| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,239,878 | T→G | 5.3% | Y22D (TAC→GAC) | gltX → | glutamate‑‑tRNA ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,239,878 | 0 | T | G | 5.3% | 326.8 / 5.1 | 110 | Y22D (TAC→GAC) | gltX | glutamate‑‑tRNA ligase |
| Reads supporting (aligned to +/- strand): ref base T (51/53); new base G (2/4); total (53/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.80e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01 | |||||||||||
Only 100 of 111 total aligned reads displayed.
AAGTGACGTTCGCGCCATTGCTGGAGCCCGGTGCCCGCCTCCTGCTAACATCCCGCCTTTGTTTCATCTTTCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTCCACGCGTGAGTCGGAGCAACAGATCTTCGACGCCCTGCGCTGGCTTGGCATCGAATGGAACGA > NC_002947/2239729‑2240026 | aGTGACGTTCGCGCCATTGCTGGAGCCCGGTGCCCGCCTCCTGCTAACATCCCGCCTTTGTTTCATCTTTCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTa < 2:2382283/150‑1 (MQ=255) cGTTCGCGCCATTGCTGGAGCCCGGTGCCCGCCTCCTGCTAACATCCCGCCTTTGTTTCATCTTTCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTAGGCAGTGCCGAC‑Atgg < 1:240260/150‑3 (MQ=255) gcCATTGCTGGAGCCCGGTGCCCGCCTCCTGCTAACATCCCGCCTTTGTTTCATCTTTCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGtt < 1:410982/150‑1 (MQ=255) ccATTGCTGGAGCCCGGTGCCCGCCTCCTGCTAACATCCCGCCTTTGTTTCATCTTTCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTc < 2:786855/150‑1 (MQ=255) aTTGCTGTAGCCCGGTGCCCGCCTCCTGCTAACATCCCGCCTTTGTTTCATCTTTCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCaa < 2:718072/150‑1 (MQ=255) aTTGCTGGAGCCCGGTGCCCGCCTCCTGCTAACATCCCGCCTTTGTTTCATCTTTCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCaa < 2:676650/150‑1 (MQ=255) ttGCTGGAGCCCGGTGCCCGCCTCCTGCTAACATCCCGCCTTTGTTTCATCTTTCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAac < 1:735608/150‑1 (MQ=255) tGGAGCCCGGTGCCCGCCTCCTGCTAACATCCCGCCTTTGTTTCATCTTTCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTAGGCAGTGCCGAC‑Atgggg > 2:937928/1‑133 (MQ=255) cccGGTGCCCGCCTCCTGCTAACATCCCGCCTTTGTTTCATCTTTCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCttt > 2:1694337/1‑150 (MQ=255) cccGGTGCCCGCCTCCTGCTAACATCCCGCCTTTGTTTCATCTTTCGTTCGAGACTCTCCATGAACACCGTACGCATTTTTATTGC‑CAAGCAGCCGACGGGCTACCCCCTTTTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCttt < 1:1486617/150‑1 (MQ=255) tGCCCGCCTCCTGCTAACATCCCGCCTTTGTTTCATCTTTCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTgagaa < 1:938214/150‑5 (MQ=255) cGCCTCCTGCTAACATCCCGCCTTTGTTTCCTATTGCTGTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAagcag > 1:2410143/1‑150 (MQ=255) gCCTCCTGCTAACATCCCGCCTTTGTTTCATCTTTCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAagcagc > 1:1788135/1‑150 (MQ=255) cctcctGCTAACATCCCGCCTTTGTTTCATCTTTCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAgcagca < 1:1694337/150‑1 (MQ=255) tGCTAACATCCCGCCTTTGTTTCATCTTTCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAagca < 1:171438/142‑1 (MQ=255) tGCTAACATCCCGCCTTTGTTTCATCTTTCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCAcggcg > 2:302321/1‑150 (MQ=255) cTAACATCCCGCCTTTGTTTCATCTTTCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGt < 2:616319/150‑1 (MQ=255) cTAACATCCCGCCTTTGTTTCATCTTTCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGt < 1:2060593/150‑1 (MQ=255) aaCATCCCGCCTTTGTTTCATCTTTCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGa < 2:1788135/150‑1 (MQ=255) tCCCGCCTTTGTTTCATCTTTCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTAGGCAGTGCCGAC‑At > 1:858582/1‑104 (MQ=255) tCCCGCCTTTGTTTCATCTTTCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTAGGCAGTGCCGAC‑At < 2:858582/104‑1 (MQ=255) ccGCCTTTGTCTAATCTCTCAATGGAGAGTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCAt > 2:585807/1‑150 (MQ=255) cGCCTTTGTTTCATCTTTCGTTCGAGACTCTCCATGACCACCGTACGCTCGCTTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGCTCATc > 2:2171504/1‑150 (MQ=255) cGCCTTTGTTTCATCTTTCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCttt < 1:1084695/123‑1 (MQ=255) cGCCTTTGTTTCATCTTTCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCttt > 2:1084695/1‑123 (MQ=255) cGCCTTTGTTTCATCTTTCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATc > 1:1830096/1‑150 (MQ=255) ccTTTGTTTCATCTTTCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGc < 2:575001/123‑1 (MQ=255) ccTTTGTTTCATCTTTCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGc > 1:575001/1‑123 (MQ=255) tttGTTTCATCTTTCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTgc < 2:1794640/150‑1 (MQ=255) tttGTTTCATCTTTCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTgc < 1:1360841/150‑1 (MQ=255) gTTTCATCTTTCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCa > 2:647994/1‑150 (MQ=255) ttCATCTTTCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATc > 2:1142763/1‑150 (MQ=255) cATCTTTCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATcc > 1:765356/1‑140 (MQ=255) aTCTTTCGTTCGAGACTCTCCATGCCGTCCGTATGAGCGGGTGTTGGGCGATC‑ATCGCCCATCCACCCCCATGTCCGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGACAAGCAGCAAGGCGGTGAGTTCATCCGTCTCATCGaa < 2:1106763/150‑1 (MQ=255) aTCTTTCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGaa < 1:1257617/150‑1 (MQ=255) aTCTTTCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGaa < 2:1830096/150‑1 (MQ=255) tttCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTgcg > 1:1944518/1‑140 (MQ=255) tttCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTgcg < 2:1944518/140‑1 (MQ=255) tttCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGac > 1:1269836/1‑150 (MQ=255) tttCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGac > 1:1137946/1‑150 (MQ=255) ttcgttcgAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCaa > 1:1672475/1‑112 (MQ=255) ttcgttcgAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCaa < 2:1672475/112‑1 (MQ=255) tcgttcgAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCACCTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGacac < 2:912578/150‑1 (MQ=255) gttcgAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCg > 2:2425757/1‑150 (MQ=255) ttcnAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGa > 2:1508752/1‑150 (MQ=255) ttcgAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGa > 1:293584/1‑150 (MQ=255) tcgAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGAt < 1:302321/150‑1 (MQ=255) gaCTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGc > 1:2424149/1‑150 (MQ=255) tctcCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCAt < 2:1546905/121‑1 (MQ=255) tctcCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCAt > 1:1546905/1‑121 (MQ=255) cATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTc < 2:2028254/79‑1 (MQ=255) cATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTc > 1:2028254/1‑79 (MQ=255) aTGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTcc > 1:983503/1‑150 (MQ=255) caccGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTgc > 2:1987914/1‑116 (MQ=255) caccGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTgc < 1:1987914/116‑1 (MQ=255) caccGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTCCAcgcg > 1:1546598/1‑150 (MQ=255) tctgttcgcacgcGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTCCACGCGt < 2:1450156/144‑1 (MQ=255) accGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGCCCCCCAGGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCACCGAAGACACCGATCAGCTGCGCTCCACGCGt < 1:1959141/150‑1 (MQ=255) accGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCCCGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTCCACGCGt < 2:808554/150‑1 (MQ=255) accGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGaa < 1:1058584/123‑1 (MQ=255) accGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGaa > 2:1058584/1‑123 (MQ=255) accGTACGCACGCGTATTGCGCCATC‑GCCTACCGGAGCGCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTCCACGCGt < 2:2410143/150‑1 (MQ=255) tACGCACGCGTATTGCGCCATC‑GCCTACCGGCGCCCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTCCACGCGTGAGt < 1:2284569/150‑1 (MQ=255) cgcacgcGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTCCACGCGTGAGTCg < 1:1320910/150‑1 (MQ=255) cgcacgcGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTCCACGCGTGAGTCg < 2:293584/150‑1 (MQ=255) gcacgcGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTCCACGCGTAAGGCgg > 2:852595/1‑150 (MQ=255) acgcGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTCCACGCGTGAGTCGGAg > 2:645473/1‑150 (MQ=255) cgTATTGCGCCATC‑GCCTACCGGCGACCACCCTGCCGGCCACACGGACTACTACCCTCTT‑TACTACTGCTTTGCCAAGCAGCACGGCGGTGCGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTCCACGCGTGAGTCGGAGCaa < 2:1242164/150‑1 (MQ=255) gcCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCACATACTGCTTTGCCAAGCAGGACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTCCACGCGTGAGGCGGAGCAACAGATCtt > 1:1490129/1‑150 (MQ=255) gcCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTCCACGCGTGAGTCGGAGCAACAGATCtt > 2:1486230/1‑150 (MQ=255) ccATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTCCACGCGTGAGTCGGAGCAACAGATCTTc < 1:1273851/150‑1 (MQ=255) cATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTCCACGCGTGAGTCGGAGCAACAGATCTTCg > 2:877913/1‑150 (MQ=255) c‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTCCACGCGTGAGTCGGAGCAACAGATCTTCGACg < 2:1269836/150‑1 (MQ=255) gCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTGGTCCTGCGCATCGaa > 1:147093/1‑97 (MQ=255) gCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGaa < 2:147093/97‑1 (MQ=255) ccTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATAGCGGAAACGAATCAGCTTCGCTCCACGCGTGAGTCGGAGCAACAGATCTTCGACGcc > 2:663587/1‑150 (MQ=255) cTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTCCACGCGTGAGTCGGAGCAACAGATCTTCGACGccc > 1:1764234/1‑150 (MQ=255) tACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTgcgc < 2:1291110/112‑1 (MQ=255) tACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTgcgc > 1:1291110/1‑112 (MQ=255) tACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTCCACGCGTGAGTCGGAGCAACAGATCTTCGACGCCCt > 2:2152570/1‑150 (MQ=255) tACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTCCACGCGTGAGTCGGAGCAACAGATCTTCGACGCCCt < 2:323260/150‑1 (MQ=255) cGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTCCACGCGTGAGTCGGAGCAACAGATCTTCGACGCCCTgcg > 1:1457168/1‑150 (MQ=255) cGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTCCACGCGTGAGTCGGAGCAACAGATCTTCGACGCCCTgcg > 2:1736189/1‑150 (MQ=255) gCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTCCACGCGTGAGTCGGAGCAACAGATCTTCGACGCCCTGCGCt < 1:2425757/150‑1 (MQ=255) gACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTCCACGCGTGAGTCGGAGCAACAGATCTTCGACGCCCTGCGCTgg < 1:585807/150‑1 (MQ=255) ccccATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTCCACGCGTGa > 1:865553/1‑113 (MQ=255) ccccATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTCCACGCGTGa < 2:865553/113‑1 (MQ=255) ccccATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTCCACGCGTGAGTCGGAGCAACAGATCTTCGACGCCCTGCGCTGGCtt < 2:1546598/150‑1 (MQ=255) tCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTCCACGCGTGAGTCGGAGCAACAGATCTTCGACGCCCTGCGCTGGCTTGGCATCg > 2:1761025/1‑150 (MQ=255) gCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCAcggcgg > 2:883711/1‑52 (MQ=255) gCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCAcggcgg < 2:427135/52‑1 (MQ=255) gCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCAcggcgg > 1:427135/1‑52 (MQ=255) gCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCAcggcgg < 1:883711/52‑1 (MQ=255) gCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTCCACGCGTGAGTCGGAGCAACAGATCTTCGACGCCCTGCGCTGGCTTGGCATCGAAt < 1:2152570/150‑1 (MQ=255) gCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTCCACGCGTGAGTCGGAGCAACAGATCTTCGACGCCCTGCGCTGGCTTGGCATCGAAt < 2:2087744/150‑1 (MQ=255) aCTGCATAC‑ATCGCCCTATTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCAGCGAAGACACCGATCAGCTGCGCTCCACGCGTGAGGCGGAGCAACAGATCTTCGACGCCCTGCGCTGGCTTGGCATCGAATgg > 2:1909327/1‑150 (MQ=255) tGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTCCACGCGTGAGTCGGAGCAACAGATCTTCGACGCCCTGCGCTGGCTTGGCATCGAATGGaa < 1:1142763/150‑1 (MQ=255) tGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTCCACGCGTGAGTCGGAGCAACAGATCTTCGACGCCCTGCGCTGGCTTGGCATCGAATGGaa < 1:1761025/150‑1 (MQ=255) cTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTCCACGCGTGAGTCGGAGCAACAGATCTTCGACGCCCTGCGCTGGCTTGGCATCGAATGGAACGa > 2:1687265/1‑150 (MQ=255) cTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTCCACGCGTGAGTCGGAGCAACAGATCTTCGACGCCCTGCGCTGGCTTGGCATCGAATGGAACGa > 1:268958/1‑150 (MQ=255) | AAGTGACGTTCGCGCCATTGCTGGAGCCCGGTGCCCGCCTCCTGCTAACATCCCGCCTTTGTTTCATCTTTCGTTCGAGACTCTCCATGACCACCGTACGCACGCGTATTGCGCCATC‑GCCTACCGGCGACCCCCATGTCGGCACTGCCTAC‑ATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGCACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGATCAGCTGCGCTCCACGCGTGAGTCGGAGCAACAGATCTTCGACGCCCTGCGCTGGCTTGGCATCGAATGGAACGA > NC_002947/2239729‑2240026 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |