| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,246,285 | A→G | 7.3% | intergenic (+31/+60) | ibpA → / ← PP_1983 | small heat shock protein IbpA/PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,246,285 | 0 | A | G | 7.3% | 326.4 / 10.5 | 110 | intergenic (+31/+60) | ibpA/PP_1983 | small heat shock protein IbpA/PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase |
| Reads supporting (aligned to +/- strand): ref base A (45/57); new base G (6/2); total (51/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.41e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.65e-01 | |||||||||||
Only 100 of 110 total aligned reads displayed.
GCCGCCGGCCTGGCCAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCAGATAACCCTGGTACAGATG > NC_002947/2246144‑2246431 | gccgccGGCCTGGCCAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGcc < 2:1217991/150‑1 (MQ=255) gCCTGGCCAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTc > 2:88145/1‑150 (MQ=255) cAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGcc < 2:1786830/136‑1 (MQ=255) cAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGcc > 1:1786830/1‑136 (MQ=255) cAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCtttt < 2:1884655/141‑1 (MQ=255) cAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCtttt > 1:1884655/1‑141 (MQ=255) cAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCtt < 1:307125/139‑1 (MQ=255) cAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCtt > 2:307125/1‑139 (MQ=255) cAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTtc > 1:513829/1‑150 (MQ=255) cAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTtc > 2:1108629/1‑150 (MQ=255) aaTGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCTGGAGGTGCCCtttttttcgt < 2:744576/146‑6 (MQ=255) aaTGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTtct > 2:847046/1‑150 (MQ=255) aaTGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTtct > 2:1761998/1‑150 (MQ=255) aaTGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATAGC‑GCGGCAACGAAAAAAAGGGCACCTCTGGAGGTGCCCtttttttcgt > 1:744576/1‑141 (MQ=39) ggCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑c < 1:847046/150‑1 (MQ=255) gCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑Cg > 1:76287/1‑150 (MQ=255) cTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCa > 2:519208/1‑150 (MQ=255) cTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCa < 2:2288201/150‑1 (MQ=255) cTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTc < 1:2067536/150‑1 (MQ=255) cAGCATCGACCGGGCGCGCATCGCGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTccc < 1:265862/150‑1 (MQ=255) cATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑c < 1:2171439/139‑1 (MQ=255) cATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑c > 2:2171439/1‑139 (MQ=255) aTCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGt > 2:2417412/1‑150 (MQ=255) tCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTa < 2:76287/150‑1 (MQ=255) cGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAg < 1:2417412/150‑1 (MQ=255) aTCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTc > 2:151892/1‑150 (MQ=255) cGTGCCTGAAGAAGCCACGGGCGAGCGCGGGCGTAGCAAGATCGACAAACCAGCGGTGCACT‑TTCAACGCTTGAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTATGTGCGCGTCCGTCAt < 1:1224016/150‑1 (MQ=255) cTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAGCCAGCGCTGAACTGATCGA‑GCTGCAACTATAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGAt > 1:1993339/1‑150 (MQ=255) cTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGAt < 2:2375603/150‑1 (MQ=255) tGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCGCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGACCGTCATGCGATc > 2:1300436/1‑150 (MQ=255) agCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCATCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAAt < 2:1487886/150‑1 (MQ=255) agCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAAt < 1:460918/150‑1 (MQ=255) agCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAAt < 1:519208/150‑1 (MQ=255) ccaaggccaagCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAATGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCt < 1:948006/150‑1 (MQ=255) caaggccaagCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTg > 1:115039/1‑150 (MQ=255) ggccaagCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGCTTATTTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCg > 1:747502/1‑150 (MQ=255) gccaagCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTAGTGCTAGTTC‑CCCAGGCCCGCGTAGGTACGCGGCCGTCATGCGATCAGTAATCTGCCgg > 2:1244277/1‑150 (MQ=255) ccaagCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGgc < 2:931061/150‑1 (MQ=255) caagCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGc > 1:2442590/1‑131 (MQ=255) caagCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGc < 2:2442590/131‑1 (MQ=255) cATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCa > 2:2159761/1‑150 (MQ=255) aTTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAg > 2:276705/1‑150 (MQ=255) ttCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCGGCGGAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGc > 1:671229/1‑150 (MQ=255) ttCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGc > 2:2025398/1‑150 (MQ=255) ccGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCaa < 1:276705/150‑1 (MQ=255) cGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAAc < 1:2025398/150‑1 (MQ=255) gATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACa > 1:884328/1‑150 (MQ=255) cAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCt < 1:2132048/150‑1 (MQ=255) aTGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGc > 2:1409490/1‑150 (MQ=255) aTGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGc < 1:151892/150‑1 (MQ=255) tGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGcc < 2:107743/150‑1 (MQ=255) ggCGACAATCCAGCTCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCg < 1:110828/150‑1 (MQ=255) gAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGaca > 2:256176/1‑148 (MQ=255) gAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGaaa > 1:2114181/1‑150 (MQ=255) gAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGaaa < 1:1300436/150‑1 (MQ=255) aaaCCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTc < 1:88145/150‑1 (MQ=255) aCCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCcg < 1:2059245/150‑1 (MQ=255) cAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCcggg > 1:2040151/1‑149 (MQ=255) gcTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCcggtaacg > 1:1036935/1‑150 (MQ=255) gcTGAACTGAACGA‑GCCGGAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGAGGTGCGTATAGCA‑TCCCGCGTCGGTGCGCGGCCGTCATGAGCTCAGTAAACTGCCGAGTTCATTAGCAACATCTGCCGAAACTCcggtaacg < 1:1751835/150‑1 (MQ=255) cTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCcggtaacgg > 2:1751835/1‑150 (MQ=255) aaCTGATCGA‑GCTGCAACGAAAAAAAGTGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCGCCAGCAACATCTGCCCAAACTCcggtaacggtac < 2:271795/150‑2 (MQ=255) aCTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGCTAACGGTAAt < 2:1036935/150‑1 (MQ=255) gATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGc < 2:1994750/150‑1 (MQ=255) aTCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGcc < 2:884328/150‑1 (MQ=255) tCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGc < 2:943428/124‑1 (MQ=255) tCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGc > 1:943428/1‑124 (MQ=255) cTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGGCTTCGCGTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCtgt < 1:61389/150‑1 (MQ=255) tGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCtgtg > 1:1146901/1‑150 (MQ=255) tGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCtgtg < 2:1146901/150‑1 (MQ=255) cAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATg < 2:1659787/79‑1 (MQ=255) cAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATg > 1:1659787/1‑79 (MQ=255) cAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCa < 2:1661753/150‑1 (MQ=255) cAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCa < 2:2081626/150‑1 (MQ=255) aaCGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGc > 2:76351/1‑41 (MQ=255) aaCGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGc < 1:76351/41‑1 (MQ=255) aaCGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTTCAg > 1:1797689/1‑150 (MQ=255) gAAAAAAAGGGAACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCAGATa > 2:2322536/1‑150 (MQ=255) aaaaaaaGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAAt < 2:2150513/132‑1 (MQ=255) aaaaaaaGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAAt > 1:2150513/1‑132 (MQ=255) aaaaaaaGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCAGATaa < 2:115039/150‑1 (MQ=255) aaaaGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTACCGAAAATGTTCTGCTGTGCAGATAAccc < 2:2040151/150‑1 (MQ=255) aaaGGGCACCTCTGGAGGTGCCTTTTTTCGTGCCTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCAGATAACCCt > 1:1000125/1‑150 (MQ=255) aaaGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCAGATAACCCt < 2:657042/150‑1 (MQ=255) aGGGCACCTCTGGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACTGTAATGGCCGGCTGTGCAGATAACCCTgg > 2:2184639/1‑150 (MQ=255) aGGGCACCTCTGGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCAGATAACCCTgg > 1:603382/1‑150 (MQ=255) aGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCAGATAACCCTgg < 1:1098185/150‑1 (MQ=255) gggCACCTCTGGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCAGATAACCCTGGt > 1:1455236/1‑150 (MQ=255) ggCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCAGATAACCCTGGTa < 2:728460/150‑1 (MQ=255) ccTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCCGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCAGATAACCCTGGTACAGa < 1:1108629/150‑1 (MQ=255) ccTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCAGATAACCCTGGTACAGa < 1:1761998/150‑1 (MQ=255) cTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGc < 1:1093409/89‑1 (MQ=255) cTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGc > 2:1093409/1‑89 (MQ=255) cTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCAGATAACCCTGGTACAGAt < 1:2159761/150‑1 (MQ=255) cTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCAGATAACCCTGGTACAGAt < 2:1993339/150‑1 (MQ=255) cTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCAGATAACCCTGGTACAGAt < 2:1481993/150‑1 (MQ=255) cTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCAGATAACCCTGGTACAGAt > 1:2184419/1‑150 (MQ=255) tCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCAGATAACCCTgg > 1:1643573/1‑142 (MQ=255) tCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCAGATAACCCTgg < 2:1643573/142‑1 (MQ=255) tCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCAGATAACCCTGGTACAGATg < 2:1797689/150‑1 (MQ=255) | GCCGCCGGCCTGGCCAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGA‑GCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCA‑CGCAGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCAGATAACCCTGGTACAGATG > NC_002947/2246144‑2246431 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |