| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,382,332 | A→T | 5.6% | intergenic (+12/+15) | dinB → / ← PP_1204 | DNA polymerase IV/lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,382,332 | 0 | A | T | 5.6% | 326.5 / 4.0 | 108 | intergenic (+12/+15) | dinB/PP_1204 | DNA polymerase IV/lipoprotein |
| Reads supporting (aligned to +/- strand): ref base A (44/57); new base T (3/4); total (47/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 109 total aligned reads displayed.
GACCTGGAGAGTTATCGGCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAGGCTCTGTTCCATTTCACTGGCTTCCTCTT > NC_002947/1382183‑1382477 | gACCTGGAGAGTTATCGGCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCaa < 1:2154472/150‑1 (MQ=255) tGGAGAGTTATCGGCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCa < 2:1077789/150‑1 (MQ=255) tGGAGAGTTATCGGCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTAAGGTTGCGTGACTTGCGGGGCGCGCATGCACAGCTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCa > 1:531826/1‑150 (MQ=255) ggAGAGTTATCGGCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCATGACTTACGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAg > 2:71597/1‑150 (MQ=255) gagaGTTATCGGCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGc > 2:1736728/1‑150 (MQ=255) gagaGTTATCGGCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGc > 2:785670/1‑150 (MQ=255) ttATCGGCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGc < 2:347134/145‑1 (MQ=255) ttATCGGCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGc > 1:347134/1‑145 (MQ=255) tCGGCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTa > 2:2169406/1‑150 (MQ=255) tCGGCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTa < 2:1682942/150‑1 (MQ=255) tCGGCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTa > 1:136744/1‑150 (MQ=255) gCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTa < 2:2108143/150‑1 (MQ=255) gCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTa > 2:2295091/1‑150 (MQ=255) gCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTa > 2:351115/1‑150 (MQ=255) cAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTaa > 1:425238/1‑150 (MQ=255) cAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTaa < 1:1246374/150‑1 (MQ=255) aaaTTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTaa < 2:1541023/149‑1 (MQ=255) aaTTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAAt < 1:547106/150‑1 (MQ=255) aaTTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAAt < 1:2295091/150‑1 (MQ=255) gCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCAc < 2:2102679/150‑1 (MQ=255) gCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTgg > 1:1294798/1‑150 (MQ=255) gCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑cc < 1:614739/150‑1 (MQ=255) gCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑cc < 1:1340406/150‑1 (MQ=255) gTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGc > 1:2335109/1‑150 (MQ=255) gTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGc < 1:254550/150‑1 (MQ=255) gTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGc < 2:1008059/150‑1 (MQ=255) gCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGccacc > 1:705729/1‑150 (MQ=255) ccGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCaa > 1:1438141/1‑150 (MQ=255) cGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAAc < 2:1628505/150‑1 (MQ=255) tGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCg < 2:1294798/150‑1 (MQ=255) gggcggcAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCg < 1:1444005/149‑1 (MQ=255) cggcAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGcc < 2:722603/150‑1 (MQ=255) gcAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAg > 2:2309528/1‑150 (MQ=255) cAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGcctgc < 2:612541/150‑4 (MQ=255) ccGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGcc > 1:1963323/1‑150 (MQ=255) cGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCt < 2:136744/150‑1 (MQ=255) gTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTg < 1:785670/150‑1 (MQ=255) gTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTg < 2:751176/150‑1 (MQ=255) gTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTg > 1:5243/1‑150 (MQ=255) gcgcTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGt < 2:1061326/150‑1 (MQ=255) gcTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTaa < 1:211703/150‑1 (MQ=255) cTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCATTGCAGcccc < 1:2453650/97‑1 (MQ=255) cTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCATTGCAGcccc > 2:2453650/1‑97 (MQ=255) ttGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGc < 1:1736728/150‑1 (MQ=255) gCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTgg < 1:1710574/143‑1 (MQ=255) taggggtaggggTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACt > 1:1635012/1‑150 (MQ=255) ggtaggggtGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAg < 2:1582520/150‑1 (MQ=255) aggggtGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGaa < 1:608373/150‑1 (MQ=255) gggtGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGc > 1:1288878/1‑109 (MQ=255) gggtGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGc < 2:1288878/109‑1 (MQ=255) gAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCctg < 2:1154190/150‑1 (MQ=255) aGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCctgc < 1:2169406/150‑1 (MQ=255) gTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCctgctg > 1:1133198/1‑150 (MQ=255) cGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAt < 1:1112063/94‑1 (MQ=255) cGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAt > 2:1112063/1‑94 (MQ=255) gACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTcc > 1:1188228/1‑150 (MQ=255) aCTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCg > 1:1401326/1‑150 (MQ=255) ttGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGa > 2:2139828/1‑150 (MQ=255) tGCGGGGCGCGCATGAACACTTGCGGCTGTTTCCTCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGAt < 1:57113/150‑1 (MQ=255) gCGGGGCGCGCCTGAACAGTTGGATCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATc < 1:109839/150‑1 (MQ=255) cGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCg < 2:425238/150‑1 (MQ=255) ggCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTg > 2:311296/1‑150 (MQ=255) cgcgcATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCg < 2:1473011/150‑1 (MQ=255) cgcgcATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCg < 2:438272/150‑1 (MQ=255) cgcgcATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCCGCTG‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCg > 1:757816/1‑150 (MQ=255) gcgcATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCgg < 2:767559/150‑1 (MQ=255) gcgcATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCgg < 2:1133198/150‑1 (MQ=255) gcgcATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCgg < 1:351115/150‑1 (MQ=255) aTGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGAAAGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCa > 2:73459/1‑150 (MQ=255) tGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGt < 2:2314489/150‑1 (MQ=255) gAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAg < 1:2317913/113‑1 (MQ=255) aaCAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGCTAAGcc > 2:103691/1‑149 (MQ=255) gAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAgg < 1:2309528/150‑1 (MQ=255) gAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAgg > 2:202831/1‑150 (MQ=255) cTGTTTCCGCCCAAATGAGAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGt < 2:390826/134‑1 (MQ=255) cTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGt > 1:390826/1‑134 (MQ=255) tGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAGGcacc < 2:1401326/150‑4 (MQ=255) gCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGTACTCCTGCTGCAGCTCCGGATCGTTGCCGATCAGCTCGATCAGGCTCTCTTCCAt > 2:609838/1‑150 (MQ=255) gCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAGGCTCTGTTCCAt < 2:705729/150‑1 (MQ=255) cccAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAGGCTCTTTTCCAtt > 1:37449/1‑150 (MQ=255) aaaTGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACCCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAGGCTCTGTTCCATTTCa < 2:305267/150‑1 (MQ=255) aaTGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAg > 2:958162/1‑88 (MQ=255) aaTGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAg < 1:958162/88‑1 (MQ=255) aaaGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAGGCTCTGTTCCATTTCACTGGc > 1:430650/1‑150 (MQ=255) aaGGGGCTGCATTGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGaa > 2:2398805/1‑86 (MQ=255) aaGGGGCTGCATTGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGaa < 1:2398805/86‑1 (MQ=255) aaGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCct < 2:842340/91‑1 (MQ=255) aaGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCct > 1:842340/1‑91 (MQ=255) ggggCTGCATTGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCgg < 2:1681463/112‑1 (MQ=255) ggggCTGCATTGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCgg > 1:1681463/1‑112 (MQ=255) ggggCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCCCGCTCTGTTCCATCTCACTGGCTTc > 2:1582462/1‑150 (MQ=255) gggCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAGGCTCTGTTCCATTTCACTGGCTTcc > 1:250392/1‑150 (MQ=255) ggCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAGGCTCTGTTCCATTTCACTGGCTTCct < 1:311296/150‑1 (MQ=255) gCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAGGCTCTGTTCCATTTCACTGGCTTCctc < 2:370644/150‑1 (MQ=255) tGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAGGCTCTGTTCCATTTCACTGGCTTCCTCtt < 1:1800518/150‑1 (MQ=255) tGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAGGCTCTGTTCCATTTCACTGGCTTCCTCtt < 2:2335109/150‑1 (MQ=255) cAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCgg > 2:2144508/1‑105 (MQ=255) cAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCgg < 1:2144508/105‑1 (MQ=255) cAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAgg > 1:2056037/1‑120 (MQ=255) cAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAgg < 2:2056037/120‑1 (MQ=255) | GACCTGGAGAGTTATCGGCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGAT‑‑‑CCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAGGCTCTGTTCCATTTCACTGGCTTCCTCTT > NC_002947/1382183‑1382477 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |