Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,698,417 T→C 6.6% R41R (CGT→CGC cheBC → chemotaxis response regulator protein‑glutamate methylesterase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,698,4170TC 6.6% 308.8 / 7.6 106R41R (CGT→CGCcheBCchemotaxis response regulator protein‑glutamate methylesterase
Reads supporting (aligned to +/- strand):  ref base T (48/50);  new base C (4/3);  total (53/53)
Fisher's exact test for biased strand distribution p-value = 7.16e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.36e-01

Only 100 of 110 total aligned reads displayed.

GTGGAACTGATCGGAGTTGCTCAGGGATGAAGATCGCCATCGTCAATGACATGCCCCTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAGGCAACCCGGCGGATCATGGCCGAAACCCCGTGCGCCATTGTCATCGTCACGGTCGACCGTAAACAGAACGTCCACCGGG  >  NC_002947/1698269‑1698562
                                                                                                                                                    |                                                                                                                                                  
gtgGAACTGATCGGAGTTGCTCAGGGATGTAGATCGCCATCGTCAATGACATGCCCCTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGtt                                                                                                                                                   <  1:1819577/150‑1 (MQ=255)
gtgGAACTGATCGGAGTTGCTCAGGGATGAAGATCGCCATCGTCAATGACATGCCCCTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGtt                                                                                                                                                   <  1:1197270/150‑1 (MQ=255)
 tgGAACTGATCGGAGTTGCTCAGGGATGAAGATCGCCATCGTCAATGACATGCCCCTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTg                                                                                                                                                  >  2:2439381/1‑150 (MQ=255)
   gAACTGATCGGAGTTGCTCAGGGATGAAGATCGCCATCGTCAATGACATGCCCCTGGCCGTCGAAGCGGTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGGGCCGAGGCGGTGCAGCGTTGCa                                                                                                                                                >  2:277109/1‑150 (MQ=255)
       tGATCGGAGTTGCTCAGGGATGAAGCGGGNCATCGTCAATGACATGCCCNTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAANGCTGCACCgc                                                                                                                                            >  1:2275670/1‑149 (MQ=255)
       tGATCGGAGTTGCTCAGGGATGAAGATCGCCATCGTCAATGCCCTGCACCTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAACGCTGCACCgc                                                                                                                                            <  2:2275670/150‑2 (MQ=255)
       tGATCGGAGTTGCTCAGGGATGAAGATCGCCATCGTCAATGACATGCCCCTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAACGCTGCACCgc                                                                                                                                            <  1:1747665/150‑2 (MQ=255)
        gATCGGAGTTGCTCAGGGATGAAGATCGCCATCGTCAATGACATGCCCCTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAg                                                                                                                                           <  1:105708/150‑1 (MQ=255)
         aTCGGAGTTGCTCAGGGATGAAGATCGCCATCGTCAATGACATGCCCCTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGc                                                                                                                                          >  2:599152/1‑150 (MQ=255)
         aTCGGAGTTGCTCAGGGATGAAGATCGCCATCGTCAATGACATGCCCCTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGc                                                                                                                                          >  2:1393211/1‑150 (MQ=255)
            ggAGTTGCTCAGGGATGAAGATCGCCATCGTCAATGACATGCCCCTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGt                                                                                                                                       >  1:2109676/1‑150 (MQ=255)
             gAGTTGCTCAGGGATGAAGATCGCCATCGTCAATGACATGCCCCTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGtt                                                                                                                                      >  2:1403349/1‑150 (MQ=255)
               gTTGCTCAGGGATGAAGATCGCCATCGTCAATGACATGCCCCTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTAc                                                                                                                                    <  1:2320382/150‑1 (MQ=255)
               gTTGCTCAGGGATGAAGATCGCCATCGTCAATGACATGCCCCTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTAc                                                                                                                                    <  1:1256527/150‑1 (MQ=255)
                    tCAGGGATGAAGATCGCCATCGTCAATGACATGCCCCTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGAc                                                                                                                              <  1:249997/150‑1 (MQ=255)
                    tCAGGGATGAAGATCGCCATCGTCAATGACATGCCCCTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGAc                                                                                                                              >  1:48792/1‑150 (MQ=255)
                    tCAGGGATGAAGATCGCCATCGTCAATGACATGCCCCTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGAc                                                                                                                              >  1:601800/1‑150 (MQ=255)
                    tCAGGGATGAAGATCGCCATCGTCAATGACATGCCCCTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGCCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTAGCGGAc                                                                                                                              >  1:649714/1‑150 (MQ=255)
                      aGGGATGAAGATCGCCATCGTCAATGACATGCCCCTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCt                                                                                                                            <  1:99137/150‑1 (MQ=255)
                      aGGGATGAAGATCGCCATCGTCAATGACATGCCCCTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCCACGCCACGGTGCACCGAGCAGTTACCGGACCt                                                                                                                            >  1:1819477/1‑150 (MQ=255)
                         gATGAAGATCGCCATCGTCAATGACATGCCCCTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGAt                                                                                                                         <  2:1903903/150‑1 (MQ=255)
                          aTGAAAATCGCCATCGTCAATGACATGCCCCTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGagc                                                                                                                        <  2:1009168/150‑3 (MQ=255)
                               gATCGCCATCGTCAATGACATGCCCCTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCAt                                                                                                                   <  2:2449009/150‑1 (MQ=255)
                               gATCGCCATCGTCAATGACATGCCCCTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCAt                                                                                                                   <  1:736425/150‑1 (MQ=255)
                                    ccATCGTCAATGACATGCCCCCGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGAACGCACACCAGGTCGTGTGGGGGGCCAGCAACGGTGCCGATGCGGTGCAGCGTTGCACTGAGTAGTTACCGGACCTGATCCTCATGGAcc                                                                                                              <  1:716665/150‑1 (MQ=255)
                                       tCGTCAATGACATGCCCCTGGCCGTCGAAGCGTTGCGCCTGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCATCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGa                                                                                                           <  2:2190056/150‑1 (MQ=255)
                                       tCGTCAATGACATGCCCCTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGa                                                                                                           <  1:2439381/150‑1 (MQ=255)
                                       tCGTCAATGACATGCCCCTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGa                                                                                                           <  2:30899/150‑1 (MQ=255)
                                         gTCAATGACATGCCCCTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATc                                                                                                         >  1:1952659/1‑150 (MQ=255)
                                             aTGACATGCCCCTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGc                                                                                                     >  1:527141/1‑150 (MQ=255)
                                             aTGACATGCCCCTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAACGCTGCACCgc                                                                                                                                            >  2:2212173/1‑111 (MQ=255)
                                                aCATGCCCCTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAg                                                                                                                                        <  2:718806/113‑1 (MQ=255)
                                                aCATGCCCCTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCAt                                                                                                                   <  1:1600870/133‑1 (MQ=255)
                                                aCATGCCCCTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCAt                                                                                                                   >  2:1600870/1‑133 (MQ=255)
                                                 cATGCCCCTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGt                                                                                                 >  2:2134850/1‑150 (MQ=255)
                                                    gCCCCTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGAt                                                                                              <  2:2207733/150‑1 (MQ=255)
                                                     ccccTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATg                                                                                             <  2:673492/150‑1 (MQ=255)
                                                      cccTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTCCCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATgg                                                                                            >  1:2161381/1‑150 (MQ=255)
                                                       ccTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATg                                                                                                                  <  2:1810773/127‑1 (MQ=255)
                                                       ccTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATg                                                                                                                  >  1:1810773/1‑127 (MQ=255)
                                                       ccTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGa                                                                                           >  2:1540389/1‑150 (MQ=255)
                                                        cTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGAc                                                                                          <  1:1403349/150‑1 (MQ=255)
                                                        cTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGAc                                                                                          >  1:1806776/1‑150 (MQ=255)
                                                         tGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACg                                                                                         >  2:2307203/1‑150 (MQ=255)
                                                           gCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTg                                                                                                            >  1:1019399/1‑129 (MQ=255)
                                                           gCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTg                                                                                                            <  2:1019399/129‑1 (MQ=255)
                                                              gTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTc                                                                                    <  1:599152/150‑1 (MQ=255)
                                                              gTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGGGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTc                                                                                    <  2:102377/150‑1 (MQ=255)
                                                               tCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCg                                                                                   >  1:1427765/1‑150 (MQ=255)
                                                                 gAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAg                                                                                 <  2:675677/150‑1 (MQ=255)
                                                                 gAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAg                                                                                 <  2:601800/150‑1 (MQ=255)
                                                                 gAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAg                                                                                 <  1:2173708/150‑1 (MQ=255)
                                                                 gAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAg                                                                                 <  2:1112488/150‑1 (MQ=255)
                                                                 gAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAg                                                                                 <  1:1093320/150‑1 (MQ=255)
                                                                  aaGCGTTGCGCCGGGCGGTCGCCCGGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGCTCATGCCGGTGATGGACGGTGTCGAgg                                                                                <  1:939850/150‑1 (MQ=255)
                                                                       ttGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAGGCAAcc                                                                           >  1:1039020/1‑150 (MQ=255)
                                                                          cgcCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAGGCAACCcgg                                                                        <  2:1039020/150‑1 (MQ=255)
                                                                           gcCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGtt                                                                                                                                                   <  1:2370617/75‑1 (MQ=255)
                                                                           gcCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGtt                                                                                                                                                   >  2:2370617/1‑75 (MQ=255)
                                                                           gcCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAGGCAACCcggc                                                                       >  1:88270/1‑150 (MQ=255)
                                                                           gcCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAGGCAACCcggc                                                                       >  2:1364045/1‑150 (MQ=255)
                                                                           gcCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAGGCAACCcggc                                                                       >  2:2003946/1‑150 (MQ=255)
                                                                                  ggTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATgg                                                                                                                 >  1:1680692/1‑101 (MQ=255)
                                                                                    tCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGAc                                                                                                                              <  2:565143/86‑1 (MQ=255)
                                                                                    tCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAGGCAACCcggc                                                                       >  2:391009/1‑141 (MQ=255)
                                                                                    tCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAGGCAACCcggc                                                                       <  1:391009/141‑1 (MQ=255)
                                                                                    tCGCCCTGGAGCCCGCACACCAGGTCGGGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGAc                                                                                                                              >  1:565143/1‑86 (MQ=255)
                                                                                     cGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCAAGCAGCGACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAGGCAACCCGGCGGATCATGGc                                                             <  1:290480/150‑1 (MQ=255)
                                                                                              gCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAGGCAACCCGGCGGATCATGGCCGAAAcccc                                                    >  2:2419538/1‑150 (MQ=255)
                                                                                              gCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGGGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAGGCAACCCGGCGGATCATGGCCGAAAcccc                                                    <  1:277109/150‑1 (MQ=255)
                                                                                                ccGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAGGCAACCCGGCGGATCATGGCCGAAACCCCGt                                                  >  1:1855172/1‑150 (MQ=255)
                                                                                                 cGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGgt                                                                                       <  1:231769/112‑1 (MQ=255)
                                                                                                 cGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGgt                                                                                       >  2:231769/1‑112 (MQ=255)
                                                                                                 cGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTCCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGgt                                                                                       >  2:1957484/1‑112 (MQ=255)
                                                                                                 cGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTCCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGgt                                                                                       <  1:1957484/112‑1 (MQ=255)
                                                                                                   cacaCCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATg                                                                                             >  2:1965634/1‑104 (MQ=255)
                                                                                                   cacaCCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATg                                                                                             <  1:1965634/104‑1 (MQ=255)
                                                                                                    acacCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAGGCAACCCGGCGGATCATGGCCGAAACCCCGTgcgc                                              >  1:943942/1‑150 (MQ=255)
                                                                                                              gtgtGGGTGGCCAGCAACGGTGCCGCGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAGGCAACCCGGCGGATCATGGCCGAAACCCCGTGCGCCATTGTCATc                                    <  1:2210515/150‑1 (MQ=255)
                                                                                                              gtgtGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCgg                                                                                                  <  1:124041/88‑1 (MQ=255)
                                                                                                              gtgtGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCgg                                                                                                  >  2:124041/1‑88 (MQ=255)
                                                                                                              gtgtGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAGGCAACCCGGCGGATCATGGCCGAAACCCCGTGCGCCATTGTCATc                                    <  1:2307203/150‑1 (MQ=255)
                                                                                                              gtgtGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAGGCAACCCGGCGGATCATGGCCGAAACCCCGTGCGCCATTGTCATc                                    <  2:2013723/150‑1 (MQ=255)
                                                                                                                  gggtggCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAGGCAACCCGGCGGATCATGGCCGAAACCCCGTGCGCCATTGTCGTCGTCa                                >  1:320326/1‑150 (MQ=255)
                                                                                                                   ggtggCCAGCAACGGTGCCGAGGCGGTGCAGAGTAGAAACAAGCAGTACCCGCATTGTGATTTCATGGACCTGGGCATGGCGGTGATGGACGGTGTCGAGGCAACCCGGCGGATCATGGCCGAAACCCCGTGCGCCATTGTCATCGTCAc                               >  1:2125851/1‑150 (MQ=255)
                                                                                                                    gtggCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAGGCAACCCGGCGGATCATGGCCGAAACCCCGTGCGCCATTGTCATCGTCACg                              >  2:1837397/1‑150 (MQ=255)
                                                                                                                     tggCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAGGCAACCCGGCGGATCATGGCCGAAACCCCGTGCGCCATTGTCATCGTCACgg                             >  2:1934256/1‑150 (MQ=255)
                                                                                                                                     cGAGGCGGTGCAGCGTTGCTCCGCGCAGTTACCGGACCTGATCCTCATGGATCTGATCATGCCGGTGATGGACGGTGTCGAGGCAACCCGGCGGATCATGGCCGAAACCCCGTGCGCCATTGTCATCGTCACGGTCGACCGTAAACAGaa             <  2:1098756/150‑1 (MQ=255)
                                                                                                                                      gAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAGGCAACCCGGCGGATCATGGCCGAAACCCCGTGCGCCATTGTCATCGTCACGGTCGACCGTAAACAGAAc            >  1:296459/1‑150 (MQ=255)
                                                                                                                                      gAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATCACGGTGATGGAAGTTGCTTAGGCGACCCGGCGGATCATGGCCGAAACCCCGTGCGCCATTGTCATCGTCACGGTCGACCGTAAACAGAAc            >  1:884965/1‑150 (MQ=255)
                                                                                                                                       gctcGGTGCAGCGTTGCACCGGGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGGCGGTGTCGAGGCAACCCGGCGGATCATGGCCGAAACCCCGTGCGCCATTGTCATCGTCACGGTCGACCGTAAACAGAACg           >  1:657363/4‑150 (MQ=255)
                                                                                                                                         tcGGTGCAACGCTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAGGCAACCCGGCGGATCATGGCCGAAACCCCGTGCGCCATTGTCATCGTCACGGTCGACCGTAAACAGAACGTc         >  2:1763826/2‑150 (MQ=255)
                                                                                                                                         tcGGTGCAACGCTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAGGCAACCCGGCGGATCATGGCCGAAACCCCGTGCGCCATTGTCATCGTCACGGTCGACCATAAACAGAACGTc         >  2:1996546/2‑150 (MQ=255)
                                                                                                                                         gCGGTGCAGCGTTGCACAGCGCACTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAGGCAACCCGGCGGATCATGGCCGAAACCCCGTGCGCCATTGTCATCGTCACGGTCGACCGTAAACAGAACGTc         <  1:154091/150‑1 (MQ=255)
                                                                                                                                            gTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAGGCAACCCGGCGGATCATGGCCGAAACCCCGTGCGCCATTGTCATCGTCACGGTCGACCGTAAACAGAACGTCCAc      >  2:1231327/1‑150 (MQ=255)
                                                                                                                                               cAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAGGCAACCCGGCGGATCATGGCCGAAACCCCGTGCGCCATTGTCATCGTCACGGTCGACCGTAAACCGAACGTCCACCgg   <  1:2133589/150‑1 (MQ=255)
                                                                                                                                               cAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAGGCAACCCGGCGGATCATGGCCGAAACCCCGTGCGCCATTGTCATCGTCACGGTCGACCGTAAACAGAACGTCCACCgg   <  1:1364045/150‑1 (MQ=255)
                                                                                                                                               cAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAGGCAACCCGGCGGATCATGGCCGAAACCCCGTGCGCCATTGTCATCGTCACGGTCGACCGTAAACAGAACGTCCACCgg   <  1:2003946/150‑1 (MQ=255)
                                                                                                                                                aGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAGGCAACCCGGCGGATCATGGc                                                             <  1:2067143/91‑1 (MQ=255)
                                                                                                                                                aGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAGGCAACCCGGCGGATCATGGCCGAAACCCCGTGCGCCATTGTCATCGTCACGGTCGACCGTAAACAGAACGTCCACCggg  >  2:1289683/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
GTGGAACTGATCGGAGTTGCTCAGGGATGAAGATCGCCATCGTCAATGACATGCCCCTGGCCGTCGAAGCGTTGCGCCGGGCGGTCGCCCTGGAGCCCGCACACCAGGTCGTGTGGGTGGCCAGCAACGGTGCCGAGGCGGTGCAGCGTTGCACCGAGCAGTTACCGGACCTGATCCTCATGGACCTGATCATGCCGGTGATGGACGGTGTCGAGGCAACCCGGCGGATCATGGCCGAAACCCCGTGCGCCATTGTCATCGTCACGGTCGACCGTAAACAGAACGTCCACCGGG  >  NC_002947/1698269‑1698562

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: