| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,136,732 | A→T | 5.5% | L21Q (CTG→CAG) | fadE ← | medium‑long chain acyl‑CoA dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,136,732 | 0 | A | T | 5.5% | 339.4 / 7.9 | 111 | L21Q (CTG→CAG) | fadE | medium‑long chain acyl‑CoA dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base A (55/48); new base T (3/3); total (60/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.34e-01 | |||||||||||
Only 100 of 114 total aligned reads displayed.
GTTTGCGTCGCCACTGCGGGAGCGCAACCAGGGCGATCTTCAGGGCCAGCACCACCCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCTTGAGCCATTCCAGACAGCTTAGACGCAATGCTGTGAACGGCATGTTCAGAACAGTGACAGG > NC_002947/2136583‑2136881 | gTTTGCGTCGCCACTGCGGGAGCGCAACCAGGGCGATCTTCAGGGCCAGCACCACCCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCa < 2:1470884/150‑1 (MQ=255)gTTTGCGTCGCCACTGCGGGAGCGCAACCAGGGCGATCTTCAGGGCCAGCACCACCCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCa < 2:1470869/150‑1 (MQ=255) tttGCGTCGCCACTGCGGGAGCGCAACCAGGGCGATCTTCAGGGCCAGCACCACCCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAg > 1:410844/1‑150 (MQ=255) gTCGCCACTGCGGGAGCGCAACCAGGGCGATCTTCAGGGCCAGCACCACCCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGAACCTGCTGACGACATATGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCTGGCGcc > 2:62872/1‑150 (MQ=255) gCCACTGCGGGAGCGCAACCAGGGCGATCTTCAGGGCCAGCACCACCCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGt < 2:330978/150‑1 (MQ=255) aCTGCGGGAGCGCAACCAGGGCGATCTTCAGGGCCAGCACCACCCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGCAGATCGTCAAGGGCGCCTGGCGcccttgca < 1:62872/150‑7 (MQ=255) gCGGGAGCGCAACCAGGGCGATCTTCAGGGCCAGCACCACCCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCACCAGCACATAGGCCGCCCCGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGa < 1:1355330/150‑1 (MQ=255) gggAGCGCAACCAGGGCGATCTTCAGGGCCAGCACCACCCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAgg < 1:880907/150‑1 (MQ=255) gggAGCGCAACCAGGGCGATCTTCAGGGCCAGCACCACCCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAgg < 1:2293574/150‑1 (MQ=255) gggAGCGCAACCAGGGCGATCTTCAGGGCCAGCACCACCCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAgg > 2:2293574/1‑150 (MQ=255) cgcAACCAGGGCGATCTTCAGGGCCAGCACCACCCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTAcgc < 2:410844/150‑1 (MQ=255) cgcAACCAGGGCGATCTTCAGGGCCAGCACCACCCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTAcgc < 2:1578510/150‑1 (MQ=255) gcAACCAGGGCGATCTTCAGGGCCAGCACCACCCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTAcgcc > 1:577450/1‑150 (MQ=255) cAACCAGGGCGATCTTCAGGGCCAGCACCACCCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTAcgccg > 2:1894175/1‑150 (MQ=255) aaCCAGGGCGATCTTCAGGGCCAGCACCACCCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTAcgccgc < 1:1098357/150‑1 (MQ=255) ccAGGGCGATCTTCAGGGCCAGCACCACCCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTAcgccgcgc > 1:1649972/1‑150 (MQ=255) ccAGGGCGATCTTCAGGGCCAGCACCACCCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTAcgccgcgc < 1:1894175/150‑1 (MQ=255) cTTCAGGGCCAGCACCACCCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAg > 1:583846/1‑150 (MQ=255) ttCAGGGCCAGCACCACCCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGc > 1:785843/1‑150 (MQ=255) tCAGGGCCAGCACCACCCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGca < 2:2192817/150‑1 (MQ=255) ggCCAGCACCACCCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGt < 1:1160243/125‑1 (MQ=255) ggCCAGCACCACCCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGt > 2:1160243/1‑125 (MQ=255) ccAGCACCACCCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTAcgccgcgcc > 1:375814/1‑133 (MQ=255) ccAGCACCACCCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTAcgccgcgcc < 2:375814/133‑1 (MQ=255) ccAGCACCACCCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCAccacca > 2:1083459/1‑150 (MQ=255) aGCACCACCCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCaccaac < 2:583846/150‑1 (MQ=255) gCACCACCCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGGGGTACGCCGCGCCGATCACCAGCACCaccaacc > 1:2199478/1‑150 (MQ=255) caccacCCAGATCAGCGCCAGCAGCCAGCCGGTGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGgcg < 1:159830/105‑1 (MQ=255) caccacCCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGgcg > 2:159830/1‑105 (MQ=255) caccCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAgg < 2:1877844/115‑1 (MQ=255) caccCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAgg > 1:1877844/1‑115 (MQ=255) caccCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCacaa < 1:567490/150‑1 (MQ=255) accCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCacaac > 1:2054940/1‑150 (MQ=255) accCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCacaac > 1:1775991/1‑150 (MQ=255) cccAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCacaacc > 2:425487/1‑149 (MQ=255) ccAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAg > 2:1710419/1‑150 (MQ=255) ccAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAg > 1:1153729/1‑150 (MQ=255) ccAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAg > 1:1646002/1‑150 (MQ=255) cAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGCGAATCTGCAAGAGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGc > 2:192822/1‑150 (MQ=255) tCAGCGCCAGCAGCCAGCCGGGGGCCCAGGTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACa > 1:1244490/1‑150 (MQ=255) gcgcCGGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGt > 2:336497/1‑100 (MQ=255) gcgcCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATaa < 2:1186333/150‑1 (MQ=255) cagcagCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCTGGCGccct > 2:1273147/1‑89 (MQ=255) cagcagCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCTGGCGccct < 1:1273147/91‑3 (MQ=255) cagcagCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCgg > 1:444053/1‑150 (MQ=255) cagccGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTcctcct > 2:1477055/1‑150 (MQ=255) gccGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTg < 2:2112848/150‑1 (MQ=255) ggggCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAAc > 2:554507/1‑150 (MQ=255) ggggCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAAc < 1:160727/150‑1 (MQ=255) aCTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAgg < 2:444053/150‑1 (MQ=255) aCTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAgg > 1:654655/1‑150 (MQ=255) aCTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAgg < 2:17077/150‑1 (MQ=255) cctgAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCt < 1:108529/149‑1 (MQ=255) ctgAAACTGCCCATCAAAAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCtt > 2:629194/1‑150 (MQ=255) ctgAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAg > 1:1469025/1‑116 (MQ=255) ctgAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAg < 2:1469025/116‑1 (MQ=255) taaaaTGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCTTGa < 1:191537/149‑1 (MQ=255) cccATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGcac > 2:1645911/1‑92 (MQ=255) cccATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGcac < 1:1645911/92‑1 (MQ=255) cccATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCTTGAGCCATTc < 1:425487/150‑1 (MQ=255) cccATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCTTGAGCCATTc < 2:2054940/150‑1 (MQ=255) cATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCacaaca < 1:34564/104‑1 (MQ=255) aTCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCTTAACCCATTCCAg > 1:492602/1‑150 (MQ=255) tCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGTGTGAGGTACGCCGCGCCGATCACCAGCACCACCAGGAAAAACACCTACATAATCGGGCCACCTTGGAACCAAGGGCTTGAGCCATTCCAGa > 2:1243656/1‑150 (MQ=255) aaCAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCTTGAGCCATTCCAGACa < 1:1493656/150‑1 (MQ=255) cAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCtt < 1:1417184/119‑1 (MQ=255) aGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCAc > 1:1981617/1‑77 (MQ=255) aGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCAc < 2:1981617/77‑1 (MQ=255) aGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCTTGAGCCATTCCAGACAGCt < 1:1710419/150‑1 (MQ=255) aGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCTTGAGCCATTCCAGACAGCt < 1:1083459/150‑1 (MQ=255) acaTAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGATCCTCCTTGAAACAAAGGGCTTGAGCCATTCCAGACAGCTTAg > 1:1978397/1‑150 (MQ=255) caTAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCTTGAGCCATTCCAGACAGCTTAGa > 2:74194/1‑150 (MQ=255) aTAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCTTGAGCCATTCCAGACAGCTTAGAc > 1:795936/1‑150 (MQ=255) aTAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGACCGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCTTGAGCCATTCCAGACAGCTTAGAc > 1:1496307/1‑150 (MQ=255) tAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCgg > 1:327301/1‑45 (MQ=255) tAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCgg < 2:327301/45‑1 (MQ=255) gccACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCTTGAGCCATTCCAGACAGCTTAGACGCAATGc > 1:2437349/1‑150 (MQ=255) ccACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCTTGAGCCATTCCAGACAGCTTAGACGCAATGCt < 1:1477055/150‑1 (MQ=255) cACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCTTGAGCCATTCCAGACAGCTTAGACGCAATGCtg < 2:293425/150‑1 (MQ=255) gATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTAcgccgcgc < 2:245960/53‑1 (MQ=255) gATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTAcgccgcgc > 1:245960/1‑53 (MQ=255) aTGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCTTGAGCCATTCCAGACAGCTTAGACGCAATGCTGTGaa < 2:654655/150‑1 (MQ=255) tGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACTGCAACATAATCGGTCCTCCTTGGAACCAAGGGCTTGAGCCATTCCAGACAGCTTAGACGCAATGCTGTGAAc < 1:1348017/150‑1 (MQ=255) cGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCTTGAGCCATTCCAGACAGCTTAGACGCAATGCTGTGAACGGc < 2:1646002/150‑1 (MQ=255) gagaATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCTTGCGCCAGGCCAGACAGCTTAGACGCAATGCTGTGAACGGCa > 2:2017058/1‑150 (MQ=255) gagaATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCTTGAGCCATTCCAGACAGCTTAGACGCAATGCTGTGAACGGCa > 1:439484/1‑150 (MQ=255) gagaATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCTTGAGCCATTCCAGACAGCTTAGACGCAATGCTGTGAACGGCa > 2:819355/1‑150 (MQ=255) agaATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCTTGAGCCATTCCAGACAGCTTAGACGCAATGCTGTGAACGGCAt > 1:1918691/1‑150 (MQ=255) tGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCTTGAGCCATTCCAGACAGCTTAGACGCAATGCt > 2:1790254/1‑133 (MQ=255) tGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCTTGAGCCATTCCAGACAGCTTAGACGCAATGCt < 1:1790254/133‑1 (MQ=255) gccaGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCTTGAGCCATTCCAGACAGCTTAGACGCAATGCTGTGAACGGCATGTTCAGa > 2:387475/4‑150 (MQ=255) cAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCTTGAGCCATTCCAGACAGCTTAGACGCAATGCTGTGAACGGCATGTTCAGaa < 2:1918691/150‑1 (MQ=255) accggCGCCTGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCTTGAGCCATTCCAGACa > 1:778265/4‑114 (MQ=255) accggCGCCTGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCTTGAGCCATTCCAGACa < 2:778265/111‑1 (MQ=255) gggCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCTTGAg < 1:312633/100‑1 (MQ=255) gggCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCTTGAg > 2:312633/1‑100 (MQ=255) gcgcCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCTTGAGCCATTCCAGACAGCTTAGACGCAATGCTGTGAACGGTATGTTCAGAACAGTg > 2:153772/1‑150 (MQ=255) gcCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCTTGAGCCATTCCAGACAGCTTAGACGCAATGCTGTGAACGGCATGTTCAGAACAGTGAc > 2:1265733/1‑150 (MQ=255) cAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCTTGAGCCATTCCAGACAGCTTAGACGCAATGCTGTGAACGGCATGTTCAGAACAGTGACAg > 2:464612/1‑150 (MQ=255) aGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCTTGAGCCATTCCAGACAGCTTAGACGCAATGCTGTGAACGGCATGTTCAGAACAGTGACAgg < 1:1265733/150‑1 (MQ=255) | GTTTGCGTCGCCACTGCGGGAGCGCAACCAGGGCGATCTTCAGGGCCAGCACCACCCAGATCAGCGCCAGCAGCCAGCCGGGGGCACTGCTGAAAATGCCCATCAACAGCACATAGGCCGCCACGATGCCGAGAATCTGCAAGGGCGCCAGGCGCCGGTGCGTGAGGTACGCCGCGCCGATCACCAGCACCACCAACCACAACAGCAACATAATCGGTCCTCCTTGGAACCAAGGGCTTGAGCCATTCCAGACAGCTTAGACGCAATGCTGTGAACGGCATGTTCAGAACAGTGACAGG > NC_002947/2136583‑2136881 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |