) gAAGAGTGGAAGGTGGAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACg > 2:770238/1‑150 (MQ=255) aaGAGTGGAAGGTGGAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGGATCACGGCTATTCGCGGGCACGc < 2:1183690/150‑1 (MQ=255) aaGAGTGGAAGGTGGAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGc > 1:1183690/1‑150 (MQ=255) agTGGAAGGTGGAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCcg > 2:1783978/1‑150 (MQ=255) tGGAAGGTGGAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCcgcg > 2:2087676/1‑150 (MQ=255) aaGGTGGAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGACCGCATCACGGCTATTCGCGGGCGTGCCCGCGaat < 2:1068073/150‑2 (MQ=255) aaGGTGGAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCAGCTCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGaaa < 1:743899/150‑1 (MQ=255) aGGTGGAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAg < 2:2149752/150‑1 (MQ=255) gTGGAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCGTGCCCGCGaatagc < 2:1683571/150‑5 (MQ=255) gTGGAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAggg < 2:2453287/150‑1 (MQ=255) gTGGAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAggg < 1:1783978/150‑1 (MQ=255) tGGAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGc < 2:775878/150‑1 (MQ=255) ggAGCTGGTGGGGGCTGACGAGCTGATTGTGCATGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGcc < 1:2103420/150‑1 (MQ=255) tggtggCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATc < 1:808859/150‑1 (MQ=255) gtggCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCa < 2:2379475/150‑1 (MQ=255) tggCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAg > 2:1566537/1‑150 (MQ=255) ggtttaCGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGc < 1:2062351/145‑1 (MQ=255) tGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCTCGAAAGCGCCCTACAATCCAGCcac > 2:517302/1‑150 (MQ=255) tGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCcac > 2:1913949/1‑150 (MQ=255) gACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCcaca > 2:1800254/1‑150 (MQ=255) cTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTcc > 1:1320263/1‑150 (MQ=255) cTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTcc > 1:1222510/1‑150 (MQ=255) tGATTGTGCAGGTCGTAGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCt > 1:683185/1‑150 (MQ=255) gATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGGACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCtt < 1:1865765/150‑1 (MQ=255) gCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAggg > 2:750111/1‑118 (MQ=255) gCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAggg < 1:750111/118‑1 (MQ=255) gCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTgg < 2:2063225/150‑1 (MQ=255) aGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCt > 2:1072032/1‑150 (MQ=255) gtcgCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGc > 2:2166303/1‑150 (MQ=255) tGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCtt > 1:961419/1‑150 (MQ=255) tGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCtt < 1:346988/150‑1 (MQ=255) tGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCCGCCGGtt < 2:1173833/150‑1 (MQ=255) tCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCtt < 2:707134/127‑1 (MQ=255) tCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACa < 1:2166303/150‑1 (MQ=255) tCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACa > 2:157059/1‑150 (MQ=255) tCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAAAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCCTCAACa > 1:355725/1‑150 (MQ=255) aaGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGcc > 1:195514/1‑128 (MQ=255) aaGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGcc < 2:195514/128‑1 (MQ=255) aGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTc < 1:1247343/150‑1 (MQ=255) aGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTc < 1:1800254/150‑1 (MQ=255) aGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGCCTGGCGGCTCGCCCAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTc < 2:762084/150‑1 (MQ=255) cAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCCCAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCca < 1:2264567/150‑1 (MQ=255) agCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGTCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACaa < 1:2176740/150‑1 (MQ=255) aCCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGccc > 2:1827461/1‑149 (MQ=255) aCCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCa > 1:381091/1‑150 (MQ=255) aCCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTATAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCa < 1:745967/150‑1 (MQ=255) cccGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAg > 2:1751295/1‑150 (MQ=255) tACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCACGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAAc < 1:770238/150‑1 (MQ=255) gagaCGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACACTCCACAAGCCAGCAAcccc > 2:549513/1‑150 (MQ=255) gCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGTTCCGGCCGCTTCAACAtt < 2:2338414/127‑1 (MQ=255) gCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGTTCCGGCCGCTTCAACAtt > 1:2338414/1‑127 (MQ=255) aGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGaa < 2:1475982/150‑1 (MQ=255) ccTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGaaa < 2:2294150/68‑1 (MQ=255) ccTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGaaa > 1:2294150/1‑68 (MQ=255) ccTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACACTCTCCtt < 2:1913186/97‑1 (MQ=255) ccTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCtt > 1:1913186/1‑97 (MQ=255) cTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCTACTACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACCAGCCCGCCACCCCATCTCGAACAg > 1:748491/1‑150 (MQ=255) tATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCCCGAGAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGc > 1:49015/1‑150 (MQ=255) tCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCcaca > 1:574918/1‑150 (MQ=255) gcggcTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCAtctc < 2:197877/132‑1 (MQ=255) gcggcTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCAtctc > 1:197877/1‑132 (MQ=255) gcggcTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCgg > 1:2222061/1‑150 (MQ=255) ggcTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACa < 1:699960/135‑1 (MQ=255) ggcTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACa > 2:699960/1‑135 (MQ=255) ggcTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCa < 1:1559567/150‑1 (MQ=255) ggcTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCa < 2:1807134/150‑1 (MQ=255) gcTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCAc > 1:205146/1‑150 (MQ=255) tCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAAccc > 2:1576909/1‑121 (MQ=255) tCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTg > 2:2384621/1‑150 (MQ=255) tCGCCAAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAAccc < 1:1576909/121‑1 (MQ=255) gCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGcc > 1:57092/1‑150 (MQ=255) ccGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTc < 1:1010251/95‑1 (MQ=255) cGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAg > 2:636043/1‑150 (MQ=255) ttCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATc < 2:205146/150‑1 (MQ=255) cTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGt < 1:2369489/150‑1 (MQ=255) tAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTc > 1:1235486/1‑150 (MQ=255) aGAACGCATCACGGCTATTCGCGGGCACGCCGGCGAAAGGGCCCTACAATCCAGCGACAATCTCCGTGCCTGGCTCCGGCCGCTTCAACATTCCACATGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCt < 2:49015/150‑1 (MQ=255) gAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTg < 2:1420082/150‑1 (MQ=255) gAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTg > 2:291437/1‑150 (MQ=255) aaCGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGc > 1:941061/1‑150 (MQ=255) aaCGCAACACGCATATGCCCGCGCGCGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGc < 2:1320263/150‑1 (MQ=255) cATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCa < 1:71254/129‑1 (MQ=255) cATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCa > 2:71254/1‑129 (MQ=255) aTCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGaaaa < 1:1566537/150‑1 (MQ=255) tCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGaaaa > 2:2083313/1‑149 (MQ=255) tCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGaaaa < 1:2083313/149‑1 (MQ=255) cGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGAAAAcaca > 1:1894991/1‑150 (MQ=255) ggCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCAc < 2:1393159/112‑1 (MQ=255) ggCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCAc > 1:1393159/1‑112 (MQ=255) ccgaTTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACACTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGAAAACACATc < 2:544244/147‑1 (MQ=255) cTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGAAAACACATcc > 1:1362110/1‑150 (MQ=255) tttCGCGGGCGTGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGAAAACACATCcgg > 1:152855/2‑150 (MQ=255) tttCGCGGGCGTGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGAAAACACATCcgg > 1:1646214/2‑150 (MQ=255) cgcgGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTATACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGAAAACACATCcggcgg < 1:157059/150‑1 (MQ=255) gcgGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCa < 2:441619/121‑1 (MQ=255) gcgGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCa > 1:441619/1‑121 (MQ=255) gcgGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGAAAACACATCCGGCGgt > 2:2228383/1‑150 (MQ=255) gCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGAAAACACATCCGGCGGTGTCa < 1:1913949/150‑1 (MQ=255) gCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGAAAACACATCCGGCGGTGTCa > 1:1779441/1‑150 (MQ=255) | GGAAGAGTGGAAGGTGGAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGAAAACACATCCGGCGGTGTCA > NC_002947/1188893‑1189188 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |