| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,637,349 | A→G | 7.9% | intergenic (+16/+50) | pdxJ → / ← PP_1437 | pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,637,349 | 0 | A | G | 7.9% | 317.0 / 11.1 | 112 | intergenic (+16/+50) | pdxJ/PP_1437 | pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase |
| Reads supporting (aligned to +/- strand): ref base A (44/58); new base G (4/5); total (48/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.74e-01 | |||||||||||
Only 100 of 115 total aligned reads displayed.
GGTGGCGGCGATCAAGGGTATCAATGAGTTGAACATTGGCCATGCGCTGGTGGCGCATGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCGGGTAGGCCCCAGGGGGCAGCTGCTGACCTCGACCCGCCCGCCATGCAACTGCATGATCGACTTCACGATC > NC_002947/1637207‑1637498 | ggTGGCGGCGATCAAGGGTATCAATGAGTTGAACATTGGCCATGCGCTGGTGGCGCATGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCt < 1:2067634/150‑1 (MQ=255) ggcgATCAAGGGTATCAATGAGTTGAACATTGGCCATGCGCTGGTGGCGCATGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTcgc > 1:1218138/1‑150 (MQ=255) cgATCAAGGGTATCAATGAGTTGAACATTGGCCATGCGCTGGTGGCGCATGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCgg < 1:362559/150‑1 (MQ=255) gATCAAGGGTATCAATGAGTTGAACATTGGCCATGCGCTGGTGGCGCATGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCggg > 1:1398882/1‑150 (MQ=255) gggTATCAATGAGTTGAACATTGGCCATGCGCTGGTGGCGCATGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCC‑‑GTTGAAGTCACTCTCATGTTTGCGGCTTCGCGATGCTCGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGcc > 1:1862592/1‑150 (MQ=255) cAATGAGTTGAACATTGGCCATGCGCTGGTGGCGCATGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGaa < 1:1367467/150‑1 (MQ=255) aTGAGTTGAACATTGGCCATGCGCTGGTGGCGCATGCCTTGTTTGTCGGCTTCGAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCCTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGcc > 2:1849379/1‑142 (MQ=255) aTGAGTTGAACATTGGCCATGCGCTGGTGGCGCATGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAaga < 1:730132/150‑1 (MQ=255) aTGAGTTGAACATTGGCCATGCGCTGGTGGCGCATGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAaga < 1:1038958/150‑1 (MQ=255) aTGAGTTGAACATTGGCCATGCGCTGGTGGCGCATGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCGaaaa < 2:753733/150‑3 (MQ=255) aTGAGTTGAACATTGGCCATGCGCTGGTGGCGCATGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCCGCCTTTTCCCGGGCAAGCCCGCGCaga > 2:1038958/1‑150 (MQ=255) tGAGTTGAACATTGGCCATGCGCTGGTGGCGCATGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAagag > 1:960530/1‑150 (MQ=255) gAGTTGAACATTGGCCATGCGCTGGTGGCGCCTGCCTTGTTTGTCGGTTCCAGCACGGCTGGGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAgg < 2:1244676/150‑1 (MQ=255) gAGTTGAACATTGGCCATGCGCTGGTGGCGCATGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAgg < 1:504279/150‑1 (MQ=255) gAGTTGAACATTGGCCATGCGCTGGTGGCGCATGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGCCGCCTGTGCTGGCCTCTTCGCGGGCTTGCCCGCGAAAAgg < 2:2440935/150‑1 (MQ=38) aGTTGAACATTGGCCATGCGCTGGTGGCGCATGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGc < 1:2137658/150‑1 (MQ=255) ttGAACATTGGCCATGCGCTGGTGGCGCATGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCa < 1:483740/150‑1 (MQ=255) ttGAACATTGGCCATGCGCTGGTGGCGCATGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCa < 1:254890/150‑1 (MQ=255) tGAACATTGGCCATGCGCTGGTGGCGCATGCGTGGTGTGTCGGCGTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGGGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGCGGCCAg < 2:493187/150‑1 (MQ=255) aaCATTGGCCATGCGCTGGTGGCGCATGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGca < 2:960530/150‑1 (MQ=255) aTTGGCCATGCGCTGGTGGCGCATGCCTTGTTTGTCGGCTTCAAGGCTGGTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGCCGCCTGTGCTGGCCTCTTCGCGGGCTTGCCCGCGAAAAGGCCGGTACAg > 2:1046645/1‑150 (MQ=25) aTTGGCCATGCGCTGGTGGCGCATGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCGAAAAgg < 1:1401021/141‑1 (MQ=255) ccATGCGCTGGTGGCGCATGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAggcggc < 2:1791401/150‑1 (MQ=255) ccATGCGCTGGTGGCGCATGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAggaggc > 1:403064/1‑150 (MQ=255) ccATGCGCTGGTGGCGCATGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGCCGCCTGTGCTGGTCTCTTCGCTTTCTTGCCCGCGAAAAGGCCGGTACAggcgac < 1:1046645/150‑3 (MQ=25) cATGCGCTGGTGGCGCGTGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGACGCCAGCACTGGCGGcc > 2:1224117/1‑150 (MQ=255) cgcTGGTGGCGCATGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCNATc < 2:1503247/150‑1 (MQ=255) tggtggCGCATGCCTTGTTTGTCGGCTAAATGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACt > 1:1024024/1‑150 (MQ=255) tggCGCATGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCgg < 1:1154811/150‑1 (MQ=255) ggCGCATGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCggg < 1:123559/108‑1 (MQ=255) ggCGCATGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCggg > 2:123559/1‑108 (MQ=255) gcgcATGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCa < 2:2347205/150‑1 (MQ=255) cgcATGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAg < 1:1160394/150‑1 (MQ=255) gcATGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCGAaaag > 1:1830016/1‑120 (MQ=39) gcATGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCGAaaag < 2:1830016/120‑1 (MQ=39) cATGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAggc < 2:403064/150‑2 (MQ=255) tGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGaaa > 1:1112380/1‑150 (MQ=255) tGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGaaa > 2:2109854/1‑150 (MQ=255) cTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAacac < 1:2267949/150‑1 (MQ=255) cTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAacac > 1:607784/1‑150 (MQ=255) ttgtttgtCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCcgc < 1:893581/107‑1 (MQ=255) ttgtttgtCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCcgc > 2:893581/1‑107 (MQ=255) ttgtttgtCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGc < 1:1998342/115‑1 (MQ=255) ttgtttgtCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGc > 2:1998342/1‑115 (MQ=255) gtttgtCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAg < 2:2070435/150‑1 (MQ=255) gtttgtCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAg < 1:1703909/150‑1 (MQ=255) tCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGCCGCCTGTGCTGGCCTCTTCGCGGGCTTGCCcgc > 2:1406197/1‑100 (MQ=25) cGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTaaa < 2:689299/150‑1 (MQ=255) ggCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAAc > 2:2066427/1‑150 (MQ=255) ttCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCa < 1:1397648/129‑1 (MQ=255) ttCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCa > 2:1397648/1‑129 (MQ=255) ttCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCgg < 1:74856/150‑1 (MQ=255) ttCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCgg > 1:587200/1‑150 (MQ=255) ttCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCgg > 1:1043203/1‑150 (MQ=255) ttCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCgg > 1:1680739/1‑150 (MQ=255) tCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCggg < 1:2109854/150‑1 (MQ=255) tCAAGGCGGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCggg < 2:1566056/150‑1 (MQ=255) aaGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCggg < 1:1627269/83‑1 (MQ=255) aaGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCggg > 2:1627269/1‑83 (MQ=255) aaGGCTGCTGTGGCCGAGATGAAC‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCGGGTa < 1:1052165/150‑1 (MQ=255) gctgctGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCGGGTAGGc < 1:2066427/150‑1 (MQ=255) gtgGCCGAGATGAAG‑‑GCGCTGGTCGTGGCGGCTTCGCGCTTATTCTTGGTCGCCTGTAGCAGTGCGTCCACACGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCGGGTAGGCCCCAgg < 1:1224117/150‑1 (MQ=255) gCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGa > 1:1605778/1‑82 (MQ=255) gCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGa < 2:1605778/82‑1 (MQ=255) gCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAggcgg < 1:799740/100‑1 (MQ=255) gCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAggcgg > 2:799740/1‑100 (MQ=255) ccGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCGGGTAGGCCCCAGGGGGc > 2:220442/1‑150 (MQ=255) gagaTGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTa < 2:1814279/126‑1 (MQ=255) gagaTGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTa > 1:1814279/1‑126 (MQ=255) gaTGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCGGGTAGGCCCCAGGGGGCAgct > 2:2278890/1‑150 (MQ=255) gaTGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCGGGTAGGCCCCAGGGGGCAgct > 2:2278314/1‑150 (MQ=255) aTGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCGGGTAGGCCCCAGGGGGCAgctg < 1:316000/150‑1 (MQ=255) tGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCGGGTAGGCCCCAGGGGGCAgctgc < 2:1680739/150‑1 (MQ=255) aaG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCGGGTAGGCCCCAGGGGGCAGctgctg > 2:139502/1‑150 (MQ=255) aaG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCGGGTAGGCCCCAGGGGGCAGctgctg < 1:2278890/150‑1 (MQ=255) aaG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCGGGTAGGCCCCAGGGGGCAGctgctg < 1:2278314/150‑1 (MQ=255) g‑‑gCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCGGGTAGGCCCCAGGGGGCAGCTGCTGAc > 2:734531/1‑150 (MQ=255) g‑‑gCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCGGGTAGGCCCCAGGGGGCAGCTGCTGAc > 1:2053200/1‑150 (MQ=255) cgcTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCGGGTAGGCCCCAGGGGGCAGCTGCTGACCt < 1:1067883/150‑1 (MQ=255) tggtCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCGGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCGGGTAGGCCCCAGGGGGCAGCTGCTGACCTCGa < 1:194025/147‑1 (MQ=255) tCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGa > 1:1338902/1‑85 (MQ=255) tCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGa < 2:1338902/85‑1 (MQ=255) tGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCGGGTAGGCCCCAGGGGGCAGCTGCTGACCTCGAcccgcc < 2:1849223/150‑1 (MQ=255) tGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCGGGTAGGCCCCAGGGGGCAGCTGCTGACCTCGAcccgcc < 2:1398882/150‑1 (MQ=255) gcggcTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTTTTTTGTTTTCCCGCGAAGAGGCCAGCCCAGGCGGCCAATCACTCGGCAGGAAACACCAGGGTAAACCGGGTAGGCCCCAGGGGGCAGCTGCTGACCTCGCcccgcccg > 2:341326/1‑150 (MQ=255) ggcTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCGGGTAGGCCCCAGGGGGCAGCTGCTGACCTCGACCcgcccgcc > 1:1389823/1‑150 (MQ=255) aTTGTTGGCCCCCTGTTCCGGCTTCTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCGGGTAGGCCCCAGGGGGCAGCTGCTGACCTCGACCCGCCCGCCATGCAACTGCAt < 1:2250699/150‑1 (MQ=255) ttgttgGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAgg > 2:389975/1‑77 (MQ=255) ttgttgGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAgg < 1:389975/77‑1 (MQ=255) gttgGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCGGGTAGGCCCCAGGGGGCAGCTGCTGACCTCGACCCGCCCGCCATGCAACTGCATGAt > 1:1757146/1‑150 (MQ=255) ttgGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCGGGTAGGCCCCAGGGGGCAGCTGCTGACCTCGACCCGCCCGCCATGCAGTTGCATggcg < 2:1043203/150‑4 (MQ=255) tcggccGCCTGTGCTGGCCTCTTCGCGGGCTTGCCCGCGAAAAGGCCGGTACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCGGGTAGGCCCCAGGGGACAGCTGCTGACCTCGACCCGCCCGCCa < 2:1036244/130‑1 (MQ=18) tcggccGCCTGTGCTGGCCTCTTCGCGGGCTTGCCCGCGAAAAGGCCGGTACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCGGGTAGGCCCCAGGGGACAGCTGCTGACCTCGACCCGCCCGCCa > 1:1036244/6‑135 (MQ=18) gCCTGTGCTGGCCTCTTCGCGGGCTTGCCCGCGAAAAGGCCGGTACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCGGGTAGGCCCCAGGGGGCAGCTGCTGACCTCGACCCGCCCGCCATGCAACt > 1:1135473/1‑136 (MQ=25) gCCTGTGCTGGCCTCTTCGCGGGCTTGCCCGCGAAAAGGCCGGTACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCGGGTAGGCCCCAGGGGGCAGCTGCTGACCTCGACCCGCCCGCCATGCAACt < 2:1135473/136‑1 (MQ=25) gCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCGGGTAGGCCCCAGGGGGCAGCTGCTGACCTCGACCCGCCCGCCATGCAACTGCATGATCGACTTc > 1:2210909/1‑150 (MQ=255) ccTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCGGGTAGGCCCCAGGGGGCAGCTGCTGACCTCGACCCGCCCGCCATGCAACTGCATGATCGACTTCa > 2:1789699/1‑150 (MQ=255) cTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCGGGTAGGCCCCAGGGGGCAGCTGCTGACCTCGACCCGCCCGCCATGCAACTGCATGATCGACTTCAc > 2:561778/1‑150 (MQ=255) aCCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCGGGTAGGCCCCAGGGGGCAGCTGCTGACCTCGACCCGCCCGCCATGCAACTGCATGATCGACTTCACGATc < 2:1112380/150‑1 (MQ=255) aCCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCGGGTAGGCCCCAGGGGGCAGCTGCTGACCTCGACCCGCCCGCCATGCAACTGCATGATCGACTTCACGATc < 2:1584577/150‑1 (MQ=255) | GGTGGCGGCGATCAAGGGTATCAATGAGTTGAACATTGGCCATGCGCTGGTGGCGCATGCCTTGTTTGTCGGCTTCAAGGCTGCTGTGGCCGAGATGAAG‑‑GCGCTGATCGTGGCGGCTTCGCGCTGATTGTTGGTCGCCTGTACCGGCCTTTTCGCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCGGCCGATCACTCGGCAGGAAACACCAGGGTAAACCGGGTAGGCCCCAGGGGGCAGCTGCTGACCTCGACCCGCCCGCCATGCAACTGCATGATCGACTTCACGATC > NC_002947/1637207‑1637498 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |