| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,362,908 | C→T | 5.9% | V338I (GTC→ATC) | PP_2076 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,362,908 | 0 | C | T | 5.9% | 225.4 / 2.0 | 80 | V338I (GTC→ATC) | PP_2076 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (41/34); new base T (3/2); total (44/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GACGCCGCGCTCGAACTGCGCCATGTGCGGCTTCATGCGTTCATCATGGGCATCGGCCTGTTGCCTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCAGCAGCTTGCGCTCGTTGTCGACCCCGGGCTCCACAGTTCGCGCCAGCCACTGGGTTTTCACATCCTCGACAGCGGCGTTGCGCCAGG > NC_002947/2362762‑2363057 | gACGCCGCGCTCGAACTGCGCCATGTGCGGCTGCATGCGTTCATCATGGGCATCGGCCTGTTGCCTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGAt > 1:426637/1‑150 (MQ=17) gcTCGAACTGCGCCATGTGCGGCTTCATGCGTTCATCATGGGCATCGGCCTGTTGCCTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCgg > 1:2088343/1‑150 (MQ=35) cGAACTGCGCCATGTGCGGCTTCATGCGTTCATCATGGGCATCGGCCTGTTGCCTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGcca < 2:361218/150‑1 (MQ=35) aCTGCGCCATGTGCGGCTTCATGCGTTCATCATGGGCATCGGCCTGTTGCCTGGCCCGTTCGGAGAGCAAGTAGATGTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGGTGTTGATGATGTGCGCGGccacca > 2:1135203/1‑150 (MQ=11) gCTTCATGCGTTCATCATGGGCATCGGCCTGTTGCCTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCt > 1:2452250/1‑150 (MQ=40) ttCATGCGTTCATCATGGGCATCGGCCTGTTGCCTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCttt < 2:2088343/150‑1 (MQ=40) tCATGCGTTCATCATGGGCATCGGCCTGTTGCCTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCCGCTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCtttt < 1:1222595/150‑1 (MQ=255) aTGCGTTCATCATGGGCATCGGCCTGTTGCCTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTGTTCg > 1:1274524/1‑150 (MQ=38) tgggTTCATCATGGGCATCGGCCTGTTGCCTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGa < 2:400616/147‑1 (MQ=38) tGCGTTCATCATGGGCATCGGCCTGTTGCCTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGAACTTTTTCGGCCAGGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGa > 2:1306308/1‑150 (MQ=255) gCGTTCATCATGGGCATCGGCCTGTTGCCTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGAt < 1:211307/150‑1 (MQ=38) gTTCATCATGGGCATCGGCCTGTTGCCTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGc > 1:1587626/1‑116 (MQ=31) gTTCATCATGGGCATCGGCCTGTTGCCTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGc < 2:1587626/116‑1 (MQ=31) gTTCATCATGGGCATCGGCCTGTTGCCTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGTGTAGAGCTTTTCGAttt < 1:1584640/150‑1 (MQ=255) gTTCATCATGGGCATCGGCCTGTTGCCTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGAttt > 2:67974/1‑150 (MQ=39) ttCATCATGGGCATCGGCCTGTTGCCTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTc > 1:2316171/1‑150 (MQ=37) ttCATCATGGGCATCGGCCTGTTGCCTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGAGAATAACAGACCGCGATGCCACGGTCTGGGGGTAGAGCTTTTCGATTTc > 1:1738561/1‑150 (MQ=11) ttCATCAGGGGCAGCGGCCTGTTGCCTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTc < 2:876028/150‑1 (MQ=255) catcatGGGCTTTGTCCTGTTGCCTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGTACTTTTTCGTCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCa < 2:1049875/150‑1 (MQ=11) catcatGGGCATCGGCCTGTTGCCTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCa < 1:1899965/150‑1 (MQ=38) tcatGGGCATCGGCCTGTTGCCTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGATGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGa > 1:1697046/1‑150 (MQ=255) tcatGGGCATCGGCCTGTTGCCTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGa > 1:18586/1‑150 (MQ=39) tcatGGGCATCGGCCTGTTGCCTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGa > 2:1003816/1‑150 (MQ=39) catGGGCATCGGCCTGTTGCCTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGaa > 1:35935/1‑150 (MQ=40) atGGGCATCGGCCTGTTGCCTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGaaa < 1:49110/150‑1 (MQ=40) tGGGCATCGGCCTGTTGCCTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAAc < 2:1437178/150‑1 (MQ=40) gCATCGGCCTGTTGCCTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGc > 2:1317302/1‑105 (MQ=31) gCATCGGCCTGTTGCCTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGc < 1:1317302/105‑1 (MQ=31) aTCGGCCTGTTGCCTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCtttt > 2:70544/1‑131 (MQ=39) aTCGGCCTGTTGCCTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCtttt < 1:70544/131‑1 (MQ=39) tCGGCATGTTGCCTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTgc < 2:737781/150‑1 (MQ=255) ggCCTGTTGCCTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGATGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTgcgc < 2:1697046/150‑1 (MQ=255) gCCTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACcagca < 1:1438944/150‑1 (MQ=255) cTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCagcagc < 2:2316171/150‑1 (MQ=255) tGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTa > 1:636271/1‑109 (MQ=35) tGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTa < 2:636271/109‑1 (MQ=38) ggCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGATACGACTGCGCGACCAGCAGCtt < 1:1891837/150‑1 (MQ=255) ggCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCAGCAGCtt < 2:2452250/150‑1 (MQ=255) ccGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCAGCAGCTTgcg > 2:1664686/1‑150 (MQ=255) ccGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCAGCAGCTTgcg > 2:767922/1‑150 (MQ=255) gTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACcagca < 1:192245/141‑1 (MQ=40) gTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACcagca > 2:192245/1‑141 (MQ=255) ttCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGCTCTGCTCGGCCACCATCTGCGGCTAGAACGTTGCGATTTCCAGAAACGACTGCGCGACCAGCAGCTTGCGCTc < 1:1003816/150‑1 (MQ=14) gagaACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTTGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCAGCAGCTTGCGCTCGTTg > 1:554569/1‑150 (MQ=255) gagaACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCAGCAGCTTGCGCTCGTTg > 1:587272/1‑150 (MQ=255) gagaACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCAGCAGCTTGCGCTCGTTg > 2:51177/1‑150 (MQ=255) gagaACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCATGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGCTTTCCAGAAACAACTGCGCGACCAGCAGCTTGCGACCGTTg > 2:950595/1‑150 (MQ=14) agaACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCAGCAGCTTGCGCTCGTTGt < 2:587272/150‑1 (MQ=255) gaACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCAGCAGCTTGCGCTCGTTGTc < 1:1802587/150‑1 (MQ=255) gTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCAGCAGCTTGCGCTCGTTGTCGAcccc < 1:67974/150‑1 (MQ=255) gTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCACGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCAGCAGCTTGCGCTCGTTGTCGAcccc > 1:1566226/1‑150 (MQ=255) gATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCt < 2:1795334/92‑1 (MQ=255) gATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCt > 1:1795334/1‑92 (MQ=255) aTCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTcc > 2:1270720/1‑102 (MQ=255) aTCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTcc < 1:1270720/102‑1 (MQ=255) tctcGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCAGCAGCTTGCGCTCGTTGTCGACCCCGGGCt > 2:1170993/1‑150 (MQ=255) cGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCAGCAGCTTGCGCTCGTTGTCGACCCCGGGCTCca < 1:265351/150‑1 (MQ=255) gATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCAGCAGCTTGCGCTCGTTGTCGACCCCGGGCTCCACAg > 2:689263/1‑150 (MQ=255) aTGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCAGCAGCTTGCGCTCGTTGTCGACCCCGGGCTCCACAGt > 1:2325940/1‑150 (MQ=255) gTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCAGCAGCTTGCGCTCGTTGTCGACCCCGGGCTCCACAGTTCGCGCCAGCCACTg < 1:1170993/150‑1 (MQ=255) ggACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCAGCAGCt > 2:1858260/1‑99 (MQ=255) ggACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCAGCAGCt < 1:1858260/99‑1 (MQ=255) ggACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCAGCAGCTTGCGCTCGTTGTCGACCCCGGGCTCCACAGTTCGCGCCAGCCACTGGGttt > 1:1958649/1‑150 (MQ=255) ggACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCAGCAGCTTGCGCTCGTTGTCGACCACGGGCTCCACAGTTCGCGCCAGCCACTGGGttt > 2:787265/1‑150 (MQ=255) gACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCAGCAGCTTGCGCTCGTTGTCGACCCCGGGCTCCACAGTTCGCGCCAGCCACTGGGtttt > 1:734840/1‑150 (MQ=255) aCTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCAGCAGCTTGCGCTCGTTGTCGACCCCGGGCTCCACAGTTCGCGCCAGCCACTGGGTTTTc < 2:1875745/150‑1 (MQ=255) cTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGGAACGACTGCGCGACCAGCAGCTTGCGCTCGTTGTCGACCCCGGGCTCCACAGTTCGCGCCAGCCACTGGGTTTTca < 2:426637/150‑1 (MQ=255) tttttCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCAGCAGCTTGCGCTCGTTGTCGACCCCGGGCTCCACAGTTCGCGCCAGCCACTGGGTTTTcac > 1:1914123/1‑150 (MQ=255) ggCCATGACTTCGCGCTTGCCGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCAGCAGCTTGCGCTCGTTGTCGACCCCGGGCTCCACAGTTCGCGCCAGCCACTGGGTTTTCACATCCTc < 2:800162/150‑1 (MQ=255) gCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCAGCAGCTTGCGCTCGTTGTCGACCCCGGGCTCCACAGTTCGCGCCAGCCACTGGGTTTTCACATCCTCg > 1:2154698/1‑150 (MQ=255) aTGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCAGCAGCTTGCGCTCGTTGTCGACCCCGGGCTCCACAGTTCGCGCCAGCCACTGGGTTTTCACATCATCGACa > 1:1726301/1‑150 (MQ=255) ttCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCAGCAGCTTGCGCTCGTTGTCGACCCCGGGCTCCACAGTTCGCGCCAGCCACTGGGTTTTCACATCCTCGACAgcggc > 2:694445/1‑150 (MQ=255) gcgcTTGATGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGCAACGACTGCGCGACcagc < 1:2242097/73‑1 (MQ=255) gcgcTTGATGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACcagc > 2:2242097/1‑73 (MQ=255) ttGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCAGGAGCTTGCGCTCGTTGTCAACCACGGGCTCTACAGTTATCGCCAGCCAATGGGTTTTCAGAATCTCAACAGCGGCGTTgcgc > 2:1103197/1‑150 (MQ=255) ttGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCAGCAGCTTGCGCTCGTTGTCGACCCCGGGCTcc < 1:854041/99‑1 (MQ=255) ttGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCAGCAGCTTGCGCTCGTTGTCGACCCCGGGCTcc > 2:854041/1‑99 (MQ=255) ttGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCAGCAGCTTGCGCTCGTTGTCGACCCCGGGCTCCACAGTTCGCGCCAGCCACTGGGTTTTCACATCCTCGACAGCGGCGTTgcgc > 2:754932/1‑150 (MQ=255) ttGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCAGCAGCTTGCGCTCGTTGTCGACCCCGGGCTCCACAGTTCGCGCCAGCCACTGGGTTTTCACATCCTCGACAGCGGCGTTgcgc > 2:38545/1‑150 (MQ=255) gACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTAAGAATTACAAACACGACGGCGCGACCAGCAGCTTGCGCTCGTTGTCGACCCCGGGCGCCACAGTTCGCGCCAGCCACTGGGTTTTCGCATCCTCGACAGCGGCGTTGCGCCa > 1:1616366/1‑150 (MQ=255) cGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCAGCAGCTTGCGCTCGTTGTCGACCCCGGGCTCCACAGTTCGCGCCAGCCACTGGGTTTTCACATCCTCGACAGCGGCGTTGCGCCAgg > 2:2391990/1‑150 (MQ=255) | GACGCCGCGCTCGAACTGCGCCATGTGCGGCTTCATGCGTTCATCATGGGCATCGGCCTGTTGCCTGGCCCGTTCGGAGAACAAGTAGATCTCGGGATGCAGGTGGAGCTGGTTGCGGACTTTTTCGGCCATGACTTCGCGCTTGACGATCTGCTCGGCCACCATCTGCGGGTAGAGCTTTTCGATTTCCAGAAACGACTGCGCGACCAGCAGCTTGCGCTCGTTGTCGACCCCGGGCTCCACAGTTCGCGCCAGCCACTGGGTTTTCACATCCTCGACAGCGGCGTTGCGCCAGG > NC_002947/2362762‑2363057 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |