| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,998,717 | T→A | 10.8% | D269V (GAC→GTC) | rffG ← | dTDP‑glucose 4,6‑dehydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,998,717 | 0 | T | A | 10.8% | 212.5 / 15.5 | 74 | D269V (GAC→GTC) | rffG | dTDP‑glucose 4,6‑dehydratase |
| Reads supporting (aligned to +/- strand): ref base T (32/34); new base A (4/4); total (36/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.88e-01 | |||||||||||
GCTCCCGCTCGATCTTGCGTGCATCGATGGCATAACGGCGGTCATGGCCTGGGCGGTCGGTTACGTAGGCGATGAGTTCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGAACGCACCGGCTTCCAGTACGCGACGGATGCCCGAGCAGTGATCTTCGACATACAGCCAGTCGCGGATTTGC > NC_002947/1998568‑1998866 | gCTCCCGCTCGTTCTTGCGTGCATCGATGGCATAACGGCGGTCATGGCCTGGGCGGTCGGTTATGTCTTCTATGAGTTCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCtcgt < 1:746595/150‑1 (MQ=255) cccGCTCGATCTTGCGTGCATCGATGGCATAACGGCGGTCATGGCCTGGGCGGTCGGTTACGTAGGCGATGAGTTCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCga < 1:837273/150‑1 (MQ=255) ccGCTCGATCTTGCGTGCATCGATGGCATAACGGCGGTCATGGCCTGGGCGGTCGGTTACGTAGGCGATGAGTTCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCgag > 1:1781016/1‑150 (MQ=255) gCTCGATCTTGCGTGCATCGATGGCATAACGGCGGTCATGGCCTGGGCGGTCGGTTACGTAGGCGATGAGTTCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGaa > 2:306306/1‑150 (MQ=255) gCTCGATCTTGCGTGCATCGATGGCATAACGGCGGTCATGGCCTGGGCGGTCGGTTACGTAGGCGATGAGTTCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGaa < 2:1255166/150‑1 (MQ=255) tCGATCTTGCGTGCATCGATGGCATAACGGCGGTCATGGCCTGGGCGGTCGGTTACGTACGCGATGAGTTCTGCATACGGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCCTATGGTAGGGAAgg < 2:819870/150‑1 (MQ=255) aTCTTGCGTGCATCGATGGCATAACGGCGGTCATGGCCTGGGCGGTCGGTTACGTAGGCGATGAGTTCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCTTCTCGACGAGATGGcac < 1:2102628/150‑3 (MQ=255) tCTTGCGTGCATCGATGGCATAACGGCGGTCATGGCCTGGGCGGTCGGTTACGTAGGCGATGAGTTCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGc > 1:1570479/1‑150 (MQ=255) gTGCATCGATGGCATAGCGGCGGTCATGGCCTGGGCGGTCGGTTACGTAGGCTATGAGTTCTGCATACTGTTCGACAGGCTCGCCCGTCTTCTGTTTTATTACCTGGCGCTATACGGCGGGTGCCATCTCGTGGAGCAGGCCGCagagcg > 1:1991120/1‑148 (MQ=255) gTGCATCGATGGCATAACTGCGGTTTTGGCGTGGGCGGTCGGTTACGTAGGCGATGAGTTCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGNgtg < 2:1496264/150‑1 (MQ=255) gCATCGATGGCATAACGGCGGTCATGGCCTGGGCGGTCGGTTACGTAGGCGATGAGTTCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCgag > 1:1747963/1‑134 (MQ=255) gCATCGATGGCATAACGGCGGTCATGGCCTGGGCGGTCGGTTACGTAGGCGATGAGTTCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCgag < 2:1747963/134‑1 (MQ=255) ggCATAACGGCGGTCATGGCCTGGGCGGTCGGTTACGTAGGCGATGAGTTCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCAca‑at < 2:1488019/150‑1 (MQ=255) aaCGGCGGTCATGGCCTGGGCGGTCGGTTACGTAGGCGATGAGTTCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGc > 1:1113805/1‑129 (MQ=255) aaCGGCGGTCATGGCCTGGGCGGTCGGTTACGTAGGCGATGAGTTCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGc < 2:1113805/129‑1 (MQ=255) aCGGCGGTCATGGCCTGGGCGGTCGGTTACGTAGGCGATGAGTTCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCAca‑atgtcaat < 2:1781016/150‑1 (MQ=255) cggTCATGGCCTGGGCGGTCGGTTACGTAGGTAATGATACGGGGATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTg < 2:2018408/150‑1 (MQ=255) cggTCATGGCCTGGGCGGTCGGTTACGTAGGCGATGAGTTCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTg < 2:1570479/150‑1 (MQ=255) cggTCATGGCCTGGGCGGTCGGTTACGTAGGCGATGAGTTCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTg < 1:1290405/150‑1 (MQ=255) cggGCATGGCCTGGGCGGTCGGTTACGTAGGCGATGAGTTCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTTGCGCGATCACTCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTg < 1:428055/150‑1 (MQ=255) ggTCATGGCCTGGGCGGTCGGTTACGTAGGCGATGAGTTCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTgg > 2:1849361/1‑150 (MQ=255) ggTCATGGCCTGGGCGGTCGGTTACGTAGGCGATGAGTTCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTgg > 2:1850409/1‑150 (MQ=255) gTCCTGGCCTGGGCGGTCGGTTACGTAGGCGATGAGTTCTGAAAACTATACGTAAAACATTTGATGCTTCTTTTTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGc < 1:877501/150‑1 (MQ=255) gTCATGGCCTGGGCGGTCGGTTACGTAGGCGATGAGTTCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGc < 2:1193387/150‑1 (MQ=255) tCATGGCCTGGGCGGTCGGTTACGTAGGCGATGAGTTCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGCTTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCt > 2:192192/1‑150 (MQ=255) ccTGGGCGGTCGGTTACGTAGGCGATGAGTTCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCAca‑atgt > 2:440704/1‑133 (MQ=255) ccTGGGCGGTCGGTTACGTAGGCGATGAGTTCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCAca‑atgt < 1:440704/133‑1 (MQ=255) ccTGGGCGGTCGGTTACGTAGGCGATGAGTTCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCa < 1:1849361/150‑1 (MQ=255) ccTGGGCGGTCGGTTACGTAGGCGATGAGTTCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCa < 1:1850409/150‑1 (MQ=255) tGGGCGGTCGGTTACGTAGGCGATGAGTTCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCAtt < 1:1782792/150‑1 (MQ=255) gggCGGTCGGTTACGTAGGCGATGAGTTCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTGGGCTTTTTCATTc > 1:949973/1‑150 (MQ=255) gCGGTCGGTTACGTAGGCGATGAGTTCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCa < 1:306306/150‑1 (MQ=255) aTGAGTTCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTg > 1:1644294/1‑90 (MQ=255) aTGAGTTCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTg < 2:1644294/90‑1 (MQ=255) aTGAGTTCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGtc > 2:311751/1‑150 (MQ=255) aTGAGTTCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGtc < 2:266418/150‑1 (MQ=255) ttCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGcc > 2:1471467/1‑150 (MQ=255) ttCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGcc > 1:2391831/1‑150 (MQ=255) ttCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGcc > 1:199592/1‑150 (MQ=255) gCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCga < 1:2268594/73‑1 (MQ=255) gCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCga > 2:2268594/1‑73 (MQ=255) gCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGAAc > 1:812992/1‑150 (MQ=255) cGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGAACGCACCGGCtt > 2:2208743/1‑150 (MQ=255) gACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGAACGCACCGGCTTc < 1:1471467/150‑1 (MQ=255) gACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCGGCAGAGTGTACGCACA‑ATGTCCGTGGTGGCTTTTTCATTCCAGCCGCCAAGGTTGTACGTCTCGCCGAACGCACCGGCTTc > 1:25837/1‑150 (MQ=255) aGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCTTCTCGACGAGATGGca > 1:1461715/1‑65 (MQ=38) aGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCTTCTCGACGAGATGGca > 1:1461746/1‑65 (MQ=38) aGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCTTCTCGACGAGATGGca < 2:1461746/66‑2 (MQ=38) aGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCTTCTCGACGAGATGGca < 2:1461715/66‑2 (MQ=38) gCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCAAAGCTGT‑TATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGAACGCACCGGCTTCCAGTa > 1:1332984/1‑150 (MQ=255) tCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGAACGCACCGGCTTCCAGTAcg > 1:1869308/1‑150 (MQ=255) ccGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGAACGCACCGGCTTCCAGTACGCGa < 1:465105/150‑1 (MQ=255) ttctGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGAACGCACCGGCTTCCAGTACGCGACGGATg < 2:1291875/150‑1 (MQ=255) tctGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGAACGCACCGGCTTCCAGTACGCGACGGATGc > 1:179725/1‑150 (MQ=255) tgattgatTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGAACGCACCGGCTTCCAGTACGCGACGGATGccc > 1:977763/1‑150 (MQ=255) tgattgatTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGAACGCACCGGCTTCCAGTACGCGACGGATGccc < 1:1568611/150‑1 (MQ=255) tgattgatTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGAACGCACCGGCTTCCAGTACGCGACGGATGccc < 1:1091735/150‑1 (MQ=255) attgattACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGAACGCACCGGCTTc < 1:1855178/129‑1 (MQ=255) attgattACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGAACGCACCGGCTTc > 2:1855178/1‑129 (MQ=255) attgattACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGAACGCACCGGCTTCCAGTACGCGACGGATGCCCGa < 2:199592/150‑1 (MQ=255) ttgattACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGAAc < 1:943268/117‑1 (MQ=255) ttgattACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGAAc > 2:943268/1‑117 (MQ=255) ttACCTGGCGCGATACCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGAACGCACCGGCTTCCAGTACGCGACGGATGCCCGAGCAGt < 2:1991120/150‑1 (MQ=255) cTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGAACGCACCGGCTTCCAGTACGCGACGGATGCCCGAGCAGTGATc > 1:1399179/1‑150 (MQ=255) gcgcGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGAACGCACCGGCTTCCAGTACGCGACGGATGCCCGAGCAGTGATCTTc < 2:179725/150‑1 (MQ=255) gATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGAACGCACCGGCTTCCAGTACGCGACGGATGCCCGAGCAGTGATCTTCGACa < 2:812992/150‑1 (MQ=255) agccttctcGACGAGATGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGAACGCACCGGCTTCCAGTACGCGACGGATGCCCGAGCAGTGATCTTCGACATACAGCCAGTc > 1:2214324/6‑150 (MQ=255) gCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGAACGCACCGGCTTCCAGTACGCGACGGATGCCCGAGCAGTGATCTTCGACATACAGCCAGTcg > 1:461689/1‑150 (MQ=255) ccttctcGACGAGATGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGAACGCACCGGCTTCCAGTACGCGACGGATGCCCGAGCa > 1:1422736/4‑124 (MQ=255) ccttctcGACGAGATGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGAACGCACCGGCTTCCAGTACGCGACGGATGCCCGAGCa < 2:1422736/121‑1 (MQ=255) ccATCTCGTCTAAAATGCTGCAGATTGTACTCACA‑ATTTCAATGCTAACTTTTTCATTCCAGCCGCCAATATTATACGTCTCCACGAACGCAACTATTTCCATTCCGGGACGATTGCCGGTAATGTCATCTTCTACATTCAGCCATTcgc < 2:1110458/150‑1 (MQ=255) cATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGCACGCACCGGCTTCCAGTACGCGACGGATGCCCGAGCAGTGATCTTCGACATACAGCCAGTcgcg > 2:70465/1‑150 (MQ=255) aTCTCGTCGATAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGAACGCACCGGCTTCCAGTACGCGACGGATGCCCGAGCAGTGATCTTCGACATACAGCCAGTCGCgg > 2:1912503/1‑150 (MQ=255) tctcGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGAACGCACCGGCTTCCAGTACGCGACGGATGCCCGAGCAGTGATCTTCGACATACAGCCAGTCGCGGa > 1:545333/1‑150 (MQ=255) tctcGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGAACGCACCGGCTTCCAGTACGCCACGGATGCCCAAACCGTGATCGTCGACATACAGCCAGCcgcgtt > 2:514719/1‑148 (MQ=255) aatcgtcgAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGAACGCACCGGCTTCCa > 2:1827524/3‑99 (MQ=255) aatcgtcgAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGAACGCACCGGCTTCCa < 1:1827524/97‑1 (MQ=255) gtcgAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGAACGCACCGGCTTCCAGTACGCGACGGATGCCCGAGCAGTGATCTTCGACATACAGCCAGTCGCGGATTTg > 2:1563509/1‑150 (MQ=255) tcgAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGAACGCACCGGCTTCCAGTACGCGACGGATGCCCGAGCAGTGATCTTCGACATACAGCCAGTCGCGGATTTGc > 1:18655/1‑150 (MQ=255) tcgAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGAACGCACCGGCTTCCAGTACGCGACGGATGCCCGAGCAGTGATCTTCGACATACAGCCAGTCGCGGATTTGc < 2:949973/150‑1 (MQ=255) | GCTCCCGCTCGATCTTGCGTGCATCGATGGCATAACGGCGGTCATGGCCTGGGCGGTCGGTTACGTAGGCGATGAGTTCTGCATACTGTTCGACAGGCTCGCCGGTCTTCTGATTGATTACCTGGCGCGATGCCGCAGGTGCCATCTCGTCGAGAAGGCTGCAGAGTGTACGCACA‑ATGTCAATGTTGGCTTTTTCATTCCAGCCGCCAATATTGTACGTCTCGCCGAACGCACCGGCTTCCAGTACGCGACGGATGCCCGAGCAGTGATCTTCGACATACAGCCAGTCGCGGATTTGC > NC_002947/1998568‑1998866 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |