| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,668,470 | G→A | 5.3% | intergenic (+53/‑129) | ffh → / → rpsP | signal recognition particle GTPase subunit/30S ribosomal protein S16 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,668,470 | 0 | G | A | 5.3% | 279.7 / 4.3 | 94 | intergenic (+53/‑129) | ffh/rpsP | signal recognition particle GTPase subunit/30S ribosomal protein S16 |
| Reads supporting (aligned to +/- strand): ref base G (48/41); new base A (3/2); total (51/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.17e-01 | |||||||||||
GATGAAGAAGTTTTCTGCCAAAGGCGGCATGGCCAAGATGATGCGCGGCCTCGGTGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTGGGCACCCGTGTGCCTATTTGGCATTCA > NC_002947/1668327‑1668618 | gatgaAGAAGTTTTCTGCCAAAGGCGGCATGGCCAAGATGATGCGCGGCCTCGGTGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCgg < 1:108787/150‑1 (MQ=255) gTTTTCTGCCAAAGGCGGCATGGCCAAGATGATGCGCGGCCTCGGTGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTACAGCgggggttctgg < 2:2304370/150‑8 (MQ=255) cTGCCAAAGGCGGCATGGCCAAGATGATGCGCGGCCTCGGTGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGa > 1:779420/1‑150 (MQ=255) tGCCAAAGGCGGCATGGCCAAGATGATGCGCGGCCTCGGTGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGaa < 2:1954168/150‑1 (MQ=255) ccAAAGGCGGCATGGCCAAGATGATGCGCGGCCTCGGTGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAAtt > 2:2244327/1‑150 (MQ=255) ccAAAGGCGGCATGGCCAAGATGATGCGCGGCCTCGGTGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAAtt > 2:1002106/1‑150 (MQ=255) aaaGGCGGCATGGCCAAGATGATGCGCGGCATCAGCGTGACGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGAGGCAACAGCCGCGAATTTc < 2:788216/150‑1 (MQ=255) cggcATGGCCAAGATGATGCGCGGCCTCGGTGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCACCAACTCTCCGTG‑AGCGGGGCAACAGCCGCGAATTTCgcggc > 2:1380083/1‑150 (MQ=255) cggcATGGCCAAGATGATGCGCGGCCTCGGTGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCgcggc > 2:1371734/1‑150 (MQ=255) cATGGCCAAGATGATGCGCGGCCTCGGTGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAAATTCgcggctgt < 1:504613/150‑4 (MQ=255) gCCAAGATGATGCGCGGCCTCGGTGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACa > 2:1914447/1‑126 (MQ=255) gCCAAGATGATGCGCGGCCTCGGTGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACa < 1:1914447/126‑1 (MQ=255) cAAGATGATGCGCGGCCTCGGTGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGc > 1:2441928/1‑150 (MQ=255) cAAGATGATGCGCGGCCTCGGTGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGc > 2:1361755/1‑150 (MQ=255) aaGATGATGCGCGGCCTCGGTGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCa > 1:2186038/1‑150 (MQ=255) gcgcGGCCTCGGTGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGa < 1:389166/150‑1 (MQ=255) gCCTCGGTGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCATGATCCGCGTGCCAGCCTTTTGTGGATCAGGCTCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCa > 1:2124191/1‑150 (MQ=255) cTCGGTGGGATGCCGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAgg < 2:722788/150‑1 (MQ=255) tCGGTGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGTGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGGTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAggg > 2:324139/1‑150 (MQ=255) tCGGTGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAggg > 1:238635/1‑150 (MQ=255) aTGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCt > 2:1933208/1‑150 (MQ=255) tgctgcCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAgg > 1:969314/1‑146 (MQ=255) tgctgcCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAgg < 2:969314/146‑1 (MQ=255) ctgcCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTcgcg < 2:1790253/111‑1 (MQ=255) ctgcCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTcgcg > 1:1790253/1‑111 (MQ=255) ctgcCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGc < 1:1622188/150‑1 (MQ=255) tgcCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGcc < 2:840129/150‑1 (MQ=255) tgcCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGcc < 1:2244327/150‑1 (MQ=255) tgcCAGGTGGCGGAATGCCAAAGCCGTAACCCCTGATCCGTGTGCCTGCCTTTTGTCGGGCAGGCCCCGC‑TAATGCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGcc < 1:1002106/150‑1 (MQ=255) ccAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGa > 1:853557/1‑150 (MQ=255) gTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGaaaaa < 2:2124191/150‑1 (MQ=255) gcATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCAtt > 2:2273071/1‑150 (MQ=255) cATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCAttt < 2:2186038/150‑1 (MQ=255) cATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCAttt > 2:1948607/1‑150 (MQ=255) cATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCAttt < 1:1803071/150‑1 (MQ=255) gCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCa < 2:2441928/150‑1 (MQ=255) ccAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCgg > 2:1937445/1‑103 (MQ=255) ccAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCgg < 1:1937445/103‑1 (MQ=255) cAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTa < 2:1951197/66‑1 (MQ=255) cAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTa > 1:1951197/1‑66 (MQ=255) aaaGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAAt > 2:2077680/1‑150 (MQ=255) tGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCg > 2:1760382/1‑150 (MQ=255) tGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCg > 1:1033597/1‑150 (MQ=255) gttgacgccTGACCCGGGTGCGTGACTTTTGAAGGGAAGGAGCCCA‑GAACCCAAGATGTAGCGGGGCCACAGCCGCAAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCg < 2:2344104/143‑1 (MQ=255) gTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCgt < 2:238635/150‑1 (MQ=255) tAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCgtg > 1:369413/1‑150 (MQ=255) aCCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTa > 1:2350053/1‑150 (MQ=255) ccccTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTAt > 2:2264648/1‑150 (MQ=255) ccccTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTAt > 2:2087493/1‑150 (MQ=255) cccTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCC‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGCCAGGGCGAGGCCTTGCCGAAAACGTCATTTGCAACTGTCCGTGTAtt > 2:727508/1‑150 (MQ=255) cccTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTAtt > 2:453696/1‑150 (MQ=255) ccTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGc < 1:1369075/113‑1 (MQ=255) ccTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGc > 2:1369075/1‑113 (MQ=255) ccTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTc > 2:338967/1‑150 (MQ=255) tCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCga < 1:2224883/150‑1 (MQ=255) ccGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCgag < 1:2077680/150‑1 (MQ=255) gggTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGaa > 1:1796454/1‑150 (MQ=255) gTGCCTGCCTTTCGTGGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTTGACGGCAGGGCGCGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAata < 2:1324063/150‑1 (MQ=255) cctgcctTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGGCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGc > 2:2203154/1‑150 (MQ=255) ctgcctTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCg > 1:2436533/1‑150 (MQ=255) tgcctTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCgg > 1:2059390/1‑150 (MQ=255) tgcctTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCgg > 1:1237705/1‑150 (MQ=255) cctTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCaaa < 2:1314305/120‑1 (MQ=255) cctTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCaaa > 1:1314305/1‑120 (MQ=255) ttttGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTc < 2:1280472/109‑1 (MQ=255) ttttGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTc > 1:1280472/1‑109 (MQ=255) tGTCGGGCAGGCGCCCA‑TAACCCCCGCTGGAGCGGGGCAACAGCCGCGAATGTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGCATTTTCggtcgctgt < 2:593031/150‑8 (MQ=255) gTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCCAAGCTTCGTGTATTCCCCGAGAATATGCGGCCTTTTgg < 1:1380083/150‑1 (MQ=255) gTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTgg < 1:1371734/150‑1 (MQ=255) gTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTgg < 1:2273071/150‑1 (MQ=255) tCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTgga > 1:593031/1‑149 (MQ=255) ggCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACAGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTGGGCAc > 2:1188224/1‑150 (MQ=255) gcgcCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTGGGCACCCgtg > 1:904218/1‑150 (MQ=255) cgcCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTGGGCACCCgtgt < 2:779420/150‑1 (MQ=255) cccA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATAGGCGGCCTTTTGGGCACCCGTGTGc > 1:1182711/1‑150 (MQ=255) cccggAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTGGGCACCCGTGTGc < 2:2293496/146‑1 (MQ=255) ccA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGc < 2:1147798/72‑1 (MQ=255) ccA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGc > 1:1147798/1‑72 (MQ=255) ccA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCg < 1:727086/107‑1 (MQ=255) ccA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCg > 2:727086/1‑107 (MQ=255) ccA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTGGGCACCCGTGTGcc > 2:2000510/1‑150 (MQ=255) a‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTGGGCACCCGTGTGCCTa > 2:2443851/1‑150 (MQ=255) tgttgccccGCTACAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTcc > 2:974889/6‑104 (MQ=255) tgttgccccGCTACAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTcc < 1:974889/99‑1 (MQ=255) ttgccccGCTACAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTGGGCACCCGTGTGCCTAtt > 2:1416064/4‑150 (MQ=255) aCCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTGGGCACCCGTGTGCCTAttt < 2:369413/150‑1 (MQ=255) aCCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTGGGCACCCGTGTGCCTAttt < 1:1948607/150‑1 (MQ=255) gccccGCTACAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTGGGCACCCGTGTGCCTATTTg > 1:2117679/2‑150 (MQ=255) cccGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCGTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGCGAATAGGCGGCCTTTTGGGCACCCGTGTGCCTATTTGGc < 1:189690/150‑1 (MQ=255) ccGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCAGCGAAAAAGCGTCCTGTTGGGCACCCGTGTGCCTATTTGGCa > 2:189690/1‑150 (MQ=255) cGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAAt > 1:1532292/1‑92 (MQ=255) cGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAAt < 2:1532292/92‑1 (MQ=255) gCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTGGGCACCCGTGTGCCTATTTGGCAtt < 1:2021307/150‑1 (MQ=255) tGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTGGGCACCCGTGTGCCTATTTGGCATTCa < 2:904218/150‑1 (MQ=255) | GATGAAGAAGTTTTCTGCCAAAGGCGGCATGGCCAAGATGATGCGCGGCCTCGGTGGGATGCTGCCAGGTGGCGGCATGCCAAAGCTGTAACCCCTGATCCGGGTGCCTGCCTTTTGTCGGGCAGGCGCCCA‑GAACCCCCGCTGTAGCGGGGCAACAGCCGCGAATTTCGCGGCGCAACCGGCAAATCTGGACGGCAGGGCGAGGCCTTGCCGAAAAAGTCATTTGCAAATGTCCGTGTATTCCCCGAGAATATGCGGCCTTTTGGGCACCCGTGTGCCTATTTGGCATTCA > NC_002947/1668327‑1668618 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |