| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,117,220 | C→T | 5.8% | P285S (CCA→TCA) | PP_1884 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,117,220 | 0 | C | T | 5.8% | 199.2 / 2.4 | 69 | P285S (CCA→TCA) | PP_1884 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (30/34); new base T (2/2); total (33/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.97e-01 | |||||||||||
GGCTGGTCGCCATGGGGCCCAGTAACGGGCCGCAGAATATGCCTGGCCCGGAATACCGTTACTTGATTCCCGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGTGATCTGACAGCGACTGCCATTGCAGGTGTGATCGCCGCAGAGAAAGAAAGTTTTGTTAGTCCTTACTATGAGTCTTACTGGCGCGGTAGTGTTGAT > NC_002947/2117071‑2117369 | ggCTGGTCGCCATGGGGCCCAGTAACGGGCCGCAGAATATGCCTGGCCCGGAATACCGTTACTTGATTCCCGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGc > 1:2068694/1‑150 (MQ=255) gTCGCCATGGGGCGCAGTAACGGGCCGCAGAATATGCCTGGCCCGGAATACCGTTACTTGATTCCCGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTg > 2:2040898/1‑150 (MQ=255) ccccATGGCGACCAGTAACGGGCCGCAGAATATGCCTGGCCCGGAATACCGTTACTTGATTCCCGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGa < 1:809/148‑1 (MQ=255) gCCATGGGGCCCAGTAACGGGCCGCAGAATATGCCTGGCCCGGAATACCGTTACTTGATTCCCGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAg > 2:2006266/1‑150 (MQ=255) cATGGGGCCCAGTAACGGGCCGCAGAATATGCCTGGCCCGGAATACCGTTACTTGATTCCCGATGACAACGGTGATTACTCGGCGACGGTACTGCTAGATAAGGCCTGGGGGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGtt > 2:1302764/1‑150 (MQ=255) gggCCCAGTAACGGGCCGCAGAATATGCCTGGCCCGGAATACCGTTACTTGATTCCCGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTc < 1:1716529/150‑1 (MQ=255) gCCCAGTAACGGGCCGCAGAATATGCCTGGCCCGGAATACCGTTACTTGATTCCCGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTc > 1:1813941/1‑148 (MQ=255) gCCCAGTAACGGGCCGCAGAATATGCCTGGCCCGGAATACCGTTACTTGATTCCCGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTc < 2:1813941/148‑1 (MQ=255) cccAGTAACGGGCCGCAGAATATGCCTGGCCCGGAATACCGTTACTTGATTCCCGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACg > 2:1085917/1‑150 (MQ=255) ccAGTAACGGGCCGCAGAATATGCCTGGCCCGGAATACCGTTACTTGATTCCCGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGa > 1:1683932/1‑150 (MQ=255) aGTAACGGGCCGCAGAATATGCCTGGCCCGGAATACCGTTACTTGATTCCCGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGGGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAAt < 1:1302764/150‑1 (MQ=255) ggCCGCAGAATATGCCTGGCCCGGAATACCGTTACTTGATTCCCGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGttgaat < 1:515198/150‑1 (MQ=255) ccGCAGAATATGCCTGGCCCGGAATACCGTTACTTGATTCCCGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGttgaattt < 2:906930/150‑1 (MQ=255) cAGAATATGCCTGGCCCGGAATACCGTTACTTGATTCCCGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGTCATTGGAGTTTTTCACGAATGttgaatttgaa > 2:2316492/1‑150 (MQ=255) cAGAATATGCCTGGCCCGGAATACCGTTACTTGATTCCCGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGTCATTGGAGTTTTTCACGAATGttgaatttgaa > 2:2318417/1‑150 (MQ=255) aaTATGCCTGGCCCGGAATACCGTTACTTGATTCCCGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTgaatttgaattt < 2:1683932/150‑1 (MQ=255) aaTATGCCTGGCCCGGAATACCGTTACTTGATTCCCGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTgaatttgaattt < 2:2290158/150‑1 (MQ=255) ccTGGCCCGGAATACCGTTACTTGATTCCCGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGt > 2:1389383/1‑150 (MQ=255) tGGCCCGGAATACCGTTACTTGATTCCCGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGc < 2:1559662/150‑1 (MQ=255) tGGCCCGGAATACCGTTACTTGATTCCCGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGc > 1:100945/1‑150 (MQ=255) gCCCGGAATACCGTTACTTGATTCCCGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAg < 1:1313003/150‑1 (MQ=255) cccGGAATACCGTTACTTGATTCCCGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGa > 2:1589970/1‑150 (MQ=255) gAATACCGTTACTTGATTCCCGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAAc < 1:2322037/150‑1 (MQ=255) aaTACCGTTACTTGATTCCCGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGTCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACg < 1:2316492/150‑1 (MQ=255) aaTACCGTTACTTGATTCCCGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGTCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACg < 1:2318417/150‑1 (MQ=255) aaTACCGTTACTTGATTCCCGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACg < 1:1039262/150‑1 (MQ=255) aTACCGTTACTTGATTCCCGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACgg < 1:2040898/150‑1 (MQ=255) aTACCGTTACTTGATTCCCGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACgg < 1:1085917/150‑1 (MQ=255) tACCATTACTTGATTCCCGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGt > 2:1138148/1‑150 (MQ=255) caCCGTTACTTGATTCCCGATGACCACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTGGAATTTGAATTTGAACGTGCAGAAAACGGt < 1:908863/149‑1 (MQ=255) gTTACTTGATTCCCGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGTGATc < 2:100945/150‑1 (MQ=255) gATTCCCGATGACAACGGTGATTACTCGGCGACGGTACTGCTCGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTCGAATTTGAACGTGCAGAAAACGGTGATCTGACAGc > 2:1593950/1‑150 (MQ=255) ttCCCGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGTGATCTGACAGCGa > 2:1931135/1‑150 (MQ=255) ccGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGtt < 1:382614/104‑1 (MQ=255) ccGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGtt > 2:382614/1‑104 (MQ=255) cGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGTGATCTGACAGCGACTGc > 1:1955902/1‑150 (MQ=255) aCGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGTGTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGTGATCTGACAGCGACTGCCATTGCAg < 1:145001/150‑1 (MQ=255) aCGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGTGATCTGACAGCGACTGCCATTGCAg < 1:1931135/150‑1 (MQ=255) tGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGt < 1:1604046/121‑1 (MQ=255) tGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGt > 2:1604046/1‑121 (MQ=255) gATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGTGATCTGACAGCGACTGCCATTGCAGGtgtg > 2:1384929/1‑150 (MQ=255) aTTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGTGATCTGACAGCGACt > 1:107473/1‑134 (MQ=255) aTTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGTGATCTGACAGCGACt < 2:107473/134‑1 (MQ=255) tCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGTGATCTGACAGCGACTGCCATTGCAGGTGTGATcgcc > 1:615450/1‑150 (MQ=255) gCGACGTTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGTGATCTGACAGCGACTGCCATTGCAGGTGTGATCGCCGCa < 1:1384929/150‑1 (MQ=255) cGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGTGATCTGACAGCGACTGCCATTGCAGGTGTGATCGCCGCAgaga < 2:1059642/150‑1 (MQ=255) cTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGTGATCTGACAGCGACTGCCATTGCAGGTGTGATCGCCGCAGAGAAAGAAAGt > 1:1915712/1‑150 (MQ=255) cTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGTGATCTGACAGCGACTGCCATTGCAGGTGTGATCGCCGCAGAGAAAGAAAGt > 2:9664/1‑150 (MQ=255) ttGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTAACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGTGATCTGACAGCGACTGCCATTACAGGTGTGATCGCCGCAGAGAAAGAAAGtt > 1:370185/1‑150 (MQ=255) tAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGGGCAGAAAACGGTGATCTGACAGCGACTGCCATTGCAGGTGTGATCGCCGCAGAGAAAGAAAGTTTTGt > 1:1334771/1‑150 (MQ=255) aaGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGTGATCTGACAGCGACTGCCATTGCAGGTGTGATCGCCGCAGAGAAAGAAAGTTTTGtt < 1:2186308/150‑1 (MQ=255) cTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGTGATCTGACAGCGACTGCCATTGCAGGTGTGATCGCCGCAGAGAAAGAAAGTTTTGTTAGTcc < 2:615450/150‑1 (MQ=255) gTGGCGTTGGCTACCGTGTTAAGCAAACTGACACTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGTGATCTGACAGCGACTGCCATTGCAGGTGTGATCGCCGCAGAGAAAGAAAGTTTTGTTAGTCCTTAc > 1:311696/1‑150 (MQ=255) ggCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGTGATCTGACAGCGACTGCCATTGCAGGTGTGATCGCCGCAGAGAAAGAAAGTTTTGTTAGTCCTTACTa < 2:2068694/150‑1 (MQ=255) ggCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTAGGTTTGAACGTGCAGAAAACGGTGATCTGACAGCGACTGCCATTGCAGGTGTGATCGCCGCAGAGATAGAAAGTTTTGTTAGTCCTTACTa < 1:1593950/150‑1 (MQ=255) gCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGTGATCTGACAGCGACTGCCATTGCAGGTGTGATCGCCGCAGAGAAAGAAAGTTTTGTTAGTCCTTACTAt < 1:1389383/150‑1 (MQ=255) tGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGTGATCTGACAGCGACTGCCATTGCAGGTGTGATCGCCGCAGAGAAAGAAAGTTTTGTTAGTCCTTa < 2:1469308/142‑1 (MQ=255) tGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGTGATCTGACAGCGACTGCCATTGCAGGTGTGATCGCCGCAGAGAAAGAAAGTTTTGTTAGTCCTTa > 1:1469308/1‑142 (MQ=255) tACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGTGATCTGACAGCGACTGCCATTGCAGGTGTGATCGCCGCAGAGAAAGAAAGTTTTGTTCCTCCTTACTACGacgccta > 2:1957660/1‑144 (MQ=255) cGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGTGATCTGACAGCGACTGCCATTGCAGGTGTGATCGCCGCAGAGAAAGAAAGTTTTGTTAGTCCTTACTATGAGTCTTACTg > 1:1657000/1‑150 (MQ=255) tgtTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTg > 2:1304305/1‑57 (MQ=255) tgtTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTg < 1:1304305/57‑1 (MQ=255) tgtTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGTGATCTGACAGCGACTGCCATTGCAGGTGTGATCGCCGCAGAGAAAGAAAGTTTTGTTAGTCCTTACTATGAGTCTTACTGgc > 2:2059437/1‑150 (MQ=255) gCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGTGATCTGACAGCGACTGCCATTGCAGGTGTGATCGCCGCAGAGAAAGAAAGTTTTGTTAGTCCTTACTATGAGTCTTACTGGCGCGGTa > 1:2021249/1‑150 (MQ=255) gCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGTGATCTGACAGCGACTGCCATTGCAGGTGTGATCGCCGCAGAGAAAGAAAGTTTTGTTAGTCCTTACTATGAGTCTTACTGGCGCGGTa < 2:2021249/150‑1 (MQ=255) aCTGCCATTGGAGTTTTTCACGAATGTTGAGTTTGAATTTGAACGTGCAGAAAACGGTGATCTGACAGCGACTGCCATTGCAGGTGTGATcgcc > 2:1406192/1‑94 (MQ=255) aCTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGCACGTTCAGAAAACGGTGATCTGACAGCGACTGCCATTGCAGGTGTGATCGCCGCAGAGAAAGAAAGTTTTGTTAGTcc < 1:1343233/120‑1 (MQ=255) aCTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGTGATCTGACAGCGACTGCCATTGCAGGTGTGATcgcc < 1:1406192/94‑1 (MQ=255) aCTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGTGATCTGACAGCGACTGCCATTGCAGGTGTGATCGCCGCAGAGAAAGAAAGTTTTGTTAGTcc > 2:1343233/1‑120 (MQ=255) aCTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGTGATCTGACAGCGACTGCCATTGCAGGTGTGATCGCCGCAGAGAAAGAAAGTTTTGTTAGTCCTTACTATGAGTCTTACTGGCGCGGTAgtgt < 1:9664/150‑1 (MQ=255) ccATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGTGATCTGACAGCGACTGCCATTGCAGGTGTGATCGCCGCAGAGAAAGAAAGTTTTGTTAGTCCTTACTATGAGTCTTACTGGCGCGGTAGTGTTGAt > 2:58539/1‑150 (MQ=255) ccATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGTGATCTGACAGCGACTGCCATTGCAGGTGTGATCGCCGCAGAGAAAGAAAGTTTTGTTAGTCCTTACTATGAGTCTTACTGGCGCGGTAGTGTTGAt < 2:1915712/150‑1 (MQ=255) | GGCTGGTCGCCATGGGGCCCAGTAACGGGCCGCAGAATATGCCTGGCCCGGAATACCGTTACTTGATTCCCGATGACAACGGTGATTACTCGGCGACGGTACTGCTTGATAAGGCCTGGGTGGCGTTGGCTACCGTGTTAAGCAAACTGCCATTGGAGTTTTTCACGAATGTTGAATTTGAATTTGAACGTGCAGAAAACGGTGATCTGACAGCGACTGCCATTGCAGGTGTGATCGCCGCAGAGAAAGAAAGTTTTGTTAGTCCTTACTATGAGTCTTACTGGCGCGGTAGTGTTGAT > NC_002947/2117071‑2117369 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |