| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,509,433 | T→G | 6.8% | H110P (CAT→CCT) | PP_1324 ← | endonuclease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,509,433 | 0 | T | G | 6.8% | 227.8 / 5.0 | 83 | H110P (CAT→CCT) | PP_1324 | endonuclease |
| Reads supporting (aligned to +/- strand): ref base T (38/38); new base G (4/2); total (42/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.70e-01 | |||||||||||
CATGTCCATCTGGTGACCTTAAATGGGGCGGTGGCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGATACTGTCGAGAGCGCCTCCGAAGCCCGCGTG > NC_002947/1509292‑1509581 | cATGTCCATCTGGTGACCTTAAATGGGGCGGTGGCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGGCTGCGTGGTGGCTa > 1:472219/1‑150 (MQ=255) gTCCATCTGGTGACCTTAAATGGGGCGGTGGCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTAccc < 2:1801597/150‑1 (MQ=255) cATCTGGTGACCTTAAATGGGGCGGTGGCCTTTGCTACTCGCAACAACGACCAACCCGCGATACATAGGGC‑AAAAAAAACGAAGAGATTTCCGCATT‑TGAAGGCGTGTTTCCGCAAGAGAAGCGGTCTGCCTGAATGGGGGATACCCTgt > 2:1073486/1‑149 (MQ=255) tCTGGTGACCTTAAATGGGGCGGTGGCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAg < 2:84655/150‑1 (MQ=255) tGGTGACCTTAAATGGGGCGGTGGCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAggg < 1:986616/150‑1 (MQ=255) gTGACCTTAAATGGGGCGGTGGCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGC‑AAAAAAAACGGAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCg > 1:2127307/1‑150 (MQ=255) cTTAAATGGGGCGGTGGCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCAc < 1:2159771/150‑1 (MQ=255) cTTAAATGGGGCGGTGGCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGGTTGTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCGGGGCGACCAc > 1:908505/1‑150 (MQ=255) cTTAAATGGGGCGGTGGCCTTTGCTACGCGCAAAAAAGCTTTGATGGAGCGGCACAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGGTGTTAAGCCATGAAAGCGGTCGGGCAGCAGCGGGGCTACCCTGCAGGGCGACCAc > 1:1615604/1‑150 (MQ=255) ttAAATGGGGCGGTGGCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACg > 2:1824265/1‑150 (MQ=255) tAAATGGGGCGGTGGCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGC‑AAAAAAAACGAAGGGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGt > 2:1751449/1‑150 (MQ=255) gggCGGTGGCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTAcc < 2:2369313/127‑1 (MQ=255) gggCGGTGGCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTAcc > 1:2369313/1‑127 (MQ=255) gCGGTGGCCTCTGTTTCGCGTAACAACGACCAGCCCGCGATACATAGAGC‑AAAACAAACGAAGTAGTGTTAGGTTT‑CGAAGGCGTTTTTCAGACCTTGAAACGATATCCCTGTCCGTTGGCTACCCTGCAGGGCGACCACGTCGAAGCgg < 1:1751449/150‑1 (MQ=255) cGGTGGCATTTGACACGCGCAACAACGACCAGCCCGCGATACATAGAGC‑AAAAATAACGAAGTGGGTTCACCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGACGCGGc < 1:1073486/150‑1 (MQ=255) gTGGCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCAtggtg < 1:1216592/116‑1 (MQ=255) gTGGCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCAtggtg > 2:1216592/1‑116 (MQ=255) tGGCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAgg < 1:471423/150‑1 (MQ=255) gCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAgggg < 1:1956498/150‑1 (MQ=255) ccTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGt > 1:1414149/1‑150 (MQ=255) tttGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGTAAGTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAg < 1:289167/150‑1 (MQ=255) tttGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTc < 2:337072/134‑1 (MQ=255) tttGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTc > 1:337072/1‑134 (MQ=255) tttGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGC‑‑AAAAAAACGAAGTGGGTTCAGCATT‑CGAGGGCGTTTTTCGGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGt > 2:271507/1‑150 (MQ=255) tttGCTACGCGCAACAACGACAAGCCCGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAg < 2:2345192/150‑1 (MQ=255) actggggcAACAACGACCAGCCCGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACTACGTCGAAGCGGCAGGGGTAGTTGc > 2:1193377/7‑150 (MQ=255) tACGCGCAACAACGACCAGCCCGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCAtggt < 2:1339411/104‑1 (MQ=255) tACGCGCAACAACGACCAGCCCGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCAtggt > 1:1339411/1‑104 (MQ=255) cgcgCAACAACGACCAGCCCGCGATACATAGAGC‑AAAAACAACGACGTGGCCTCAGCCTTACCCATG‑GTGTATCGGGCCTTAAAGCGGTCGGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGcccc < 1:168795/150‑1 (MQ=255) gcgaAACAACGACCAGCCCGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGCTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCa > 2:1053963/1‑150 (MQ=255) gcAACAACGACCAGCCCGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGt < 2:1479840/150‑1 (MQ=255) gcAACAACGACCAGCCCGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGt < 1:1193377/150‑1 (MQ=255) caacaaCGACCAGCCCGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTg < 1:2223919/150‑1 (MQ=255) aaacaacGACCAGCCCGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCTAGTg < 2:1897779/149‑1 (MQ=255) acGACCAGCCCGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCa > 2:2087155/1‑105 (MQ=255) acGACCAGCCCGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCa < 1:2087155/105‑1 (MQ=255) gACCAGCCCGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCa > 2:892753/1‑140 (MQ=255) gACCAGCCCGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCa < 1:892753/140‑1 (MQ=255) ccAGCCCGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCtt < 1:2007059/150‑1 (MQ=255) cccGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGc > 2:1844548/1‑150 (MQ=255) ccGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCa < 1:2416290/150‑1 (MQ=255) cATAGAGCAAAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAg < 1:569759/150‑1 (MQ=255) cATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAgg < 1:2212618/150‑1 (MQ=255) aTAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAggg > 2:479339/1‑150 (MQ=255) aTAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAggg > 2:122023/1‑150 (MQ=255) aTAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCGCCTTCTGCAGGAACAggg > 1:121076/1‑150 (MQ=255) gC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTggcg < 1:2057034/150‑1 (MQ=255) aaaaaaCGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCaa < 1:1844548/150‑1 (MQ=255) aaaaCGACGTGGGTTCAGCAAG‑CGAATGGGGTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGATTCGCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGc < 1:1732027/150‑1 (MQ=255) gAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGa < 1:809907/77‑1 (MQ=255) gAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCAGGGTGGCTACCCTGCAGGGCGa > 2:809907/1‑77 (MQ=255) gTGGGTTCAGCATT‑CGAAGGCGTTTTTTTTCTTTTTTAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCg > 2:485572/1‑150 (MQ=255) gTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCg > 2:1644340/1‑150 (MQ=255) ttCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCt > 2:93109/1‑150 (MQ=255) ttCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCt > 1:398219/1‑150 (MQ=255) gCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCtt > 1:1691450/1‑150 (MQ=255) cATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCTCCAGTgg > 2:213468/1‑99 (MQ=255) cATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCTCCAGTgg < 1:213468/99‑1 (MQ=255) aaGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCg > 1:737960/1‑150 (MQ=255) gCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGGGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCg > 2:1679975/1‑150 (MQ=255) tttttCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGATa < 2:2127307/150‑1 (MQ=255) tttttCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGATa < 1:1824265/150‑1 (MQ=255) aGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGc < 2:512715/83‑1 (MQ=255) aGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGc > 1:512715/1‑83 (MQ=255) gCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGTACAGGGTGGCGGCAAGCACCACACGTTTCTTCTTGCGCCCGTCGATACTGTCga > 2:896064/1‑150 (MQ=255) gCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGATACTGTCga < 1:271507/150‑1 (MQ=255) gCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGATACTGTCga > 1:1964529/1‑150 (MQ=255) ccATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGATACTGTCgag > 1:1677397/1‑150 (MQ=255) cATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGATACTGTCgaga > 1:2363469/1‑150 (MQ=255) ttGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGt < 2:1899480/74‑1 (MQ=255) ttGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGt > 1:1899480/1‑74 (MQ=255) aaGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGATACTGTCGAGAGCGcc < 1:2419295/150‑1 (MQ=255) gtcgccctgcAGGGTAGCCACCATGCAGGCAGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGATACTGTCga < 2:2019672/133‑1 (MQ=38) gtcgccctgcAGGGTAGCCACCATGCAGGCAGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGATACTGTCga > 1:2019672/6‑138 (MQ=38) tCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGATACTGTCGAGAGCGCCTCCGaa < 1:1422142/150‑1 (MQ=255) cctgcATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAg < 1:1288986/77‑1 (MQ=255) cctgcATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAg > 2:1288986/1‑77 (MQ=255) ctgcATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGATACTGTCGAGAGCGCCTCCGACGCCcg > 2:1363615/1‑150 (MQ=255) ctgcATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGATACTGTCGAGAGCGCCTCCGAAGCCcg > 1:2352442/1‑150 (MQ=255) ctgcAGGGTAGCCACCATGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTggcg > 2:570088/1‑89 (MQ=38) ctgcAGGGTAGCCACCATGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTggcg < 1:570088/89‑1 (MQ=38) tgcATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGATACTGTCGAGAGCGCCTCCGAAGCCcgc < 2:1677397/150‑1 (MQ=255) cATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTc > 2:680571/1‑118 (MQ=255) cATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTc < 1:680571/118‑1 (MQ=255) cATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGATACTGTCGAGAGCGCCTCCGAAGCCCGCGt < 2:398219/150‑1 (MQ=255) cATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGATACTGTCGAGAGCGCCTCCGAAGCCCGCGt > 2:238252/1‑150 (MQ=255) aTGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGATACTGTCGAGAGCGCCTCCGAAGCCCGCGTg > 2:1635624/1‑150 (MQ=255) | CATGTCCATCTGGTGACCTTAAATGGGGCGGTGGCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGC‑AAAAAAAACGAAGTGGGTTCAGCATT‑CGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGATACTGTCGAGAGCGCCTCCGAAGCCCGCGTG > NC_002947/1509292‑1509581 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |