| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,557,402 | C→G | 9.3% | G271G (GGG→GGC) | PP_1368 ← | glycosyltransferase domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,557,402 | 0 | C | G | 9.3% | 321.6 / 19.8 | 107 | G271G (GGG→GGC) | PP_1368 | glycosyltransferase domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base C (47/50); new base G (5/5); total (52/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.74e-01 | |||||||||||
Only 100 of 107 total aligned reads displayed.
GGACGTCCCAGCAGGCACACAAACACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGCTGTAGCGCAGTCCCCAGTGGATGCAG > NC_002947/1557256‑1557546 | ggACGTCCCAGCAGGCACACAAACACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCg > 1:1929851/1‑150 (MQ=255) cagcagGCACACAAACACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCgccgcc > 2:2220131/1‑150 (MQ=255) cagGCACACAAACACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAgg < 2:1296456/150‑1 (MQ=255) cagGCACACAAACACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAgg < 1:2030838/150‑1 (MQ=255) ggCACACAAACACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGgca > 1:2251036/1‑150 (MQ=255) ggCACACAAACACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTACCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGgca < 2:1157697/150‑1 (MQ=255) cacacaAACACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCAGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCGCCGGGgccgccgaactga < 2:2431716/150‑8 (MQ=255) caAACACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGAc < 1:78910/150‑1 (MQ=255) aaaCACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACt > 2:307577/1‑150 (MQ=255) aaaCACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACt > 2:505973/1‑150 (MQ=255) ccGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTGACCAGGCGGGCCGACTTCACTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAAtt < 1:2127854/150‑1 (MQ=255) ccGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAAtt > 2:2234918/1‑150 (MQ=255) cGGCCCCCCAGCCAGCAGATAAAATTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTg < 2:1210602/150‑1 (MQ=255) ccccAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCCAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGCCCCCGGCGCCCCCACGCAGCAAACTGAATTGGCCgg > 2:1077408/1‑150 (MQ=255) cccAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGgc > 1:365417/1‑150 (MQ=255) ccagccagCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGgcg > 1:731551/1‑150 (MQ=255) cagccagcAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGgcgc > 1:1170989/1‑150 (MQ=255) cagccagcAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTCACGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGgcgc < 1:1729573/150‑1 (MQ=255) ccagcAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGgc > 1:1468480/1‑115 (MQ=255) ccagcAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGgc < 2:1468480/115‑1 (MQ=255) cagcagATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAg < 1:1177159/150‑1 (MQ=255) agcagATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCACGGCCTGCGACAGGCTGGCCGACGTCAGTTTGACCATGCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGc > 1:534593/1‑150 (MQ=255) agcagATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGc > 2:857406/1‑150 (MQ=255) agcagATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGc > 2:720455/1‑150 (MQ=255) gcagATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCg < 1:2234918/150‑1 (MQ=255) aTAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAg > 2:1612682/1‑150 (MQ=255) aaaaGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCa < 2:1170989/150‑1 (MQ=255) aaaGTACGACGTAGCCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGTCGCTGAGCGACAGCAt < 2:754271/150‑1 (MQ=255) aaGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGcttt < 1:1902421/150‑4 (MQ=255) aaGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATc > 2:146077/1‑150 (MQ=255) aaGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATc < 1:1499523/150‑1 (MQ=255) aaGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATc < 2:731551/150‑1 (MQ=255) aaGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCACCTGCGGTCGAGATGCCCACCAAGTGTGTCAACAGGCTGGCCGACGTCAGTTCGACGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCGGAGCGACAGCATc > 1:647653/1‑150 (MQ=255) gTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTg < 1:811156/150‑1 (MQ=255) tAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTggtt < 1:1264537/128‑3 (MQ=255) tAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGc > 1:715051/1‑150 (MQ=255) tAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGc < 2:2251036/150‑1 (MQ=255) tAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGAGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGcc > 2:1264537/1‑128 (MQ=255) cGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCGGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAg < 1:2354737/150‑1 (MQ=255) aCCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAg < 1:1989606/150‑1 (MQ=255) gcccgccATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTg < 2:266087/150‑1 (MQ=255) cccgccATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTgg < 1:1226838/150‑1 (MQ=255) cccgccATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTgg < 2:1606748/150‑1 (MQ=255) gccATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGaa > 2:1982325/1‑150 (MQ=255) gccATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGaa < 1:1612682/150‑1 (MQ=255) ccATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAAt < 1:857406/150‑1 (MQ=255) cAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTg > 1:1502991/1‑150 (MQ=255) ggATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCa > 2:2256595/1‑150 (MQ=255) gATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAg < 1:720455/150‑1 (MQ=255) tGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTc < 1:1364192/150‑1 (MQ=255) gCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCt < 1:2299331/150‑1 (MQ=255) ccGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTa > 1:2261085/1‑150 (MQ=255) gCAGCTGCTGGCGCGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGGTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTAcc < 1:1077408/150‑1 (MQ=255) gCAGCTGCGGTCGAGCTGCCCATCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTAcc < 2:412531/150‑1 (MQ=255) cTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCa > 2:251931/1‑150 (MQ=255) tGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGGCTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCaa > 1:2213333/1‑150 (MQ=255) gAGCTGCCCACCAAGGGTATCAACAGGCTGGCCGACGTCAGTTCNGCGGNCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCgc > 1:327665/1‑150 (MQ=255) gCTGCCCACCAAGGGTGTCGACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCgcag > 1:1976500/1‑150 (MQ=255) gCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCgcag > 2:1198605/1‑150 (MQ=255) tGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCgcagca > 2:590806/1‑150 (MQ=255) ccaccaAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCa > 1:485587/1‑150 (MQ=255) caccaAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAg < 1:2032481/90‑1 (MQ=255) caccaAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAg > 2:2032481/1‑90 (MQ=255) caccaAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAg < 2:1929851/150‑1 (MQ=255) accaAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAgg > 2:1340956/1‑150 (MQ=255) caAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTa > 1:1474065/1‑150 (MQ=255) gggTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGCAGCTGGGAATCCAGTGCAGGTCTCCCCCCAAGCCCCGCAGCACCAGGTACaa < 2:2364873/150‑1 (MQ=255) gggTGGCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGTTCTACAGCATCTGGACGAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCACGCCCCGCAGCACCCGGTACaa < 2:530252/150‑1 (MQ=255) gtCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACg < 1:505973/150‑1 (MQ=255) tCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGc > 1:614802/1‑150 (MQ=255) tCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGc < 1:1198605/150‑1 (MQ=255) aaCAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGGCTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGCTg < 2:2213333/150‑1 (MQ=255) aaCAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGCTg > 2:1585528/1‑150 (MQ=255) aCAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAGTTGGCGGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGCTGt > 2:474493/1‑150 (MQ=255) cAGGCTGGCCGGCGTCAGTTCGGCGGCCCCGGCGCCGCCCGGCAGCAGACTGAATTGGCCGGCGCTGAGCGCCTTCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGCTGTa < 1:1982325/150‑1 (MQ=255) cAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGCTGTa < 2:614802/150‑1 (MQ=255) aGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCAt < 1:847873/77‑1 (MQ=255) aGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCAt > 2:847873/1‑77 (MQ=255) aGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGCTGTAg < 1:312906/150‑1 (MQ=255) gCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGCTGTAgcg > 2:1152045/1‑150 (MQ=255) tGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTgg > 2:833827/1‑90 (MQ=255) tGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTgg < 1:833827/90‑1 (MQ=255) ccGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGCTGTAGCGCAGTc < 1:1585528/150‑1 (MQ=255) gACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGCTGTAGCGCAGNccc < 2:1502991/150‑1 (MQ=255) gACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCACGCAGCACCAGGTACAAGACGCTGTAGCGCAGTccc > 2:289049/1‑150 (MQ=255) aCGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGAATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGCTGTAGCGCAGTcccc < 1:166542/150‑1 (MQ=255) tCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGc > 1:1117625/1‑132 (MQ=255) tCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGc < 2:1117625/132‑1 (MQ=255) tCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGCTGTAGCGCAGTCCCCAGt < 1:1169701/150‑1 (MQ=255) cAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGCTGTAGCGCAGTCCCCAGTg > 1:1685908/1‑150 (MQ=255) ttCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGCTGTAGCGCAGTCCCCAGTGGAt > 1:442670/1‑150 (MQ=255) ctggcggcGCCGGGGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAAt < 2:166265/78‑1 (MQ=255) ctggcggcGCCGGGGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAAt > 1:1352788/3‑80 (MQ=255) ctggcggcGCCGGGGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAAt > 1:166265/3‑80 (MQ=255) ctggcggcGCCGGGGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAAt < 2:1352788/78‑1 (MQ=255) ctggcggcGCCGGGGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGCt < 1:2156253/126‑1 (MQ=255) ctggcggcGCCGGGGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGCt > 2:2156253/3‑128 (MQ=255) tggcggcGCCGGGGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAg < 1:1433562/87‑1 (MQ=255) tggcggcGCCGGGGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAg > 2:1433562/2‑88 (MQ=255) gcggcCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGCTGTAGCGCAGTCCCCAGTGGATGCAg < 2:534593/150‑1 (MQ=255) | GGACGTCCCAGCAGGCACACAAACACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGCTGTAGCGCAGTCCCCAGTGGATGCAG > NC_002947/1557256‑1557546 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |